RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 HIF3AQ9Y2N7 669 aa21.79■■□□□ 1.08
TARBP1-201ENST00000040877 C12orf71A8MTZ7 269 aa21.79■■□□□ 1.08
TARBP1-201ENST00000040877 EIF2DP41214 584 aaKnown RBP21.79■■□□□ 1.08
TARBP1-201ENST00000040877 MFSD8Q8NHS3 518 aa21.79■■□□□ 1.08
TARBP1-201ENST00000040877 ZNF350Q9GZX5 532 aa21.79■■□□□ 1.08
TARBP1-201ENST00000040877 GPN2Q9H9Y4 310 aaPredicted RBP21.79■■□□□ 1.08
TARBP1-201ENST00000040877 CNIH4Q9P003 139 aa21.79■■□□□ 1.08
TARBP1-201ENST00000040877 A6NHS1 94 aa21.79■■□□□ 1.08
TARBP1-201ENST00000040877 EFCAB7A8K855 629 aa21.79■■□□□ 1.08
TARBP1-201ENST00000040877 H3BNC9 293 aa21.79■■□□□ 1.08
TARBP1-201ENST00000040877 SLC33A1O00400 549 aaPredicted RBP21.79■■□□□ 1.08
TARBP1-201ENST00000040877 MAGEA3P43357 314 aa21.79■■□□□ 1.08
TARBP1-201ENST00000040877 CDK5R2Q13319 367 aa21.79■■□□□ 1.08
TARBP1-201ENST00000040877 RNASE10Q5GAN6 216 aaKnown RBP21.79■■□□□ 1.08
TARBP1-201ENST00000040877 FAM86C1Q9NVL1 165 aa21.79■■□□□ 1.08
TARBP1-201ENST00000040877 SYT7O43581 403 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 LDB3O75112 727 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 PITPNBP48739 271 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 TMEM52BQ4KMG9 183 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 CLEC14AQ86T13 490 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 OR5D16Q8NGK9 328 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 C3orf30Q96M34 536 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 C1QTNF2Q9BXJ5 285 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 RDH8Q9NYR8 311 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 FCER2P06734 321 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 T-ENOLP0DO92 83 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 GCAP28676 217 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 CD97P48960 835 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 RAB38P57729 211 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 RSU1Q15404 277 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 IQCF1Q8N6M8 205 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 GTF2H4Q92759 462 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 OR5B2Q96R09 309 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 ALG8Q9BVK2 526 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 CUTCQ9NTM9 273 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 KCNIP1Q9NZI2 227 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 ICKQ9UPZ9 632 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 KLKB1P03952 638 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 RAB40BQ12829 278 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 PIAS4Q8N2W9 510 aaPredicted RBP21.78■■□□□ 1.08
TARBP1-201ENST00000040877 LSM14AQ8ND56 463 aaKnown RBP21.78■■□□□ 1.08
TARBP1-201ENST00000040877 RLN3Q8WXF3 142 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 COL16A1Q07092 1604 aaPredicted RBP21.78■■□□□ 1.08
TARBP1-201ENST00000040877 SULT2B1O00204 365 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 OR7A10O76100 309 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 ECH1Q13011 328 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 FAM76BQ5HYJ3 339 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 WBP2NLQ6ICG8 309 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 GALNT6Q8NCL4 622 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 ZC3H10Q96K80 434 aaKnown RBP21.78■■□□□ 1.08
TARBP1-201ENST00000040877 OR7D2Q96RA2 312 aa21.78■■□□□ 1.08
TARBP1-201ENST00000040877 RBM24Q9BX46 236 aaKnown RBP21.78■■□□□ 1.08
TARBP1-201ENST00000040877 TCRBV3S1A0A5B6 114 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 ATG12O94817 140 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 MAS1P04201 325 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 FAM205BPQ63HN1 556 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 ZNF611Q8N823 705 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 OR14A16Q8NHC5 309 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 BPIFA2Q96DR5 249 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 SYT4Q9H2B2 425 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 CUEDC1Q9NWM3 386 aaPredicted RBP21.77■■□□□ 1.08
TARBP1-201ENST00000040877 KCNS2Q9ULS6 477 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 H2AFB2P0C5Z0 115 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 PLAG1Q6DJT9 500 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 AGBL5Q8NDL9 886 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 ZNF417Q8TAU3 575 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 RANBP3Q9H6Z4 567 aaPredicted RBP21.77■■□□□ 1.08
TARBP1-201ENST00000040877 TESQ9UGI8 421 aaKnown RBP21.77■■□□□ 1.08
TARBP1-201ENST00000040877 GPR39O43194 453 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 KCNK5O95279 499 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 GPR139Q6DWJ6 353 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 L3MBTL4Q8NA19 623 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 POGLUT1Q8NBL1 392 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 INIPQ9NRY2 104 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 IER3IP1Q9Y5U9 82 aa21.77■■□□□ 1.08
TARBP1-201ENST00000040877 ZNF850A8MQ14 1090 aa21.77■■□□□ 1.07
TARBP1-201ENST00000040877 GALR3O60755 368 aaPredicted RBP21.77■■□□□ 1.07
TARBP1-201ENST00000040877 ICAM2P13598 275 aa21.77■■□□□ 1.07
TARBP1-201ENST00000040877 LPAL2Q16609 132 aa21.77■■□□□ 1.07
TARBP1-201ENST00000040877 ATAD3CQ5T2N8 411 aa21.77■■□□□ 1.07
TARBP1-201ENST00000040877 GPR148Q8TDV2 347 aa21.77■■□□□ 1.07
TARBP1-201ENST00000040877 SLC6A7Q99884 636 aa21.77■■□□□ 1.07
TARBP1-201ENST00000040877 POLE4Q9NR33 117 aa21.77■■□□□ 1.07
TARBP1-201ENST00000040877 MYH4Q9Y623 1939 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 H0YGG7 62 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 ARF3P61204 181 aaPredicted RBP21.76■■□□□ 1.07
TARBP1-201ENST00000040877 UGT8Q16880 541 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 SLC22A10Q63ZE4 541 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 BEND4Q6ZU67 534 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 OR8J2Q8NGG1 315 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 SMIM14Q96QK8 99 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 INPP5EQ9NRR6 644 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 STARD5Q9NSY2 213 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 A8MV72 311 aaPredicted RBP21.76■■□□□ 1.07
TARBP1-201ENST00000040877 FOXD2O60548 495 aaPredicted RBP21.76■■□□□ 1.07
TARBP1-201ENST00000040877 SFTPDP35247 375 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 SPRED3Q2MJR0 410 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 ZFP41Q8N8Y5 198 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 SYT14Q8NB59 555 aa21.76■■□□□ 1.07
TARBP1-201ENST00000040877 ZNF576Q9H609 170 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms