RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 PigmQ8C2R7 423 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Nrip1Q8CBD1 1161 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zbtb9Q8CDC7 459 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tgm1Q9JLF6 815 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Elf4Q9Z2U4 655 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Bcl9lQ67FY2 1494 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cd300ld4A2A7W1 245 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Trgv2A2J008 116 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tcte1A6H639 498 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Srp54bE9PXC0 504 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn2r69G3XA45 850 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn1r25H3BLP0 302 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Kcnc1P15388 511 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Npbwr1P49681 329 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 PrkcgP63318 697 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ikzf1Q03267 517 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Mat2aQ3THS6 395 aaKnown RBP9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 MuskQ61006 868 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Usp17laQ61068 526 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cntn2Q61330 1040 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cd300ld3Q6SJQ5 245 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1061Q7TR72 313 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Esco2Q8CIB9 592 aaKnown RBP9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1043Q8VFK4 314 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Col1a1P11087 1453 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm7697A0A0J9YUH2 350 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm9495A0A0J9YUZ3 350 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr396-ps1A0A0U1RNF5 211 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fam136b-psA0A140T8T1 138 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fam124aD3Z5V4 536 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Maml2F6U238 1170 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ctu2Q3U308 514 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm11487Q5RIS0 354 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Pabpc2Q62029 628 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 MffQ6PCP5 291 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Stoml3Q6PE84 287 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Slc35f2Q7TML3 375 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1219Q7TR04 311 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Prss34Q80UR4 318 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Derl2Q8BNI4 239 aaKnown RBP9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Eml3Q8VC03 897 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Mtif3Q9CZD5 276 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 S100a16Q9D708 124 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm5538W4VSP6 401 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 1810010D01RikA0A1L1SR87 51 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tmem200cJ3QK46 637 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 MgllO35678 303 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Sstr2P30875 369 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cln6Q3U466 308 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Bhlha9Q5RJB0 231 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Epha6Q62413 1035 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Lcn4Q62472 185 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1106Q7TR57 312 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fbxo5Q7TSG3 421 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Clec9aQ8BRU4 238 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Nudt6Q8CH40 313 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gramd1cQ8CI52 457 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Mrpl58Q8R035 206 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vmn1r22Q8R2D1 302 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Oosp1Q925U0 202 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Entpd4Q9DBT4 613 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ptf1aQ9QX98 324 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm5938A2AEN9 163 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 S1pr1O08530 382 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Hsd3b6O35469 373 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Hbb-bh0P04443 147 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Nat2P50295 290 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ccr3P51678 359 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tie1Q06806 1134 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ranbp3lQ6PDH4 491 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1322Q7TQW3 310 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr298Q7TS06 332 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Rnf26Q8BUH7 424 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Cavin3Q91VJ2 260 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Aldh7a1Q9DBF1 539 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ate1Q9Z2A5 516 aa9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Myo18aQ9JMH9 2050 aaKnown RBP9.63□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Gm20828J3KMI7 228 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 P01652 108 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Hnf1bP27889 558 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 ptchd1Q14B62 888 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Dmrtc1bQ2PMX6 267 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Mtmr11Q3V1L6 700 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fam109aQ8BH49 266 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ebf4Q8K4J2 599 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 NagsQ8R4H7 527 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr535Q8VGL3 312 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ier5lQ99J55 406 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Raet1eQ9CZQ6 251 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Tmem269Q9D4Y8 254 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 ChrdQ9Z0E2 948 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Fcn1O70165 334 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Efna1P52793 205 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Zfp39Q02525 718 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ffar3Q3UFD7 319 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Nt5c3bQ3UFY7 300 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Olfr1080Q7TR67 313 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Vrk1Q80X41 440 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Sult2a8Q8BGL3 282 aa9.62□□□□□ -0.87
Ubr1-201ENSMUST00000028728 Ankrd46Q8BTZ5 228 aa9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms