RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 KIAA0895LQ68EN5 471 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 SLC16A12Q6ZSM3 486 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 MFSD9Q8NBP5 474 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 SLC22A18Q96BI1 424 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 RNFT2Q96EX2 444 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 JSRP1Q96MG2 331 aaPredicted RBP8.46□□□□□ -1.06
CKAP2-201ENST00000258607 DGAT2Q96PD7 388 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 CDCA3Q99618 268 aaPredicted RBP8.46□□□□□ -1.06
CKAP2-201ENST00000258607 ITPAQ9BY32 194 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 CHST8Q9H2A9 424 aa8.46□□□□□ -1.06
CKAP2-201ENST00000258607 AKIRIN1Q9H9L7 192 aaPredicted RBP8.46□□□□□ -1.06
CKAP2-201ENST00000258607 EFCAB10A6NFE3 127 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 CHURC1-FNTBB4DL54 471 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ADAM11O75078 769 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 APBB3O95704 486 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 BMP4P12644 408 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 APEHP13798 732 aaKnown RBP8.45□□□□□ -1.06
CKAP2-201ENST00000258607 PRPH2P23942 346 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 EIF1AXP47813 144 aaKnown RBP8.45□□□□□ -1.06
CKAP2-201ENST00000258607 FNTBP49356 437 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 NR0B1P51843 470 aaKnown RBP8.45□□□□□ -1.06
CKAP2-201ENST00000258607 TNFRSF17Q02223 184 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ARHGAP40Q5TG30 622 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 TCEAL6Q6IPX3 200 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 CBLN3Q6UW01 205 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ZNF836Q6ZNA1 936 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 SLC22A16Q86VW1 577 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 SVOPQ8N4V2 548 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 PIGXQ8TBF5 258 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 TCEAL3Q969E4 200 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 TRMT61AQ96FX7 289 aaKnown RBP8.45□□□□□ -1.06
CKAP2-201ENST00000258607 HRASLS5Q96KN8 279 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 DMRTB1Q96MA1 342 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 GABRG3Q99928 467 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ACTRT3Q9BYD9 372 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ZNF639Q9UID6 485 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 IFT52Q9Y366 437 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 MED13LQ71F56 2210 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 FREM3P0C091 2139 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 IGF2RP11717 2491 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 FAM221BA6H8Z2 402 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 URADA6NGE7 173 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 TVP23AA6NH52 213 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 C17orf105B2RV13 164 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 M0R082 166 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ARHGAP33O14559 1287 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 CASKO14936 926 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 HCRTR2O43614 444 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 HCN1O60741 890 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 HSD17B2P37059 387 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ETV5P41161 510 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ETV1P50549 477 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 BICRALQ6AI39 1079 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 OAFQ86UD1 273 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 CENPSQ8N2Z9 138 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ZNF433Q8N7K0 673 aaPredicted RBP8.45□□□□□ -1.06
CKAP2-201ENST00000258607 TTLQ8NG68 377 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 GAL3ST3Q96A11 431 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 TNFRSF13CQ96RJ3 184 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 SDF2Q99470 211 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 RAB11FIP5Q9BXF6 653 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 PTGFRNQ9P2B2 879 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 PADI2Q9Y2J8 665 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 THADAQ6YHU6 1953 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 A0A0B4J203 849 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 SH3PXD2BA1X283 911 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 SMAD9O15198 467 aaKnown RBP8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ZNHIT1O43257 154 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 CSTAP01040 98 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 RABIFP47224 123 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 HNRNPA0Q13151 305 aaKnown RBP8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ZNHIT3Q15649 155 aaPredicted RBP8.45□□□□□ -1.06
CKAP2-201ENST00000258607 CTF1Q16619 201 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 DGUOKQ16854 277 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 ALG10BQ5I7T1 473 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 THSD4Q6ZMP0 1018 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 WDR88Q6ZMY6 472 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 GDF7Q7Z4P5 450 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 KIF18BQ86Y91 864 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 DEPDC4Q8N2C3 294 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 OR51Q1Q8NH59 317 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 DNAJB8Q8NHS0 232 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 RHOXF1Q8NHV9 184 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 CEP76Q8TAP6 659 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 HPS1Q92902 700 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 NECTIN4Q96NY8 510 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 NFKBIL1Q9UBC1 381 aaPredicted RBP8.45□□□□□ -1.06
CKAP2-201ENST00000258607 CTSFQ9UBX1 484 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 KCNE5Q9UJ90 142 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 HEBP2Q9Y5Z4 205 aa8.45□□□□□ -1.06
CKAP2-201ENST00000258607 SPTBN1Q01082 2364 aaKnown RBP8.45□□□□□ -1.06
CKAP2-201ENST00000258607 A0A0J9YY10 115 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 A0A1W2PPC4 97 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 HYKKA2RU49 373 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 H0YJX3 145 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 H3BML4 177 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 AQP9O43315 295 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 SEMA3DO95025 777 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 HPRP00739 348 aa8.44□□□□□ -1.06
CKAP2-201ENST00000258607 CHRNB1P11230 501 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms