RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 RAF1P04049 648 aa13.03□□□□□ -0.32
HCFC2-201ENST00000229330 GJA1P17302 382 aa13.03□□□□□ -0.32
HCFC2-201ENST00000229330 RNF144AP50876 292 aaPredicted RBP13.03□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF140P52738 457 aaPredicted RBP13.03□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.03□□□□□ -0.32
HCFC2-201ENST00000229330 C18orf63Q68DL7 685 aa13.03□□□□□ -0.32
HCFC2-201ENST00000229330 RNF111Q6ZNA4 994 aa13.03□□□□□ -0.32
HCFC2-201ENST00000229330 COMTD1Q86VU5 262 aa13.03□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF280BQ86YH2 543 aa13.03□□□□□ -0.32
HCFC2-201ENST00000229330 TRAM1L1Q8N609 369 aa13.03□□□□□ -0.32
HCFC2-201ENST00000229330 ZNF566Q969W8 418 aa13.03□□□□□ -0.32
HCFC2-201ENST00000229330 LRRC46Q96FV0 321 aa13.03□□□□□ -0.32
HCFC2-201ENST00000229330 SULT4A1Q9BR01 284 aa13.03□□□□□ -0.32
HCFC2-201ENST00000229330 PINK1Q9BXM7 581 aa13.03□□□□□ -0.32
HCFC2-201ENST00000229330 DIMT1Q9UNQ2 313 aaKnown RBP13.03□□□□□ -0.32
HCFC2-201ENST00000229330 PRKCAP17252 672 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 TGFBR1P36897 503 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 CD79BP40259 229 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 ETV3P41162 512 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 GZMKP49863 264 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 GATMP50440 423 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 CAPZA1P52907 286 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 CATSPEREQ5SY80 951 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 FAM180BQ6P0A1 224 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 MFSD6LQ8IWD5 586 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 TEX37Q96LM6 180 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 DPH1Q9BZG8 443 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 HRH4Q9H3N8 390 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 INSL6Q9Y581 213 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 CNMDO75829 334 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 WDPCPO95876 746 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 GDNFP39905 211 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 ALDH3B1P43353 468 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 BAK1Q16611 211 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 MEX3DQ86XN8 651 aaKnown RBP13.02□□□□□ -0.32
HCFC2-201ENST00000229330 LRRC56Q8IYG6 542 aaPredicted RBP13.02□□□□□ -0.32
HCFC2-201ENST00000229330 ZBTB44Q8NCP5 570 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 GLYATL1Q969I3 302 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 ZBTB8AQ96BR9 441 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 APMAPQ9HDC9 416 aa13.02□□□□□ -0.32
HCFC2-201ENST00000229330 PPP1R3DO95685 299 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 SPNP16150 400 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 NDUFS1P28331 727 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 ID2Q02363 134 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 BEX5Q5H9J7 111 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 TOR2AQ5JU69 321 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 UBE2NLQ5JXB2 153 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 TSSK4Q6SA08 328 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 STEAP2Q8NFT2 490 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 CYB5D2Q8WUJ1 264 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 SLC25A44Q96H78 314 aaPredicted RBP13.02□□□□□ -0.33
HCFC2-201ENST00000229330 C4orf36Q96KX1 117 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 URM1Q9BTM9 101 aaKnown RBP13.02□□□□□ -0.33
HCFC2-201ENST00000229330 INPP5EQ9NRR6 644 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 FBXL2Q9UKC9 423 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 V9GY05 133 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF736B4DX44 427 aaPredicted RBP13.02□□□□□ -0.33
HCFC2-201ENST00000229330 B4DXG7 233 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 FADS1O60427 444 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 IFNA1P01562 189 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 EDN1P05305 212 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF865P0CJ78 1059 aaPredicted RBP13.02□□□□□ -0.33
HCFC2-201ENST00000229330 DECR1Q16698 335 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 AMZ1Q400G9 498 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 SIAH3Q8IW03 269 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 CMTM8Q8IZV2 173 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 MDGA1Q8NFP4 955 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 WFIKKN2Q8TEU8 576 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 METTL2AQ96IZ6 378 aaKnown RBP13.02□□□□□ -0.33
HCFC2-201ENST00000229330 DCLRE1CQ96SD1 692 aaKnown RBP13.02□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF701Q9NV72 531 aaPredicted RBP13.02□□□□□ -0.33
HCFC2-201ENST00000229330 SNX11Q9Y5W9 270 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 IFNA5P01569 189 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 GABRA3P34903 492 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 SOWAHCQ53LP3 525 aaPredicted RBP13.02□□□□□ -0.33
HCFC2-201ENST00000229330 SLC51BQ86UW2 128 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 CYB561A3Q8NBI2 242 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 SLC25A46Q96AG3 418 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 MAFFQ9ULX9 164 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 CYP8B1Q9UNU6 501 aa13.02□□□□□ -0.33
HCFC2-201ENST00000229330 TRBV4-1A0A0J9YWV2 114 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 NPC1O15118 1278 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 CASC3O15234 703 aaKnown RBP13.01□□□□□ -0.33
HCFC2-201ENST00000229330 UBL3O95164 117 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 TAS2R31P59538 309 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 LNX2Q8N448 690 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 IL17CQ9P0M4 197 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 GFRA2O00451 464 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 IFNA10P01566 189 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 IFNA4P05014 189 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 RPS2P15880 293 aaKnown RBP13.01□□□□□ -0.33
HCFC2-201ENST00000229330 RAB6AP20340 208 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 GJA5P36382 358 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 MTNR1BP49286 362 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 FCRLBQ6BAA4 426 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 BTLAQ7Z6A9 289 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 OR13C3Q8NGS6 347 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF689Q96CS4 500 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms