RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 HMGN1P05114 100 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 NDUFV2P19404 249 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 PTNP21246 168 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 SDHBP21912 280 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 PAICSP22234 425 aaKnown RBP14.48□□□□□ -0.09
DDX55-201ENST00000238146 GCGRP47871 477 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 ZNF81P51508 661 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 CLCNKAP51800 687 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 STXBP1P61764 594 aaKnown RBP14.48□□□□□ -0.09
DDX55-201ENST00000238146 COL9A2Q14055 689 aaPredicted RBP14.48□□□□□ -0.09
DDX55-201ENST00000238146 SLC25A35Q3KQZ1 300 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 CLLU1Q5K131 121 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 C6orf132Q5T0Z8 1188 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 PXDC1Q5TGL8 231 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 PRAMEF8Q5VWM4 474 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 PRAMEF7Q5VXH5 474 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 BHLHB9Q6PI77 547 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 TMCO2Q7Z6W1 182 aaPredicted RBP14.48□□□□□ -0.09
DDX55-201ENST00000238146 KIAA0907Q7Z7F0 614 aaPredicted RBP14.48□□□□□ -0.09
DDX55-201ENST00000238146 SIAH3Q8IW03 269 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 TOMM5Q8N4H5 51 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 OR8K5Q8NH50 307 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 OR5W2Q8NH69 310 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 CNRIP1Q96F85 164 aaPredicted RBP14.48□□□□□ -0.09
DDX55-201ENST00000238146 UBQLN3Q9H347 655 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 MED20Q9H944 212 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 PCDH10Q9P2E7 1040 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 ENTPD4Q9Y227 616 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 KIAA1549LQ6ZVL6 1849 aa14.48□□□□□ -0.09
DDX55-201ENST00000238146 A0A1W2PPV9 198 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 CCR6P51684 374 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 HSF2Q03933 536 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 TGM3Q08188 693 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 ST3GAL2Q16842 350 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 GSG1Q2KHT4 349 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 KLHL12Q53G59 568 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 RNASE12Q5GAN4 147 aaKnown RBP14.47□□□□□ -0.09
DDX55-201ENST00000238146 CDC73Q6P1J9 531 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 TMEM65Q6PI78 240 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 GDF7Q7Z4P5 450 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 BEST4Q8NFU0 473 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 SFXN5Q8TD22 340 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 ADAMTS14Q8WXS8 1223 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 MSANTD3Q96H12 275 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 OR7D2Q96RA2 312 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 C12orf10Q9HB07 376 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 TRIM36Q9NQ86 728 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 PRKAG2Q9UGJ0 569 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 GOLGA4Q13439 2230 aaKnown RBP14.47□□□□□ -0.09
DDX55-201ENST00000238146 MEIKINA0A087WXM9 373 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 IFNA7P01567 189 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 STATHP02808 62 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 C8orf89P0DMQ9 161 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 SOX9P48436 509 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 SRP54P61011 504 aaKnown RBP14.47□□□□□ -0.09
DDX55-201ENST00000238146 E2F1Q01094 437 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 ARHGAP19Q14CB8 494 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 AANATQ16613 207 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 PLEKHM3Q6ZWE6 761 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 MBOAT2Q6ZWT7 520 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 ADCK2Q7Z695 626 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 ZNF687Q8N1G0 1237 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 MENTQ9BUN1 341 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 EQTNQ9NQ60 294 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 DLL4Q9NR61 685 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 SLC23A2Q9UGH3 650 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 TMEM5Q9Y2B1 443 aa14.47□□□□□ -0.09
DDX55-201ENST00000238146 ZGLP1P0C6A0 271 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 SULT1A3P0DMM9 295 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 SULT1A4P0DMN0 295 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 DNASE1P24855 282 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 RGS8P57771 180 aaPredicted RBP14.46□□□□□ -0.09
DDX55-201ENST00000238146 DGCR2P98153 550 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 TAGLNQ01995 201 aaKnown RBP14.46□□□□□ -0.09
DDX55-201ENST00000238146 NIPAL3Q6P499 406 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 CEACAM19Q7Z692 300 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 TPRA1Q86W33 373 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 GID4Q8IVV7 300 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 SLC41A3Q96GZ6 507 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 RBP7Q96R05 134 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 MCHR1Q99705 422 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 FAIM2Q9BWQ8 316 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 HCAR1Q9BXC0 346 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 CLEC4MQ9H2X3 399 aaPredicted RBP14.46□□□□□ -0.09
DDX55-201ENST00000238146 KLHL31Q9H511 634 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 MAFFQ9ULX9 164 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 CLEC4AQ9UMR7 237 aa14.46□□□□□ -0.09
DDX55-201ENST00000238146 A0A1B0GVI7 797 aa14.46□□□□□ -0.1
DDX55-201ENST00000238146 DAPL1A0PJW8 107 aa14.46□□□□□ -0.1
DDX55-201ENST00000238146 LRIT2A6NDA9 550 aa14.46□□□□□ -0.1
DDX55-201ENST00000238146 ZIC2O95409 532 aaPredicted RBP14.46□□□□□ -0.1
DDX55-201ENST00000238146 CFDP00746 253 aaPredicted RBP14.46□□□□□ -0.1
DDX55-201ENST00000238146 C6P13671 934 aa14.46□□□□□ -0.1
DDX55-201ENST00000238146 CSNK1G2P78368 415 aa14.46□□□□□ -0.1
DDX55-201ENST00000238146 ZNF267Q14586 743 aaPredicted RBP14.46□□□□□ -0.1
DDX55-201ENST00000238146 MEPCEQ7L2J0 689 aaKnown RBP14.46□□□□□ -0.1
DDX55-201ENST00000238146 GPALPP1Q8IXQ4 340 aa14.46□□□□□ -0.1
DDX55-201ENST00000238146 PIAS4Q8N2W9 510 aaPredicted RBP14.46□□□□□ -0.1
DDX55-201ENST00000238146 OR56A1Q8NGH5 318 aa14.46□□□□□ -0.1
DDX55-201ENST00000238146 OR5K2Q8NHB8 316 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms