RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CLDN22Q8N7P3 220 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 RCBTB1Q8NDN9 531 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 PTPMT1Q8WUK0 201 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 PTCHD1Q96NR3 888 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 DPYSL5Q9BPU6 564 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 PRSS27Q9BQR3 290 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 ZNF559Q9BR84 538 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 CNPPD1Q9BV87 410 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 NAA50Q9GZZ1 169 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 ZNF304Q9HCX3 659 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 KRCC1Q9NPI7 259 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 C11orf16Q9NQ32 467 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 FGF21Q9NSA1 209 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 DTX4Q9Y2E6 619 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 NTNG1Q9Y2I2 539 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 OR2W5A6NFC9 320 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 ATE1O95260 518 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 PRG2P13727 222 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 TNNI3P19429 210 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 FBLP22087 321 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 ALAS2P22557 587 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 OR1D4P47884 311 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 ST13P50502 369 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 SMSP52788 366 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 GINS1Q14691 196 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 OR1Q1Q15612 314 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 ARHGAP22Q7Z5H3 698 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 RABEPKQ7Z6M1 372 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 KIF18BQ86Y91 864 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 POGLUT1Q8NBL1 392 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 C9orf43Q8TAL5 461 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 PIGKQ92643 395 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 FGF11Q92914 225 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 NAT6Q93015 286 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 YIPF6Q96EC8 236 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 FUNDC2Q9BWH2 189 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 CDCA4Q9BXL8 241 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 LIN28AQ9H9Z2 209 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 DHCR7Q9UBM7 475 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 ENPP5Q9UJA9 477 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 SLC7A7Q9UM01 511 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 SRPK3Q9UPE1 567 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 CFL2Q9Y281 166 aa13.25□□□□□ -0.29
RTFDC1-201ENST00000023939 ARID1BQ8NFD5 2236 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 NPIPA5A0A0B4J1W7 369 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 TCRBV16S1A1N1A0A5B0 115 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 C17orf105B2RV13 164 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 NPIPA7E9PJI5 369 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 M0R129 80 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 SIGLEC6O43699 453 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 FADS2O95864 444 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 NPIPA8P0DM63 369 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 CCNA2P20248 432 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 PCYT1AP49585 367 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 ATP12AP54707 1039 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 RHAGQ02094 409 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 ACY1Q03154 408 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 FGFBP1Q14512 234 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 CLPPQ16740 277 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 PDZK1Q5T2W1 519 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 MEDAGQ5VYS4 303 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 GUSBP11Q6P575 273 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 ZNF574Q6ZN55 896 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 SLC16A12Q6ZSM3 486 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 ZSCAN1Q8NBB4 408 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 B3GNT7Q8NFL0 401 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 OR4N2Q8NGD1 307 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 OR4D9Q8NGE8 314 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 CEP76Q8TAP6 659 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 TEX47Q8TBZ9 253 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 SENP5Q96HI0 755 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 SLC46A1Q96NT5 459 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 ITPAQ9BY32 194 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 CAPN10Q9HC96 672 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 MKKSQ9NPJ1 570 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 GPR83Q9NYM4 423 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 IL20Q9NYY1 176 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 WARS2Q9UGM6 360 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 ZNF223Q9UK11 482 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 CBLCQ9ULV8 474 aa13.24□□□□□ -0.29
RTFDC1-201ENST00000023939 A8MU76 341 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 DYRK3O43781 588 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 GABARAPO95166 117 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 IGKV3-11P04433 115 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 C21orf33P30042 268 aaPredicted RBP13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 RORAP35398 523 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 PPICP45877 212 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 PGDP52209 483 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 NUDT6P53370 316 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 SLC37A1P57057 533 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 ST3GAL4Q11206 333 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 ELAVL1Q15717 326 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 PERM1Q5SV97 790 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 MFSD4BQ5TF39 518 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 RNLSQ5VYX0 342 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 SLC27A4Q6P1M0 643 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 TMEM151BQ8IW70 566 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 NRMQ8IXM6 262 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms