RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 OR2M5A3KFT3 312 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 CASKO14936 926 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 GMFGO60234 142 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 SNNO75324 88 aaPredicted RBP13.52□□□□□ -0.25
UPK3A-201ENST00000216211 CRHP06850 196 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 UROSP10746 265 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 GABRA3P34903 492 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 CLK3P49761 638 aaKnown RBP13.52□□□□□ -0.25
UPK3A-201ENST00000216211 NAA20P61599 178 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 SIRPAP78324 504 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 BST1Q10588 318 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 STX3Q13277 289 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 KIAA0040Q15053 153 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 OR2A2Q6IF42 318 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 ANKRD26P1Q6NSI1 321 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 BTLAQ7Z6A9 289 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 YTHDF3Q7Z739 585 aaKnown RBP13.52□□□□□ -0.25
UPK3A-201ENST00000216211 WFDC11Q8NEX6 87 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 PIK3R3Q92569 461 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 C1GALT1C1Q96EU7 318 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 PINK1Q9BXM7 581 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 OPN3Q9H1Y3 402 aaPredicted RBP13.52□□□□□ -0.25
UPK3A-201ENST00000216211 PTGES2Q9H7Z7 377 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 EQTNQ9NQ60 294 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 DLL4Q9NR61 685 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 THAP1Q9NVV9 213 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 OXSMQ9NWU1 459 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 FAM120CQ9NX05 1096 aaKnown RBP13.52□□□□□ -0.25
UPK3A-201ENST00000216211 NDRG3Q9UGV2 375 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 MRTO4Q9UKD2 239 aaKnown RBP13.52□□□□□ -0.25
UPK3A-201ENST00000216211 EIF3LQ9Y262 564 aaKnown RBP13.52□□□□□ -0.25
UPK3A-201ENST00000216211 WBP11Q9Y2W2 641 aaKnown RBP13.52□□□□□ -0.25
UPK3A-201ENST00000216211 FIS1Q9Y3D6 152 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 TESMINQ9Y4I5 508 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 CCL27Q9Y4X3 112 aa13.52□□□□□ -0.25
UPK3A-201ENST00000216211 SHISA8B8ZZ34 492 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 PDPK1O15530 556 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 UTS2O95399 124 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 IGKV1D-16P01601 117 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 SERPINE1P05121 402 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 TROVE2P10155 538 aaKnown RBP eCLIP13.51□□□□□ -0.25
UPK3A-201ENST00000216211 CD53P19397 219 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 PRPH2P23942 346 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 GPC1P35052 558 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 KIR2DL2P43627 348 aaPredicted RBP13.51□□□□□ -0.25
UPK3A-201ENST00000216211 PSMD4P55036 377 aaKnown RBP13.51□□□□□ -0.25
UPK3A-201ENST00000216211 CLDN20P56880 219 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 EEFSECP57772 596 aaKnown RBP13.51□□□□□ -0.25
UPK3A-201ENST00000216211 OCRLQ01968 901 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 GRAMD1BQ3KR37 738 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 ZNF385BQ569K4 471 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 ZNF474Q6S9Z5 364 aaPredicted RBP13.51□□□□□ -0.25
UPK3A-201ENST00000216211 APOOLQ6UXV4 268 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 C10orf107Q8IVU9 208 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 SMPDL3BQ92485 455 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 CIDECQ96AQ7 238 aaPredicted RBP13.51□□□□□ -0.25
UPK3A-201ENST00000216211 ZNF845Q96IR2 970 aaPredicted RBP13.51□□□□□ -0.25
UPK3A-201ENST00000216211 PIGQQ9BRB3 760 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 TBL1XR1Q9BZK7 514 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 LRTM1Q9HBL6 345 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 C1orf109Q9NX04 203 aa13.51□□□□□ -0.25
UPK3A-201ENST00000216211 C6orf203Q9P0P8 240 aaPredicted RBP13.51□□□□□ -0.25
UPK3A-201ENST00000216211 CCT8L1PA6NM43 557 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 SLC28A1O00337 649 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 AKAP10O43572 662 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 TRIM13O60858 407 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 TNFRSF21O75509 655 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 KCNH1O95259 989 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 ANGPTL1O95841 491 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 PRPS2P11908 318 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 CD79BP40259 229 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 PRKAG1P54619 331 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 PON3Q15166 354 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 LIPMQ5VYY2 423 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 GALNT10Q86SR1 603 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 OR2T11Q8NH01 316 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 FNDC9Q8TBE3 224 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 GPR151Q8TDV0 419 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 WFIKKN1Q96NZ8 548 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 C3orf14Q9HBI5 128 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 KLHL28Q9NXS3 571 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 USH1CQ9Y6N9 552 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 NAV3Q8IVL0 2385 aa13.5□□□□□ -0.25
UPK3A-201ENST00000216211 RAI1Q7Z5J4 1906 aaPredicted RBP13.49□□□□□ -0.25
UPK3A-201ENST00000216211 TTC36A6NLP5 189 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 TMEM114B3SHH9 223 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 LINC01387J3KSC0 135 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 AZIN1O14977 448 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 SIAH2O43255 324 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 RGS14O43566 566 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 CGAP01215 116 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 IFI6P09912 130 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 POU2F1P14859 743 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 FOSL1P15407 271 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 HOXB4P17483 251 aaPredicted RBP13.49□□□□□ -0.25
UPK3A-201ENST00000216211 SDC1P18827 310 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 HOXC12P31275 282 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 PRR5P85299 388 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 C17orf67Q0P5P2 114 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 KRTAP21-3Q3LHN1 58 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms