RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm28048F7BCN0 99 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Olfr631F8VPJ9 319 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Cldn34aG3UW52 211 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Scarb2O35114 478 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Vti1bO88384 232 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Csnk2bP67871 215 aaKnown RBP21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Cobll1Q3UMF0 1273 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Tspan7Q62283 249 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Hist1h2aaQ8CGP4 129 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Blzf1Q8R2X8 403 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Olfr729Q8VET4 323 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Mgat2Q921V5 442 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Cby3Q9CVN6 235 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 NplQ9DCJ9 320 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Clec3aQ9EPW4 196 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Kcnd3Q9Z0V1 655 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Lrrk1Q3UHC2 2014 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Igkv9-123A0A140T8N8 117 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Zfp937A2ANU7 503 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Olfr1303A2AVW1 312 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Gm6569D3YTM9 175 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Zfp275G3X904 499 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Slc22a8O88909 537 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 CgaP01216 120 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 P01635 115 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Hsd3b1P24815 373 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Htr1bP28334 386 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 SctrQ5FWI2 447 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Fads6Q80UG1 342 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Cpt1cQ8BGD5 798 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Mrps35Q8BJZ4 320 aaKnown RBP21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Arhgap28Q8BN58 729 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 LdahQ8BVA5 326 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Ugt2a3Q8BWQ1 534 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Unc5dQ8K1S2 956 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 CcsapQ8QZT2 252 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Vmn1r75Q8R289 305 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Rbms2Q8VC70 383 aaKnown RBP21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 2200002D01RikQ9D809 114 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 HgfacQ9R098 653 aa21.1■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Gm8251F6VUT6 1994 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 IsxA1A546 240 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Olfr1032A2ATE5 310 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 A430033K04RikE9Q8G5 680 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 NsmafO35242 920 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Gstm2P15626 218 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 VipP32648 170 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Tmem64Q3U145 381 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 1700012B07RikQ3V0S8 276 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Gm14851Q5ERJ0 116 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Tusc1Q673H1 205 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Mettl7a1Q8C6B0 244 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Lurap1lQ8K2P1 221 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Pex12Q8VC48 359 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Olfr849Q8VFF6 312 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Sh3bp4Q921I6 962 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Abcb9Q9JJ59 762 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Slc6a14Q9JMA9 638 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Cyp11a1Q9QZ82 526 aa21.09■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Tns1E9Q0S6 1888 aaKnown RBP21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 AgmatA2AS89 358 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Klhl4B1AZR0 717 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Gm19965J3QNY8 723 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Vmn2r92L7N2A4 860 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Apoa2P09813 102 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Hmgn1P18608 96 aaKnown RBP21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Klri2Q5DT36 248 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Olfr774Q7TRI5 312 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Amigo2Q80ZD9 519 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Rcn3Q8BH97 328 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Lcmt2Q8BYR1 686 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Tm6sf2Q8R1J1 378 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Tubg2Q8VCK3 451 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Olfr514Q8VFZ6 310 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Olfr781Q8VFZ8 311 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Olfr812Q8VG64 310 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Rnf144aQ925F3 292 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Timm22Q9CQ85 194 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Mfsd1Q9DC37 464 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Tnfrsf22Q9ER62 198 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 March7Q9WV66 693 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 PtgfrnQ9WV91 879 aa21.08■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Spg11Q3UHA3 2430 aa21.08■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Mpeg1A1L314 713 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Gm6592A2AHC7 168 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Rex2A2AWF2 685 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Kcnmb3E9Q7U0 239 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Psmd4O35226 376 aaKnown RBP21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Klrb1aP27811 227 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Gadd45aP48316 165 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 LumP51885 338 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Isl1P61372 349 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Agbl4Q09LZ8 540 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Gm10644Q3TZG3 87 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Galk2Q68FH4 458 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Frg2f1Q6P3A2 227 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Galnt2Q6PB93 570 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Cldn34b3Q80ZS5 209 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Slc25a24Q8BMD8 475 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Ndrg4Q8BTG7 352 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms