RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SPACA7Q96KW9 195 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 ZNF681Q96N22 645 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 NRTNQ99748 197 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 TRAF4Q9BUZ4 470 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-201ENST00000277198 C11orf54Q9H0W9 315 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-201ENST00000277198 RNF121Q9H920 327 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 ADAM30Q9UKF2 790 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 ZNF780BQ9Y6R6 833 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 SPEGQ15772 3267 aa12.05□□□□□ -0.48
C9orf3-201ENST00000277198 A0A0G2JN53 185 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 B4DXG7 233 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 AP3D1O14617 1153 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 CASKO14936 926 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 CLEC2LP0C7M8 214 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 ACP5P13686 325 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 MYL9P24844 172 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 TGM4P49221 684 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 TPMTP51580 245 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 MRPS15P82914 257 aaKnown RBP12.04□□□□□ -0.48
C9orf3-201ENST00000277198 LSM11P83369 360 aaKnown RBP eCLIP12.04□□□□□ -0.48
C9orf3-201ENST00000277198 CHRNEQ04844 493 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 CDK10Q15131 360 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 TBRG1Q3YBR2 411 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 PYDC2Q56P42 97 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 PLA2G2CQ5R387 149 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 AGBL4Q5VU57 503 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 MZT2BQ6NZ67 158 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 TMEM107Q6UX40 140 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 MBOAT2Q6ZWT7 520 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 DUSP18Q8NEJ0 188 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 OR2L3Q8NG85 312 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 ACOT12Q8WYK0 555 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 PPP1R3EQ9H7J1 279 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 PRDM9Q9NQV7 894 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 IMP3Q9NV31 184 aaKnown RBP12.04□□□□□ -0.48
C9orf3-201ENST00000277198 PHF11Q9UIL8 331 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 CLCA2Q9UQC9 943 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 RALGAPA1Q6GYQ0 2036 aa12.04□□□□□ -0.48
C9orf3-201ENST00000277198 TBC1D3KA0A087X1G2 549 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 TBC1D3FA6NER0 549 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 GLOD5A6NK44 160 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 PCDH8O95206 1070 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 YES1P07947 543 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 TCEA1P23193 301 aaKnown RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 CMPK1P30085 196 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 KRT33BQ14525 404 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 QPRTQ15274 297 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 CSRP2Q16527 193 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 RSPO4Q2I0M5 234 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 PGGHGQ32M88 737 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 UAP1L1Q3KQV9 507 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 TIGD3Q6B0B8 471 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 TBC1D3GQ6DHY5 549 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 TYW3Q6IPR3 259 aaKnown RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 C16orf62Q7Z3J2 963 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 NRROSQ86YC3 692 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 LIX1LQ8IVB5 337 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 PEX5LQ8IYB4 626 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 ASCC1Q8N9N2 400 aaKnown RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 C19orf18Q8NEA5 215 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 OR2T33Q8NG76 320 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 ENKURQ8TC29 256 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 DNAJA4Q8WW22 397 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 PIGKQ92643 395 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 SIPA1Q96FS4 1042 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 TOE1Q96GM8 510 aaKnown RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 C16orf58Q96GQ5 468 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 TM9SF2Q99805 663 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 YIPF4Q9BSR8 244 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 MTHFD2LQ9H903 347 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 CACYBPQ9HB71 228 aaKnown RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 SLC6A20Q9NP91 592 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 RBFOX1Q9NWB1 397 aaKnown RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 USP36Q9P275 1121 aaKnown RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 SERGEFQ9UGK8 458 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 KLHL21Q9UJP4 597 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 SLC17A4Q9Y2C5 497 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 GPR52Q9Y2T5 361 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 HEBP2Q9Y5Z4 205 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 SLCO1B1Q9Y6L6 691 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 CDH10Q9Y6N8 788 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 WASHC1A8K0Z3 465 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 PLA2G10O15496 165 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 SCO2O43819 266 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 SLC19A2O60779 497 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 ADH1BP00325 375 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 SLC2A2P11168 524 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 C5AR1P21730 350 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 MAOBP27338 520 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 RCVRNP35243 200 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 EVX1P49640 407 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 RNF144AP50876 292 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 RGS8P57771 180 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 TAB1Q15750 504 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 CST6Q15828 149 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.03□□□□□ -0.48
C9orf3-201ENST00000277198 FAM214AQ32MH5 1076 aa12.03□□□□□ -0.48
C9orf3-201ENST00000277198 TRIQKQ629K1 86 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms