RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 WSB2Q9NYS7 404 aaPredicted RBP13.65□□□□□ -0.22
TRAFD1-201ENST00000257604 SHISA7A6NL88 538 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 CENPXA8MT69 81 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 CPNE3O75131 537 aaKnown RBP13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 ZIC2O95409 532 aaPredicted RBP13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 MAOAP21397 527 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 ANXA11P50995 505 aaKnown RBP13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 PRKCDQ05655 676 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 TDGQ13569 410 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 MAPK14Q16539 360 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 FBXO43Q4G163 708 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 RBM18Q96H35 190 aaKnown RBP13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 LRR1Q96L50 414 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 ZNF681Q96N22 645 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 ANKHQ9HCJ1 492 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 UCKL1Q9NWZ5 548 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 PEX16Q9Y5Y5 336 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 ARID1AO14497 2285 aa13.65□□□□□ -0.23
TRAFD1-201ENST00000257604 A0A087WUU8 490 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 CCR4P51679 360 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 CCDC58Q4VC31 144 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 ENTPD8Q5MY95 495 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 FAAH2Q6GMR7 532 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 ASCC1Q8N9N2 400 aaKnown RBP13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 MGLLQ99685 303 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 PITX2Q99697 317 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 SLC30A2Q9BRI3 323 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 SPATA5L1Q9BVQ7 753 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 NLGN3Q9NZ94 848 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 A6NCN8 305 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 PRKYO43930 277 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 KCNJ13O60928 360 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 CLEC2LP0C7M8 214 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 SOX6P35712 828 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 NDUFAF6Q330K2 333 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 TUBA3EQ6PEY2 450 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 POMZP3Q6PJE2 187 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 ZAR1Q86SH2 424 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 DENND6BQ8NEG7 585 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 PCNPQ8WW12 178 aaKnown RBP13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 KLHL6Q8WZ60 621 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 AHCYL2Q96HN2 611 aaKnown RBP13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 FBRSQ9HAH7 460 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 FSCN3Q9NQT6 498 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 SLC7A7Q9UM01 511 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 KNTC1P50748 2209 aa13.64□□□□□ -0.23
TRAFD1-201ENST00000257604 A0A0J9YY10 115 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 CHST10O43529 356 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 GPX5O75715 221 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 UBXN7O94888 489 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 WNT1P04628 370 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 CHRNB1P11230 501 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 OSMP13725 252 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 GNSP15586 552 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 ZNF10P21506 573 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 TEAD1P28347 426 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 OR1D4P47884 311 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 ARL4DP49703 201 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 MFSD12Q6NUT3 480 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 ZNF517Q6ZMY9 492 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 PEX5LQ8IYB4 626 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 ZFPM2Q8WW38 1151 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 FCGR1BQ92637 280 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 PTCHD1Q96NR3 888 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 SERINC2Q96SA4 455 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 GABARAPL3Q9BY60 117 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 LYARQ9NX58 379 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 TAS2R7Q9NYW3 318 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 A0A1W2PPC4 97 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 SLC35F4A4IF30 521 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 ARHGAP33O14559 1287 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 IFNA8P32881 189 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 ARPC4P59998 168 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 YPEL5P62699 121 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 TRA2BP62995 288 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 PUS10Q3MIT2 529 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 TYW3Q6IPR3 259 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 ZNF544Q6NX49 715 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 MCATQ8IVS2 390 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 ZNF655Q8N720 491 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 BAHD1Q8TBE0 780 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 POP5Q969H6 163 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 PITHD1Q9GZP4 211 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 PRDM6Q9NQX0 595 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 USP36Q9P275 1121 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 DHCR7Q9UBM7 475 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 PHF11Q9UIL8 331 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 CSNK1G3Q9Y6M4 447 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 MED12Q93074 2177 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 EFCAB10A6NFE3 127 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 SLC2A10O95528 541 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 HOXB6P17509 224 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 RPS19P39019 145 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 Q5BKY6 102 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 LHFPL3Q86UP9 236 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 IQCF2Q8IXL9 164 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 UBQLNLQ8IYU4 475 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 ARL14Q8N4G2 192 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 OR52R1Q8NGF1 315 aa13.63□□□□□ -0.23
TRAFD1-201ENST00000257604 OR51A7Q8NH64 312 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms