RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CUTCQ9NTM9 273 aa17.13■□□□□ 0.33
HOXC11-201ENST00000243082 HSD11B2P80365 405 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 BNC1Q01954 994 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 DOC2BQ14184 412 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 NCF4Q15080 339 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 SNAPC1Q16533 368 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 MOGQ16653 247 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 PDZK1Q5T2W1 519 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 TSSK4Q6SA08 328 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 CARFQ8N187 725 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 CACTIN-AS1Q8N1I8 211 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 LRR1Q96L50 414 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 CNPPD1Q9BV87 410 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 ARMC7Q9H6L4 198 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 IL20Q9NYY1 176 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 NLGN3Q9NZ94 848 aa17.12■□□□□ 0.33
HOXC11-201ENST00000243082 C19orf67A6NJJ6 358 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 TMEM150CB9EJG8 249 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 CDC42EP2O14613 210 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 PRAMEF2O60811 474 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 OR2B3O76000 313 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 GNSP15586 552 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 CSF2RBP32927 897 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 NR1D2Q14995 579 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 ARMCX4Q5H9R4 360 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 TTLL10Q6ZVT0 673 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF367Q7RTV3 350 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 PLXDC1Q8IUK5 500 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 Q8N9G6 341 aaPredicted RBP17.11■□□□□ 0.33
HOXC11-201ENST00000243082 RCBTB1Q8NDN9 531 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 CNOT9Q92600 299 aaKnown RBP17.11■□□□□ 0.33
HOXC11-201ENST00000243082 TMEM80Q96HE8 168 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF582Q96NG8 517 aaPredicted RBP17.11■□□□□ 0.33
HOXC11-201ENST00000243082 PLGRKTQ9HBL7 147 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 LANCL2Q9NS86 450 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 TESQ9UGI8 421 aaKnown RBP17.11■□□□□ 0.33
HOXC11-201ENST00000243082 ERVK-19Q9WJR5 959 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 M0R3G1 203 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 DUX1O43812 170 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 CT45A8P0DMV1 189 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 CT45A9P0DMV2 189 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 PTNP21246 168 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 TGFBR1P36897 503 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 PGDP52209 483 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 CT45A2Q5DJT8 189 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF615Q8N8J6 731 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 C16orf52Q8NHV5 167 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 WDR36Q8NI36 951 aaKnown RBP17.11■□□□□ 0.33
HOXC11-201ENST00000243082 TMEM163Q8TC26 289 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 DYNC2LI1Q8TCX1 351 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 ARSGQ96EG1 525 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF578Q96N58 590 aaPredicted RBP17.11■□□□□ 0.33
HOXC11-201ENST00000243082 OR10A5Q9H207 317 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 SEMA5BQ9P283 1151 aa17.11■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF223Q9UK11 482 aaPredicted RBP17.11■□□□□ 0.33
HOXC11-201ENST00000243082 ASXL3Q9C0F0 2248 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 EFCAB9A8MZ26 197 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 CLPSP04118 112 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 IFNA16P05015 189 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 ATXN8OSP0DMR3 200 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 GADD45AP24522 165 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 CSTF2P33240 577 aaKnown RBP eCLIP17.1■□□□□ 0.33
HOXC11-201ENST00000243082 GALNSP34059 522 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 GRK5P34947 590 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 GCGRP47871 477 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 RGS6P49758 472 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 SERTAD2Q14140 314 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 CLEC12AQ5QGZ9 265 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 SNAP47Q5SQN1 464 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF620Q6ZNG0 422 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 D2HGDHQ8N465 521 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 OR1L3Q8NH93 324 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.1■□□□□ 0.33
HOXC11-201ENST00000243082 OSTF1Q92882 214 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 ELF4Q99607 663 aaPredicted RBP17.1■□□□□ 0.33
HOXC11-201ENST00000243082 CLEC2DQ9UHP7 191 aa17.1■□□□□ 0.33
HOXC11-201ENST00000243082 NPIPB9F8W1W9 429 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 AIREO43918 545 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 OR1D4P47884 311 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 ARL4DP49703 201 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 BMXP51813 675 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 GPLD1P80108 840 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 MED22Q15528 200 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 PRAMEF17Q5VTA0 474 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 SLCO6A1Q86UG4 719 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 C11orf74Q86VG3 221 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 GRAMD2AQ8IUY3 354 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 RNF113BQ8IZP6 322 aaKnown RBP17.09■□□□□ 0.33
HOXC11-201ENST00000243082 OR4Q3Q8NH05 313 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 TMEM239Q8WW34 195 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 MGLLQ99685 303 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 EVA1AQ9H8M9 152 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 LSM2Q9Y333 95 aaKnown RBP17.09■□□□□ 0.33
HOXC11-201ENST00000243082 MN1Q10571 1320 aaPredicted RBP17.09■□□□□ 0.33
HOXC11-201ENST00000243082 MYO15AQ9UKN7 3530 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 ADAM11O75078 769 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 HSMCR30P0CW71 290 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 FOLR1P15328 257 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 ALAS2P22557 587 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 RGS19P49795 217 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms