RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 TBC1D3Q8IZP1 549 aaPredicted RBP15.3■□□□□ 0.04
HOXD3-201ENST00000249440 Q8N402 240 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 SAMD8Q96LT4 415 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 RIPOR3Q96MK2 946 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 SERINC2Q96SA4 455 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 ATF6BQ99941 703 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 SOSTQ9BQB4 213 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 MKRN2Q9H000 416 aaKnown RBP15.3■□□□□ 0.04
HOXD3-201ENST00000249440 NKX2-4Q9H2Z4 354 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 PPP1R3EQ9H7J1 279 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 SYNDIG1Q9H7V2 258 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 HINT3Q9NQE9 182 aaKnown RBP15.3■□□□□ 0.04
HOXD3-201ENST00000249440 PTGFRNQ9P2B2 879 aa15.3■□□□□ 0.04
HOXD3-201ENST00000249440 SLC31A1O15431 190 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 HPGDSO60760 199 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 HLA-DQB1P01920 261 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 THBS1P07996 1170 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 KIR2DL3P43628 341 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 DUSP5Q16690 384 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 UTS2BQ765I0 119 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 CXXC5Q7LFL8 322 aaKnown RBP15.29■□□□□ 0.04
HOXD3-201ENST00000249440 GID4Q8IVV7 300 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 TP53INP1Q96A56 240 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 OTULINQ96BN8 352 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 DCLRE1CQ96SD1 692 aaKnown RBP15.29■□□□□ 0.04
HOXD3-201ENST00000249440 SDF2Q99470 211 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 UBQLN3Q9H347 655 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 SRMSQ9H3Y6 488 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 KCMF1Q9P0J7 381 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 TRIOO75962 3097 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 URADA6NGE7 173 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 CSF2P04141 144 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 EVX1P49640 407 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 SEC13P55735 322 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 EEF1A1P68104 462 aaKnown RBP15.29■□□□□ 0.04
HOXD3-201ENST00000249440 QPRTQ15274 297 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 GPR68Q15743 365 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 FBXO42Q6P3S6 717 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 DGLUCYQ7Z3D6 616 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 KLBQ86Z14 1044 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 GALNT12Q8IXK2 581 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 OR51G2Q8NGK0 314 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 SLC7A6Q92536 515 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 ADAM30Q9UKF2 790 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 PCDHGB7Q9Y5F8 929 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 SCN2AQ99250 2005 aa15.29■□□□□ 0.04
HOXD3-201ENST00000249440 DOCK8Q8NF50 2099 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 A8MV72 311 aaPredicted RBP15.28■□□□□ 0.04
HOXD3-201ENST00000249440 SOCS6O14544 535 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 BMP7P18075 431 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 RNF144AP50876 292 aaPredicted RBP15.28■□□□□ 0.04
HOXD3-201ENST00000249440 ADPRHP54922 357 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 BDH1Q02338 343 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 MADCAM1Q13477 382 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 COL9A2Q14055 689 aaPredicted RBP15.28■□□□□ 0.04
HOXD3-201ENST00000249440 IL18Q14116 193 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 DEFB134Q4QY38 66 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 PLET1Q6UQ28 207 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 USP53Q70EK8 1073 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 OR4N5Q8IXE1 308 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 RNF113BQ8IZP6 322 aaKnown RBP15.28■□□□□ 0.04
HOXD3-201ENST00000249440 UBE2J2Q8N2K1 259 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 SIRT6Q8N6T7 355 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 OR52L1Q8NGH7 329 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 BRIX1Q8TDN6 353 aaKnown RBP15.28■□□□□ 0.04
HOXD3-201ENST00000249440 OR52D1Q9H346 318 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 PIGUQ9H490 435 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 DAPP1Q9UN19 280 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 TRAPPC13A5PLN9 417 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 UNC119BA6NIH7 251 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 FAM183AA6NL82 134 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 J3QRE1 110 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 NARSO43776 548 aaKnown RBP15.28■□□□□ 0.04
HOXD3-201ENST00000249440 B3GALT2O43825 422 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 EML2O95834 649 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 ZNF136P52737 540 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 SIM1P81133 766 aaPredicted RBP15.28■□□□□ 0.04
HOXD3-201ENST00000249440 ITPRIPL2Q3MIP1 535 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 EOGTQ5NDL2 527 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 MZT2BQ6NZ67 158 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 ACBD7Q8N6N7 88 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 SIMC1Q8NDZ2 872 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 FAM131CQ96AQ9 280 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 TM4SF19Q96DZ7 209 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 DMRTB1Q96MA1 342 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 CD180Q99467 661 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 KCNN2Q9H2S1 579 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 FN3KQ9H479 309 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 PRDM9Q9NQV7 894 aa15.28■□□□□ 0.04
HOXD3-201ENST00000249440 SHISA3A0PJX4 238 aa15.27■□□□□ 0.04
HOXD3-201ENST00000249440 CD8B2A6NJW9 211 aa15.27■□□□□ 0.04
HOXD3-201ENST00000249440 NCR1O76036 304 aa15.27■□□□□ 0.04
HOXD3-201ENST00000249440 DBIP07108 87 aaKnown RBP15.27■□□□□ 0.04
HOXD3-201ENST00000249440 SMIM10L1P0DMW3 83 aa15.27■□□□□ 0.04
HOXD3-201ENST00000249440 PRKAR1AP10644 381 aa15.27■□□□□ 0.04
HOXD3-201ENST00000249440 CD8BP10966 210 aa15.27■□□□□ 0.04
HOXD3-201ENST00000249440 CPMP14384 443 aa15.27■□□□□ 0.04
HOXD3-201ENST00000249440 ZNF10P21506 573 aaPredicted RBP15.27■□□□□ 0.04
HOXD3-201ENST00000249440 GDI1P31150 447 aa15.27■□□□□ 0.04
HOXD3-201ENST00000249440 MLLT3P42568 568 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms