RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 TMCC3Q9ULS5 477 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 CLCA3PQ9Y6N3 262 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 BCAS1O75363 584 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-201ENST00000254816 NTN1O95631 604 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 AK1P00568 194 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF883P0CG24 379 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 LSM11P83369 360 aaKnown RBP eCLIP17.49■□□□□ 0.39
TRIM47-201ENST00000254816 EMX1Q04741 257 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-201ENST00000254816 BIKQ13323 160 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 NKAIN1Q4KMZ8 207 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 STT3BQ8TCJ2 826 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF566Q969W8 418 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 MESP1Q9BRJ9 268 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 NDRG4Q9ULP0 352 aaKnown RBP17.49■□□□□ 0.39
TRIM47-201ENST00000254816 DBIP07108 87 aaKnown RBP17.49■□□□□ 0.39
TRIM47-201ENST00000254816 CBLP22681 906 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 SLC37A1P57057 533 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 TAS2R41P59536 307 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 AQP6Q13520 282 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 SPCS2Q15005 226 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 CCDC157Q569K6 752 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 MRPL2Q5T653 305 aaKnown RBP17.49■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF770Q6IQ21 691 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-201ENST00000254816 SLC16A12Q6ZSM3 486 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF614Q8N883 585 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 SLC2A12Q8TD20 617 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 FAR1Q8WVX9 515 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 FKBP10Q96AY3 582 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 LMF1Q96S06 567 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 C11orf16Q9NQ32 467 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 SEMA4GQ9NTN9 838 aa17.49■□□□□ 0.39
TRIM47-201ENST00000254816 CFAP54Q96N23 3096 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 GALR2O43603 387 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-201ENST00000254816 OR10H3O60404 316 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 DDAH2O95865 285 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 THBS1P07996 1170 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 CCNYL3P0C7X3 344 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 GKN3PP0CG01 181 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 ITIH1P19827 911 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 ENTPD8Q5MY95 495 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 LCN10Q6JVE6 187 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 PODNL1Q6PEZ8 512 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 CCDC81Q6ZN84 652 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 PARP8Q8N3A8 854 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 APOL4Q9BPW4 351 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 Q9N2J8 555 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 OR10H1Q9Y4A9 318 aa17.48■□□□□ 0.39
TRIM47-201ENST00000254816 BCL10O95999 233 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 ZGLP1P0C6A0 271 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 CCL4P13236 92 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 PRG2P13727 222 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 NID1P14543 1247 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 ACP1P24666 158 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 RPP38P78345 283 aaKnown RBP17.47■□□□□ 0.39
TRIM47-201ENST00000254816 ZFP36L1Q07352 338 aaKnown RBP17.47■□□□□ 0.39
TRIM47-201ENST00000254816 TMED1Q13445 227 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 ELAVL1Q15717 326 aaKnown RBP17.47■□□□□ 0.39
TRIM47-201ENST00000254816 PDZK1Q5T2W1 519 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 NLGN4XQ8N0W4 816 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 ZSCAN1Q8NBB4 408 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF721Q8TF20 911 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 MCHR1Q99705 422 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 FUZQ9BT04 418 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 GABARAPL3Q9BY60 117 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 AKIRIN1Q9H9L7 192 aaPredicted RBP17.47■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF556Q9HAH1 456 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 CBLCQ9ULV8 474 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 POFUT2Q9Y2G5 429 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 IGHV3-20A0A0C4DH32 117 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 ANKRD33BA6NCL7 494 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF99A8MXY4 864 aaPredicted RBP17.47■□□□□ 0.39
TRIM47-201ENST00000254816 CDX4O14627 284 aaPredicted RBP17.47■□□□□ 0.39
TRIM47-201ENST00000254816 MAGEB3O15480 346 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 FLRT2O43155 660 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 MAD2L1BPQ15013 274 aaPredicted RBP17.47■□□□□ 0.39
TRIM47-201ENST00000254816 BCORP1Q8N888 145 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 OR7G1Q8NGA0 311 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 PMEPA1Q969W9 287 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 PSD2Q9BQI7 771 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 NUDT9Q9BW91 350 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 GPN2Q9H9Y4 310 aaPredicted RBP17.47■□□□□ 0.39
TRIM47-201ENST00000254816 PRODH2Q9UF12 536 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 PCDHGB2Q9Y5G2 931 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 PCDHGA10Q9Y5H3 936 aa17.47■□□□□ 0.39
TRIM47-201ENST00000254816 A0A1W2PRQ8 180 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 SH3PXD2BA1X283 911 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 FAAHO00519 579 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 AP3D1O14617 1153 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 FAM20BO75063 409 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF28P17035 718 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 KRT20P35900 424 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 MLLT10P55197 1068 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 SMIM11AP58511 58 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 SLC35A2P78381 396 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 DCDP81605 110 aaKnown RBP17.46■□□□□ 0.39
TRIM47-201ENST00000254816 PLAURQ03405 335 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 OCA2Q04671 838 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 DGCR6Q14129 220 aa17.46■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF385CQ66K41 422 aaPredicted RBP17.46■□□□□ 0.39
TRIM47-201ENST00000254816 KLHL17Q6TDP4 642 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms