RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TP63Q9H3D4 680 aaPredicted RBP11.52□□□□□ -0.57
LSM5-201ENST00000223084 SDHAF3Q9NRP4 125 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 UBQLN4Q9NRR5 601 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 PCDHGB3Q9Y5G1 929 aa11.52□□□□□ -0.57
LSM5-201ENST00000223084 UTP20O75691 2785 aaKnown RBP11.52□□□□□ -0.57
LSM5-201ENST00000223084 DUXAA6NLW8 204 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 KDM4EB2RXH2 506 aaPredicted RBP11.51□□□□□ -0.57
LSM5-201ENST00000223084 SCDO00767 359 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 DYNC1I1O14576 645 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 NDUFB5O43674 189 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 FCMRO60667 390 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 NGFRP08138 427 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 VIMP08670 466 aaKnown RBP11.51□□□□□ -0.57
LSM5-201ENST00000223084 HK1P19367 917 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 NCF2P19878 526 aaPredicted RBP11.51□□□□□ -0.57
LSM5-201ENST00000223084 ACVR2AP27037 513 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 LCN1P31025 176 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 DCTP40126 519 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 STARP49675 285 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 DSCR4P56555 118 aaPredicted RBP11.51□□□□□ -0.57
LSM5-201ENST00000223084 C17orf67Q0P5P2 114 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 PMPCAQ10713 525 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 FUT5Q11128 374 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 CDSNQ15517 529 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 FLYWCH1Q4VC44 716 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 AGKQ53H12 422 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 COX20Q5RI15 118 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.51□□□□□ -0.57
LSM5-201ENST00000223084 VASNQ6EMK4 673 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 CGB2Q6NT52 195 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 MTFR2Q6P444 385 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 SLC2A7Q6PXP3 512 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 C16orf62Q7Z3J2 963 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 TRIML2Q8N7C3 387 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 CHDHQ8NE62 594 aaPredicted RBP11.51□□□□□ -0.57
LSM5-201ENST00000223084 OR5M1Q8NGP8 315 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 SH3YL1Q96HL8 342 aaPredicted RBP11.51□□□□□ -0.57
LSM5-201ENST00000223084 ITCHQ96J02 903 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 TMEM120AQ9BXJ8 343 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 RMND5AQ9H871 391 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 CCDC167Q9P0B6 97 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 CAMK2AQ9UQM7 478 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 FAM215AQ9Y5M1 114 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 CACNA1CQ13936 2221 aa11.51□□□□□ -0.57
LSM5-201ENST00000223084 KIAA1549Q9HCM3 1950 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 HEATR5AQ86XA9 2040 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 CENPVL1A0A0U1RR11 272 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 PRAMEF27A3QJZ7 478 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 FIGNL2A6NMB9 653 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 SHISA8B8ZZ34 492 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 HMGN4O00479 90 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 OIP5O43482 229 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 SOX30O94993 753 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 ANP32DO95626 131 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 COL8A1P27658 744 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 KHKP50053 298 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 ATP4BP51164 291 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 ATP12AP54707 1039 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 NUP107P57740 925 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 LRRC74AQ0VAA2 488 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 SQLEQ14534 574 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 GPR68Q15743 365 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 NDUFAF6Q330K2 333 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 ARHGAP11BQ3KRB8 267 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 KLHL26Q53HC5 615 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 NHSL2Q5HYW2 709 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 C6orf10Q5SRN2 563 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 C1orf185Q5T7R7 199 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 HEPHL1Q6MZM0 1159 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 BLOC1S3Q6QNY0 202 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 ARSKQ6UWY0 536 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 MSANTD1Q6ZTZ1 278 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 HMGN2P46Q86SG4 172 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 IFNEQ86WN2 208 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 ULK2Q8IYT8 1036 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 EID3Q8N140 333 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 ZNF808Q8N4W9 903 aaPredicted RBP11.5□□□□□ -0.57
LSM5-201ENST00000223084 ZNF614Q8N883 585 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 ZFP90Q8TF47 636 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 PHF10Q8WUB8 498 aaKnown RBP11.5□□□□□ -0.57
LSM5-201ENST00000223084 GTF2H4Q92759 462 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 C1GALT1C1Q96EU7 318 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 AURKBQ96GD4 344 aaPredicted RBP11.5□□□□□ -0.57
LSM5-201ENST00000223084 WDYHV1Q96HA8 205 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 SFXN2Q96NB2 322 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 ZNF385DQ9H6B1 395 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 SLC52A3Q9NQ40 469 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 EXD2Q9NVH0 621 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 PLEKHB1Q9UF11 243 aaPredicted RBP11.5□□□□□ -0.57
LSM5-201ENST00000223084 KCNE5Q9UJ90 142 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 MKLN1Q9UL63 735 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 ARHGAP21Q5T5U3 1957 aa11.5□□□□□ -0.57
LSM5-201ENST00000223084 IGLV3-32A0A0A0MS00 114 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 A0A1W2PQD3 144 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 NPIPB9F8W1W9 429 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 WDR1O75083 606 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 TNFRSF21O75509 655 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 STX11O75558 287 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 AK1P00568 194 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 GLI4P10075 376 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms