RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 G6PC3Q9BUM1 346 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 FAM192AQ9GZU8 254 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 GUSBP08236 651 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 IGFBP1P08833 259 aaPredicted RBP20.66■□□□□ 0.9
SIX3-201ENST00000260653 POU1F1P28069 291 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 NUP107P57740 925 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 SMN1Q16637 294 aaKnown RBP20.66■□□□□ 0.9
SIX3-201ENST00000260653 TMEM236Q5W0B7 351 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 GDF7Q7Z4P5 450 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 RANBP3LQ86VV4 465 aaPredicted RBP20.66■□□□□ 0.9
SIX3-201ENST00000260653 MEX3DQ86XN8 651 aaKnown RBP20.66■□□□□ 0.9
SIX3-201ENST00000260653 CNOT9Q92600 299 aaKnown RBP20.66■□□□□ 0.9
SIX3-201ENST00000260653 SLC41A3Q96GZ6 507 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 SLC46A1Q96NT5 459 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 NUDT9Q9BW91 350 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 ENOPH1Q9UHY7 261 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 RNF6Q9Y252 685 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 KIF26BQ2KJY2 2108 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 COL5A1P20908 1838 aaPredicted RBP20.66■□□□□ 0.9
SIX3-201ENST00000260653 OR5F1O95221 314 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 CRISP1P54107 249 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 DCDP81605 110 aaKnown RBP20.66■□□□□ 0.9
SIX3-201ENST00000260653 OCA2Q04671 838 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 ZFP36L1Q07352 338 aaKnown RBP20.66■□□□□ 0.9
SIX3-201ENST00000260653 ZNF385CQ66K41 422 aaPredicted RBP20.66■□□□□ 0.9
SIX3-201ENST00000260653 AMER2Q8N7J2 671 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 GPA33Q99795 319 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 MESP1Q9BRJ9 268 aa20.66■□□□□ 0.9
SIX3-201ENST00000260653 NXF5Q9H1B4 397 aaKnown RBP20.66■□□□□ 0.9
SIX3-201ENST00000260653 NPIPB9F8W1W9 429 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 IFNA8P32881 189 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 ESRRGP62508 458 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 PLPP5Q8NEB5 264 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 OR14A16Q8NHC5 309 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 APH1BQ8WW43 257 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 DAZLQ92904 295 aaKnown RBP20.65■□□□□ 0.9
SIX3-201ENST00000260653 EFHD2Q96C19 240 aaPredicted RBP20.65■□□□□ 0.9
SIX3-201ENST00000260653 POLR2J3Q9H1A7 115 aaKnown RBP20.65■□□□□ 0.9
SIX3-201ENST00000260653 ARMC7Q9H6L4 198 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 PAK1IP1Q9NWT1 392 aaPredicted RBP20.65■□□□□ 0.9
SIX3-201ENST00000260653 SLC7A7Q9UM01 511 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 PCDHGA10Q9Y5H3 936 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 M0R129 80 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 WBP4O75554 376 aaKnown RBP20.65■□□□□ 0.9
SIX3-201ENST00000260653 OSMP13725 252 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 ALDH3B2P48448 385 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 LINC00471Q8N535 108 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 TMIGD2Q96BF3 282 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 GAL3ST4Q96RP7 486 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 PCDHGB2Q9Y5G2 931 aa20.65■□□□□ 0.9
SIX3-201ENST00000260653 ACP1P24666 158 aa20.64■□□□□ 0.9
SIX3-201ENST00000260653 PIGFQ07326 219 aa20.64■□□□□ 0.9
SIX3-201ENST00000260653 C1orf94Q6P1W5 598 aa20.64■□□□□ 0.9
SIX3-201ENST00000260653 ZNF773Q6PK81 442 aa20.64■□□□□ 0.9
SIX3-201ENST00000260653 ZNF730Q6ZMV8 503 aa20.64■□□□□ 0.9
SIX3-201ENST00000260653 BMPERQ8N8U9 685 aa20.64■□□□□ 0.9
SIX3-201ENST00000260653 AGBL5Q8NDL9 886 aa20.64■□□□□ 0.9
SIX3-201ENST00000260653 OR4C3Q8NH37 302 aa20.64■□□□□ 0.9
SIX3-201ENST00000260653 ZNF566Q969W8 418 aa20.64■□□□□ 0.9
SIX3-201ENST00000260653 ANKRD19PQ9H560 264 aa20.64■□□□□ 0.9
SIX3-201ENST00000260653 IGHV3-20A0A0C4DH32 117 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 ZAR1LA6NP61 321 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 FLRT2O43155 660 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 GP1BAP07359 652 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 HTR1AP08908 422 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 CCDC159P0C7I6 412 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 FGF5P12034 268 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 CCL4P13236 92 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 PTNP21246 168 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 DRD5P21918 477 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 KRT20P35900 424 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 PPICP45877 212 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 TOP3AQ13472 1001 aaPredicted RBP20.64■□□□□ 0.89
SIX3-201ENST00000260653 TRA2AQ13595 282 aaKnown RBP eCLIP20.64■□□□□ 0.89
SIX3-201ENST00000260653 ZNF141Q15928 474 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 LCN10Q6JVE6 187 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 C9orf40Q8IXQ3 194 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 TMEM255BQ8WV15 326 aa20.64■□□□□ 0.89
SIX3-201ENST00000260653 IDSB3KWA1 339 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 PTGES3LE9PB15 166 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 POLR1CO15160 346 aaPredicted RBP20.63■□□□□ 0.89
SIX3-201ENST00000260653 ADAM11O75078 769 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 TP53P04637 393 aaPredicted RBP20.63■□□□□ 0.89
SIX3-201ENST00000260653 ATP12AP54707 1039 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 OR1Q1Q15612 314 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.63■□□□□ 0.89
SIX3-201ENST00000260653 ADIPOR1Q96A54 375 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 RHNO1Q9BSD3 238 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 NRSN2Q9GZP1 204 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 DNAJB12Q9NXW2 375 aaKnown RBP20.63■□□□□ 0.89
SIX3-201ENST00000260653 CFL2Q9Y281 166 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 H3BN98 237 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 HBQ1P09105 142 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 GABARAPL2P60520 117 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 IL11RAQ14626 422 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 EBPQ15125 230 aaKnown RBP20.63■□□□□ 0.89
SIX3-201ENST00000260653 SF3A2Q15428 464 aaKnown RBP20.63■□□□□ 0.89
SIX3-201ENST00000260653 DECR1Q16698 335 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 PRICKLE2Q7Z3G6 844 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 C7orf57Q8NEG2 295 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms