RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 DACH2Q96NX9 599 aa8.65□□□□□ -1.03
SSR3-201ENST00000265044 C14orf105Q9NVL8 296 aa8.65□□□□□ -1.03
SSR3-201ENST00000265044 ZNF106Q9H2Y7 1883 aaKnown RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 AGAP5A6NIR3 686 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 NID1P14543 1247 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 MAP2K4P45985 399 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 GCGRP47871 477 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 ATP12AP54707 1039 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 CSNK2BP67870 215 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 SLC30A6Q6NXT4 461 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 PAPD4Q6PIY7 484 aaKnown RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 NKAIN4Q8IVV8 208 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 D2HGDHQ8N465 521 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 TMEM105Q8N8V8 129 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 SLC2A12Q8TD20 617 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 KLHL6Q8WZ60 621 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 OR1F2PQ96R84 312 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 NDEL1Q9GZM8 345 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 CARD8Q9Y2G2 431 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 OTX2P32243 289 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 TRHRP34981 398 aaPredicted RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 ST3GAL4Q11206 333 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 COX10Q12887 443 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 KEAP1Q14145 624 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 NCF4Q15080 339 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 CNPY1Q3B7I2 92 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 PWWP2BQ6NUJ5 590 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 WDR74Q6RFH5 385 aaPredicted RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 PSMA8Q8TAA3 256 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 C1orf216Q8TAB5 229 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 TMEM239Q8WW34 195 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 SLC46A1Q96NT5 459 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 CHST8Q9H2A9 424 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 METTL7AQ9H8H3 244 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 UBQLN4Q9NRR5 601 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 RIIAD1A6NNX1 92 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 EFCAB9A8MZ26 197 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 MEN1O00255 615 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 CDC40O60508 579 aaKnown RBP eCLIP8.64□□□□□ -1.03
SSR3-201ENST00000265044 RCBTB2O95199 551 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 CBX7O95931 251 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 MT-ND2P03891 347 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 ZGLP1P0C6A0 271 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 CCDC159P0C7I6 412 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 HOXB9P17482 250 aaPredicted RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 AVPR2P30518 371 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 GGT2P36268 569 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 OC90Q02509 493 aaPredicted RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 EEF1A2Q05639 463 aaKnown RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 MAD2L1BPQ15013 274 aaPredicted RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 NDUFAF6Q330K2 333 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 PROX2Q3B8N5 592 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 PRAMEF8Q5VWM4 474 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 PRAMEF7Q5VXH5 474 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 FAM199XQ6PEV8 388 aaPredicted RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 LANCL3Q6ZV70 420 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 OR14A16Q8NHC5 309 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 TMEM255BQ8WV15 326 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 OSTF1Q92882 214 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 LCORQ96JN0 433 aaPredicted RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 LRR1Q96L50 414 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 MBOAT4Q96T53 435 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 ZNF559Q9BR84 538 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 NXF5Q9H1B4 397 aaKnown RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 APMAPQ9HDC9 416 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 SEMA4GQ9NTN9 838 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 TOR4AQ9NXH8 423 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 GPR83Q9NYM4 423 aa8.64□□□□□ -1.03
SSR3-201ENST00000265044 TMEFF2Q9UIK5 374 aaPredicted RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 GPR55Q9Y2T6 319 aaPredicted RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 RPL36Q9Y3U8 105 aaKnown RBP8.64□□□□□ -1.03
SSR3-201ENST00000265044 A0A087WUU8 490 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 SH3PXD2BA1X283 911 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 A6NHS1 94 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 ZNF99A8MXY4 864 aaPredicted RBP8.63□□□□□ -1.03
SSR3-201ENST00000265044 PRSS23O95084 383 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 IGFBP1P08833 259 aaPredicted RBP8.63□□□□□ -1.03
SSR3-201ENST00000265044 STSP08842 583 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 TSPAN19P0C672 248 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 ITGAMP11215 1152 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 CRHBPP24387 322 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 ZBED5Q49AG3 693 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 KLHL17Q6TDP4 642 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 DGAT2L6Q6ZPD8 337 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 ZNF687Q8N1G0 1237 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 OR8J1Q8NGP2 316 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 ZNF675Q8TD23 568 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 IPCEF1Q8WWN9 437 aaPredicted RBP8.63□□□□□ -1.03
SSR3-201ENST00000265044 ZNF578Q96N58 590 aaPredicted RBP8.63□□□□□ -1.03
SSR3-201ENST00000265044 EGLN3Q9H6Z9 239 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 PRAMEF27A3QJZ7 478 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 C19orf67A6NJJ6 358 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 SLC16A6O15403 523 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 CPNE3O75131 537 aaKnown RBP8.63□□□□□ -1.03
SSR3-201ENST00000265044 IFNGP01579 166 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 HMGN1P05114 100 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 PRG2P13727 222 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 MMP11P24347 488 aa8.63□□□□□ -1.03
SSR3-201ENST00000265044 DUSP8Q13202 625 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms