RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 AKIRIN1Q9H9L7 192 aaPredicted RBP15.11■□□□□ 0.01
TPM1-201ENST00000267996 CTPS2Q9NRF8 586 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 SLC39A1Q9NY26 324 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 COPS7AQ9UBW8 275 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 ENOPH1Q9UHY7 261 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 NTNG1Q9Y2I2 539 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 OTOGLQ3ZCN5 2332 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 C2orf92A0A1B0GVN3 265 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 CPSF4LA6NMK7 179 aaKnown RBP15.1■□□□□ 0.01
TPM1-201ENST00000267996 TMX2-CTNND1H3BSU7 103 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 OR10H3O60404 316 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 SMNDC1O75940 238 aaKnown RBP eCLIP15.1■□□□□ 0.011e-8■■□□□ 11.9
TPM1-201ENST00000267996 PRG2P13727 222 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 HTR2AP28223 471 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 IFNA8P32881 189 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 INSM1Q01101 510 aaPredicted RBP15.1■□□□□ 0.01
TPM1-201ENST00000267996 SPEM2Q0P670 501 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 FGFBP1Q14512 234 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 CTU2Q2VPK5 515 aaKnown RBP15.1■□□□□ 0.01
TPM1-201ENST00000267996 FAAH2Q6GMR7 532 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 LAIR2Q6ISS4 152 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 KLHL17Q6TDP4 642 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 TMEM205Q6UW68 189 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 CD300LDQ6UXZ3 194 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 PLEKHM3Q6ZWE6 761 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 RANBP3LQ86VV4 465 aaPredicted RBP15.1■□□□□ 0.01
TPM1-201ENST00000267996 CMIPQ8IY22 773 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 C17orf47Q8NEP4 570 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 OR4K5Q8NGD3 323 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 CNOT9Q92600 299 aaKnown RBP15.1■□□□□ 0.01
TPM1-201ENST00000267996 PMEPA1Q969W9 287 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 GTPBP3Q969Y2 492 aaKnown RBP15.1■□□□□ 0.01
TPM1-201ENST00000267996 LMF1Q96S06 567 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 MRPS26Q9BYN8 205 aaKnown RBP15.1■□□□□ 0.01
TPM1-201ENST00000267996 HOXD1Q9GZZ0 328 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 AKAP7Q9P0M2 348 aaPredicted RBP15.1■□□□□ 0.01
TPM1-201ENST00000267996 REV1Q9UBZ9 1251 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 TESQ9UGI8 421 aaKnown RBP15.1■□□□□ 0.01
TPM1-201ENST00000267996 GMPPBQ9Y5P6 360 aa15.1■□□□□ 0.01
TPM1-201ENST00000267996 A0A087WUU8 490 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 DPPA5A6NC42 116 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 SAGE2PA6NJ88 616 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 TRIM64CA6NLI5 447 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 LCN1P31025 176 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 SLC5A2P31639 672 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 ESRRGP62508 458 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 FOXD4Q12950 439 aaPredicted RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 CSRP2Q16527 193 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 KLHL26Q53HC5 615 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 C6orf141Q5SZD1 244 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 C1orf94Q6P1W5 598 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 GDF7Q7Z4P5 450 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 ZER1Q7Z7L7 766 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 SLCO6A1Q86UG4 719 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 CCDC71Q8IV32 467 aaPredicted RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 OR4C3Q8NH37 302 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 METTL21AQ8WXB1 218 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 HDAC2Q92769 488 aaKnown RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 SLC38A4Q969I6 547 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 SLC41A3Q96GZ6 507 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 APOL4Q9BPW4 351 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 WDR77Q9BQA1 342 aaPredicted RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 UCK2Q9BZX2 261 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 STRADBQ9C0K7 418 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 WWTR1Q9GZV5 400 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 ING2Q9H160 280 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 DNAJB12Q9NXW2 375 aaKnown RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 NXT1Q9UKK6 140 aaKnown RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 PRKNO60260 465 aaPredicted RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 LRP3O75074 770 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 RFPL3O75679 317 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 LYPD3O95274 346 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 KLK3P07288 261 aaPredicted RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 GKN3PP0CG01 181 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 POU2F1P14859 743 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 GGT2P36268 569 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 ADH7P40394 386 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 UGT2B15P54855 530 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 TPD52P55327 224 aaPredicted RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 COX10Q12887 443 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 RBM48Q5RL73 367 aaKnown RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 FAM198BQ6UWH4 519 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 SLC29A4Q7RTT9 530 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 B3GNT7Q8NFL0 401 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 TSPAN14Q8NG11 270 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 ACOT11Q8WXI4 607 aaPredicted RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 CRB3Q9BUF7 120 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 ZNF223Q9UK11 482 aaPredicted RBP15.09■□□□□ 0.01
TPM1-201ENST00000267996 PCDHGA6Q9Y5G7 932 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 PCDHGA1Q9Y5H4 931 aa15.09■□□□□ 0.01
TPM1-201ENST00000267996 IGHV3-20A0A0C4DH32 117 aa15.08■□□□□ 0
TPM1-201ENST00000267996 TRAPPC13A5PLN9 417 aa15.08■□□□□ 0
TPM1-201ENST00000267996 SERINC4A6NH21 518 aa15.08■□□□□ 0
TPM1-201ENST00000267996 C4orf47A7E2U8 309 aa15.08■□□□□ 0
TPM1-201ENST00000267996 TFAP2AP05549 437 aa15.08■□□□□ 0
TPM1-201ENST00000267996 OSMP13725 252 aa15.08■□□□□ 0
TPM1-201ENST00000267996 MMP11P24347 488 aa15.08■□□□□ 0
TPM1-201ENST00000267996 ELK4P28324 431 aa15.08■□□□□ 0
TPM1-201ENST00000267996 ACAA2P42765 397 aaKnown RBP15.08■□□□□ 0
TPM1-201ENST00000267996 GTF2A1P52655 376 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms