RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 GKN3PP0CG01 181 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 RFX3P48380 749 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 DHPSP49366 369 aaPredicted RBP21.55■■□□□ 1.04
MSX2-201ENST00000239243 PGDP52209 483 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 ACSM5Q6NUN0 579 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 TBC1D15Q8TC07 691 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 SLC41A2Q96JW4 573 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 PLA2G12AQ9BZM1 189 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 PRDM6Q9NQX0 595 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 IL20Q9NYY1 176 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 HRKO00198 91 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 KLF4O43474 513 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 DBTP11182 482 aaKnown RBP21.55■■□□□ 1.04
MSX2-201ENST00000239243 PRG2P13727 222 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 HTR2AP28223 471 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 EFNB1P98172 346 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 CFHR1Q03591 330 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 ZNF613Q6PF04 617 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 C11orf74Q86VG3 221 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 Q8N9G6 341 aaPredicted RBP21.55■■□□□ 1.04
MSX2-201ENST00000239243 OR7G1Q8NGA0 311 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 TMEM80Q96HE8 168 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 SH3GL3Q99963 347 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 NDC1Q9BTX1 674 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 DUSP23Q9BVJ7 150 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 TMEM27Q9HBJ8 222 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.55■■□□□ 1.04
MSX2-201ENST00000239243 SUSD2Q9UGT4 822 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 MAU2Q9Y6X3 613 aa21.55■■□□□ 1.04
MSX2-201ENST00000239243 PCDH15Q96QU1 1955 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 M0R3G1 203 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 DYRK3O43781 588 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 PTHP01270 115 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 ALAS2P22557 587 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 MLLT1Q03111 559 aaPredicted RBP21.54■■□□□ 1.04
MSX2-201ENST00000239243 ZNF91Q05481 1191 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 PDZK1Q5T2W1 519 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 YOD1Q5VVQ6 348 aaPredicted RBP21.54■■□□□ 1.04
MSX2-201ENST00000239243 ZAR1Q86SH2 424 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 CYP4Z2PQ8N1L4 340 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 C16orf52Q8NHV5 167 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 PRSS27Q9BQR3 290 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 TBC1D23Q9NUY8 699 aa21.54■■□□□ 1.04
MSX2-201ENST00000239243 M0R082 166 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 CLPXO76031 633 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 CSF2RBP32927 897 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 OCA2Q04671 838 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 SHBQ15464 509 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 ZNF141Q15928 474 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 SYT14P1Q58G82 188 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 SNAP47Q5SQN1 464 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 ZC3H14Q6PJT7 736 aaKnown RBP21.53■■□□□ 1.04
MSX2-201ENST00000239243 TSSK4Q6SA08 328 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 ZNF614Q8N883 585 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 TMEM163Q8TC26 289 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 LRR1Q96L50 414 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 PTCHD1Q96NR3 888 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 YIPF2Q9BWQ6 316 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 TSSK6Q9BXA6 273 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 DSN1Q9H410 356 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 LANCL2Q9NS86 450 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 SERTAD3Q9UJW9 196 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 SPTBP11277 2137 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 IRGMA1A4Y4 181 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 CSTF2P33240 577 aaKnown RBP eCLIP21.53■■□□□ 1.04
MSX2-201ENST00000239243 LIPAP38571 399 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 GPR4P46093 362 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 RNLSQ5VYX0 342 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 NPSR1Q6W5P4 371 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 CMIPQ8IY22 773 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 ZNF615Q8N8J6 731 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 POGLUT1Q8NBL1 392 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 RCBTB1Q8NDN9 531 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 OR1L3Q8NH93 324 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 WDR36Q8NI36 951 aaKnown RBP21.53■■□□□ 1.04
MSX2-201ENST00000239243 TMEM239Q8WW34 195 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 RACGAP1Q9H0H5 632 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 MUTYHQ9UIF7 546 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 CBLCQ9ULV8 474 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 TMEM5Q9Y2B1 443 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 DTX4Q9Y2E6 619 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 OR10H1Q9Y4A9 318 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 CDH10Q9Y6N8 788 aa21.53■■□□□ 1.04
MSX2-201ENST00000239243 PNLIPP16233 465 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 DSG2Q14126 1118 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 MOGQ16653 247 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 TMEM44Q2T9K0 475 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 ZNF620Q6ZNG0 422 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 QSOX2Q6ZRP7 698 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 SLC46A3Q7Z3Q1 461 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 WDR5BQ86VZ2 330 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 MEX3DQ86XN8 651 aaKnown RBP21.52■■□□□ 1.04
MSX2-201ENST00000239243 OR4N2Q8NGD1 307 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 OR8D4Q8NGM9 314 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 DTNBP1Q96EV8 351 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 PLGRKTQ9HBL7 147 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 MED17Q9NVC6 651 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 ERGIC3Q9Y282 383 aa21.52■■□□□ 1.04
MSX2-201ENST00000239243 TOX3O15405 576 aaPredicted RBP21.52■■□□□ 1.04
MSX2-201ENST00000239243 IGKV1D-16P01601 117 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms