RNA–Protein interactions for RNA: ENST00000640939.1

GRAMD1B-217, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-217ENST00000640939 ZNF526Q8TF50 670 aaPredicted RBP29.02■■■□□ 2.24
GRAMD1B-217ENST00000640939 SPINK5Q9NQ38 1064 aaPredicted RBP29.02■■■□□ 2.24
GRAMD1B-217ENST00000640939 ARFGEF2Q9Y6D5 1785 aa29.02■■■□□ 2.24
GRAMD1B-217ENST00000640939 SBF1O95248 1867 aa29.01■■■□□ 2.23
GRAMD1B-217ENST00000640939 RNF181Q9P0P0 153 aa29■■■□□ 2.23
GRAMD1B-217ENST00000640939 CHMP4AQ9BY43 222 aa28.99■■■□□ 2.23
GRAMD1B-217ENST00000640939 RIC1Q4ADV7 1423 aa28.99■■■□□ 2.23
GRAMD1B-217ENST00000640939 ATP5J2-PTCD1G3V325 749 aa28.98■■■□□ 2.23
GRAMD1B-217ENST00000640939 CCER2I3L3R5 266 aa28.98■■■□□ 2.23
GRAMD1B-217ENST00000640939 NFKBIEO00221 500 aa28.98■■■□□ 2.23
GRAMD1B-217ENST00000640939 GOLGA2Q08379 1002 aa28.98■■■□□ 2.23
GRAMD1B-217ENST00000640939 CRY2Q49AN0 593 aa28.98■■■□□ 2.23
GRAMD1B-217ENST00000640939 C3orf67Q6ZVT6 689 aa28.98■■■□□ 2.23
GRAMD1B-217ENST00000640939 RIC3Q7Z5B4 369 aa28.98■■■□□ 2.23
GRAMD1B-217ENST00000640939 PRELPP51888 382 aa28.97■■■□□ 2.23
GRAMD1B-217ENST00000640939 EXOSC9Q06265 439 aaKnown RBP28.97■■■□□ 2.23
GRAMD1B-217ENST00000640939 SYNE4Q8N205 404 aa28.97■■■□□ 2.23
GRAMD1B-217ENST00000640939 ISCA1Q9BUE6 129 aa28.97■■■□□ 2.23
GRAMD1B-217ENST00000640939 TRMT112Q9UI30 125 aaKnown RBP28.97■■■□□ 2.23
GRAMD1B-217ENST00000640939 STK31Q9BXU1 1019 aa28.96■■■□□ 2.23
GRAMD1B-217ENST00000640939 RPGRQ92834 1020 aaKnown RBP28.95■■■□□ 2.22
GRAMD1B-217ENST00000640939 GPBP1L1Q9HC44 474 aaPredicted RBP28.95■■■□□ 2.22
GRAMD1B-217ENST00000640939 FER1L6Q2WGJ9 1857 aa28.95■■■□□ 2.22
GRAMD1B-217ENST00000640939 ALDH1B1P30837 517 aa28.94■■■□□ 2.22
GRAMD1B-217ENST00000640939 SLC10A5Q5PT55 438 aa28.94■■■□□ 2.22
GRAMD1B-217ENST00000640939 C7orf43Q8WVR3 580 aa28.94■■■□□ 2.22
GRAMD1B-217ENST00000640939 RNF123Q5XPI4 1314 aa28.94■■■□□ 2.22
GRAMD1B-217ENST00000640939 CCDC88AQ3V6T2 1871 aa28.93■■■□□ 2.22
GRAMD1B-217ENST00000640939 HCLS1P14317 486 aaPredicted RBP28.93■■■□□ 2.22
GRAMD1B-217ENST00000640939 LMNB1P20700 586 aa28.93■■■□□ 2.22
GRAMD1B-217ENST00000640939 OLFM4Q6UX06 510 aa28.93■■■□□ 2.22
GRAMD1B-217ENST00000640939 NLRP3Q96P20 1036 aa28.93■■■□□ 2.22
GRAMD1B-217ENST00000640939 MYH16Q9H6N6 1097 aa28.93■■■□□ 2.22
GRAMD1B-217ENST00000640939 SH3TC1Q8TE82 1336 aa28.93■■■□□ 2.22
GRAMD1B-217ENST00000640939 ZNF521Q96K83 1311 aa28.93■■■□□ 2.22
GRAMD1B-217ENST00000640939 MYD88Q99836 296 aa28.92■■■□□ 2.22
GRAMD1B-217ENST00000640939 VAMP4O75379 141 aa28.91■■■□□ 2.22
GRAMD1B-217ENST00000640939 DDX58O95786 925 aaKnown RBP28.91■■■□□ 2.22
GRAMD1B-217ENST00000640939 SLC4A2P04920 1241 aa28.91■■■□□ 2.22
GRAMD1B-217ENST00000640939 HOXA10P31260 410 aaPredicted RBP28.91■■■□□ 2.22
GRAMD1B-217ENST00000640939 SOGA3Q5TF21 947 aa28.91■■■□□ 2.22
GRAMD1B-217ENST00000640939 DIEXFQ68CQ4 756 aaKnown RBP28.91■■■□□ 2.22
GRAMD1B-217ENST00000640939 G2E3Q7L622 706 aa28.91■■■□□ 2.22
GRAMD1B-217ENST00000640939 LAMB2P55268 1798 aa28.9■■■□□ 2.22
GRAMD1B-217ENST00000640939 RBM17Q96I25 401 aaKnown RBP28.9■■■□□ 2.22
GRAMD1B-217ENST00000640939 CCDC93Q567U6 631 aa28.89■■■□□ 2.22
GRAMD1B-217ENST00000640939 RTL5Q5HYW3 569 aaPredicted RBP28.89■■■□□ 2.22
GRAMD1B-217ENST00000640939 FAM89AQ96GI7 184 aa28.89■■■□□ 2.22
GRAMD1B-217ENST00000640939 TAOK3Q9H2K8 898 aa28.89■■■□□ 2.22
GRAMD1B-217ENST00000640939 TRIM28Q13263 835 aaKnown RBP28.88■■■□□ 2.21
GRAMD1B-217ENST00000640939 MAP3K2Q9Y2U5 619 aa28.88■■■□□ 2.21
GRAMD1B-217ENST00000640939 CRAMP1Q96RY5 1269 aa28.87■■■□□ 2.21
GRAMD1B-217ENST00000640939 METTL22Q9BUU2 404 aaPredicted RBP28.87■■■□□ 2.21
GRAMD1B-217ENST00000640939 DDX60Q8IY21 1712 aaKnown RBP28.86■■■□□ 2.21
GRAMD1B-217ENST00000640939 PI4KAP2A4QPH2 592 aa28.86■■■□□ 2.21
GRAMD1B-217ENST00000640939 KSR2Q6VAB6 950 aa28.86■■■□□ 2.21
GRAMD1B-217ENST00000640939 PI4KAP1Q8N8J0 262 aa28.86■■■□□ 2.21
GRAMD1B-217ENST00000640939 LTBP3Q9NS15 1303 aa28.86■■■□□ 2.21
GRAMD1B-217ENST00000640939 TIAM2Q8IVF5 1701 aa28.86■■■□□ 2.21
GRAMD1B-217ENST00000640939 SLC51AQ86UW1 340 aa28.85■■■□□ 2.21
GRAMD1B-217ENST00000640939 MIER1Q8N108 512 aa28.85■■■□□ 2.21
GRAMD1B-217ENST00000640939 ABCC4O15439 1325 aa28.83■■■□□ 2.21
GRAMD1B-217ENST00000640939 PPEF1O14829 653 aaPredicted RBP28.82■■■□□ 2.2
GRAMD1B-217ENST00000640939 FLIIQ13045 1269 aa28.82■■■□□ 2.2
GRAMD1B-217ENST00000640939 RTKN2Q8IZC4 609 aa28.82■■■□□ 2.2
GRAMD1B-217ENST00000640939 CCDC191Q8NCU4 936 aa28.82■■■□□ 2.2
GRAMD1B-217ENST00000640939 DICER1Q9UPY3 1922 aaKnown RBP28.82■■■□□ 2.2
GRAMD1B-217ENST00000640939 CACNA1FO60840 1977 aa28.81■■■□□ 2.2
GRAMD1B-217ENST00000640939 IRS4O14654 1257 aaPredicted RBP28.81■■■□□ 2.2
GRAMD1B-217ENST00000640939 FKBP4Q02790 459 aaKnown RBP eCLIP28.81■■■□□ 2.2
GRAMD1B-217ENST00000640939 JARID2Q92833 1246 aaPredicted RBP28.81■■■□□ 2.2
GRAMD1B-217ENST00000640939 NMRK2Q9NPI5 230 aa28.81■■■□□ 2.2
GRAMD1B-217ENST00000640939 CWC25Q9NXE8 425 aaPredicted RBP28.81■■■□□ 2.2
GRAMD1B-217ENST00000640939 ZC3H4Q9UPT8 1303 aaKnown RBP28.8■■■□□ 2.2
GRAMD1B-217ENST00000640939 ZBTB38Q8NAP3 1195 aaPredicted RBP28.8■■■□□ 2.2
GRAMD1B-217ENST00000640939 ZNF277Q9NRM2 450 aaPredicted RBP28.8■■■□□ 2.2
GRAMD1B-217ENST00000640939 TAF1P21675 1872 aa28.79■■■□□ 2.2
GRAMD1B-217ENST00000640939 KIF3CO14782 793 aa28.79■■■□□ 2.2
GRAMD1B-217ENST00000640939 IGKV5-2P06315 115 aa28.79■■■□□ 2.2
GRAMD1B-217ENST00000640939 C1QTNF8P60827 252 aa28.79■■■□□ 2.2
GRAMD1B-217ENST00000640939 FKBP5Q13451 457 aaPredicted RBP28.79■■■□□ 2.2
GRAMD1B-217ENST00000640939 DDX46Q7L014 1031 aaKnown RBP28.79■■■□□ 2.2
GRAMD1B-217ENST00000640939 SNED1Q8TER0 1413 aa28.78■■■□□ 2.2
GRAMD1B-217ENST00000640939 KDM2BQ8NHM5 1336 aa28.78■■■□□ 2.2
GRAMD1B-217ENST00000640939 E9PSI1 815 aa28.78■■■□□ 2.2
GRAMD1B-217ENST00000640939 NEXNQ0ZGT2 675 aa28.77■■■□□ 2.2
GRAMD1B-217ENST00000640939 CWF19L2Q2TBE0 894 aaKnown RBP28.77■■■□□ 2.2
GRAMD1B-217ENST00000640939 CC2D2BQ6DHV5 1058 aa28.77■■■□□ 2.2
GRAMD1B-217ENST00000640939 CDCA7LQ96GN5 454 aa28.77■■■□□ 2.2
GRAMD1B-217ENST00000640939 PCCAP05165 728 aaPredicted RBP28.76■■■□□ 2.19
GRAMD1B-217ENST00000640939 SLFN5Q08AF3 891 aa28.76■■■□□ 2.19
GRAMD1B-217ENST00000640939 GRAPQ13588 217 aa28.75■■■□□ 2.19
GRAMD1B-217ENST00000640939 SF3B3Q15393 1217 aaKnown RBP28.75■■■□□ 2.19
GRAMD1B-217ENST00000640939 GRAPLQ8TC17 118 aaPredicted RBP28.75■■■□□ 2.19
GRAMD1B-217ENST00000640939 ATP6V0A2Q9Y487 856 aa28.75■■■□□ 2.19
GRAMD1B-217ENST00000640939 GLTPD2A6NH11 291 aa28.74■■■□□ 2.19
GRAMD1B-217ENST00000640939 BBOX1O75936 387 aa28.74■■■□□ 2.19
GRAMD1B-217ENST00000640939 PSMD1Q99460 953 aa28.74■■■□□ 2.19
GRAMD1B-217ENST00000640939 RRAGCQ9HB90 399 aa28.74■■■□□ 2.19
GRAMD1B-217ENST00000640939 NEURL1BA8MQ27 555 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms