RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 HIF1AQ16665 826 aa7.57□□□□□ -1.2
RTTN-220ENST00000640654 SH3PXD2AQ5TCZ1 1133 aa7.57□□□□□ -1.2
RTTN-220ENST00000640654 FMR1NBQ8N0W7 255 aaPredicted RBP7.57□□□□□ -1.2
RTTN-220ENST00000640654 C7orf43Q8WVR3 580 aa7.57□□□□□ -1.2
RTTN-220ENST00000640654 PNMA5Q96PV4 448 aa7.57□□□□□ -1.2
RTTN-220ENST00000640654 PHACTR1Q9C0D0 580 aa7.57□□□□□ -1.2
RTTN-220ENST00000640654 GOLGA2P5Q9HBQ8 144 aa7.57□□□□□ -1.2
RTTN-220ENST00000640654 WWC1Q8IX03 1113 aa7.56□□□□□ -1.2
RTTN-220ENST00000640654 PCGF6Q9BYE7 350 aa7.56□□□□□ -1.2
RTTN-220ENST00000640654 RGS9O75916 674 aaPredicted RBP7.55□□□□□ -1.2
RTTN-220ENST00000640654 ATP1A2P50993 1020 aa7.55□□□□□ -1.2
RTTN-220ENST00000640654 PSAPL1Q6NUJ1 521 aa7.55□□□□□ -1.2
RTTN-220ENST00000640654 DMRTC2Q8IXT2 367 aaPredicted RBP7.55□□□□□ -1.2
RTTN-220ENST00000640654 SUSD3Q96L08 255 aa7.55□□□□□ -1.2
RTTN-220ENST00000640654 RNF112Q9ULX5 631 aa7.55□□□□□ -1.2
RTTN-220ENST00000640654 HCN4Q9Y3Q4 1203 aa7.55□□□□□ -1.2
RTTN-220ENST00000640654 USP17L5A8MUK1 530 aa7.54□□□□□ -1.2
RTTN-220ENST00000640654 AFF1P51825 1210 aaKnown RBP7.54□□□□□ -1.2
RTTN-220ENST00000640654 PCSK7Q16549 785 aa7.54□□□□□ -1.2
RTTN-220ENST00000640654 TPCN2Q8NHX9 752 aa7.54□□□□□ -1.2
RTTN-220ENST00000640654 MCTP1Q6DN14 999 aa7.53□□□□□ -1.2
RTTN-220ENST00000640654 DTWD1Q8N5C7 304 aa7.53□□□□□ -1.2
RTTN-220ENST00000640654 ZNF280CQ8ND82 737 aa7.53□□□□□ -1.2
RTTN-220ENST00000640654 SSBP4Q9BWG4 385 aaPredicted RBP7.53□□□□□ -1.2
RTTN-220ENST00000640654 TSPAN10Q9H1Z9 355 aaPredicted RBP7.53□□□□□ -1.2
RTTN-220ENST00000640654 DNAJB12Q9NXW2 375 aaKnown RBP7.53□□□□□ -1.2
RTTN-220ENST00000640654 RBM19Q9Y4C8 960 aaKnown RBP7.53□□□□□ -1.2
RTTN-220ENST00000640654 NACADO15069 1562 aa7.52□□□□□ -1.21
RTTN-220ENST00000640654 CCDC102BQ68D86 513 aa7.52□□□□□ -1.21
RTTN-220ENST00000640654 BTLAQ7Z6A9 289 aa7.52□□□□□ -1.21
RTTN-220ENST00000640654 DEPDC4Q8N2C3 294 aa7.52□□□□□ -1.21
RTTN-220ENST00000640654 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.52□□□□□ -1.21
RTTN-220ENST00000640654 PAX4O43316 350 aa7.51□□□□□ -1.21
RTTN-220ENST00000640654 PPP1R12BO60237 982 aaPredicted RBP7.51□□□□□ -1.21
RTTN-220ENST00000640654 WFDC12Q8WWY7 111 aa7.51□□□□□ -1.21
RTTN-220ENST00000640654 PCMTD2Q9NV79 361 aa7.51□□□□□ -1.21
RTTN-220ENST00000640654 RB1CC1Q8TDY2 1594 aa7.5□□□□□ -1.21
RTTN-220ENST00000640654 M0R2N6 131 aa7.5□□□□□ -1.21
RTTN-220ENST00000640654 IREB2P48200 963 aaKnown RBP7.5□□□□□ -1.21
RTTN-220ENST00000640654 MSL1Q68DK7 614 aa7.5□□□□□ -1.21
RTTN-220ENST00000640654 POTEAQ6S8J7 498 aa7.5□□□□□ -1.21
RTTN-220ENST00000640654 EPB42P16452 691 aa7.49□□□□□ -1.21
RTTN-220ENST00000640654 NFKB1P19838 968 aa7.49□□□□□ -1.21
RTTN-220ENST00000640654 CCINQ13939 588 aa7.49□□□□□ -1.21
RTTN-220ENST00000640654 FAM35AQ86V20 835 aa7.49□□□□□ -1.21
RTTN-220ENST00000640654 FBXO11Q86XK2 927 aa7.49□□□□□ -1.21
RTTN-220ENST00000640654 KRTAP19-1Q8IUB9 90 aa7.49□□□□□ -1.21
RTTN-220ENST00000640654 ALDH16A1Q8IZ83 802 aa7.49□□□□□ -1.21
RTTN-220ENST00000640654 ALG2Q9H553 416 aa7.49□□□□□ -1.21
RTTN-220ENST00000640654 NAGPAQ9UK23 515 aa7.49□□□□□ -1.21
RTTN-220ENST00000640654 WFDC8Q8IUA0 241 aa7.48□□□□□ -1.21
RTTN-220ENST00000640654 GSX2Q9BZM3 304 aa7.48□□□□□ -1.21
RTTN-220ENST00000640654 CPB1P15086 417 aa7.47□□□□□ -1.21
RTTN-220ENST00000640654 NOS3P29474 1203 aa7.47□□□□□ -1.21
RTTN-220ENST00000640654 TXKP42681 527 aa7.47□□□□□ -1.21
RTTN-220ENST00000640654 MCM6Q14566 821 aa7.47□□□□□ -1.21
RTTN-220ENST00000640654 IGF2-ASQ6U949 168 aa7.47□□□□□ -1.21
RTTN-220ENST00000640654 SLC51AQ86UW1 340 aa7.47□□□□□ -1.21
RTTN-220ENST00000640654 FRRS1LQ9P0K9 344 aa7.47□□□□□ -1.21
RTTN-220ENST00000640654 PALM3A6NDB9 673 aaPredicted RBP7.46□□□□□ -1.22
RTTN-220ENST00000640654 IER5Q5VY09 327 aa7.46□□□□□ -1.22
RTTN-220ENST00000640654 ELMSAN1Q6PJG2 1045 aa7.46□□□□□ -1.22
RTTN-220ENST00000640654 PRR23CQ6ZRP0 262 aa7.46□□□□□ -1.22
RTTN-220ENST00000640654 PLEKHM2Q8IWE5 1019 aa7.46□□□□□ -1.22
RTTN-220ENST00000640654 LARGE2Q8N3Y3 721 aa7.46□□□□□ -1.22
RTTN-220ENST00000640654 NGLY1Q96IV0 654 aa7.46□□□□□ -1.22
RTTN-220ENST00000640654 KRTAP9-9Q9BYP9 154 aa7.46□□□□□ -1.22
RTTN-220ENST00000640654 KRTAP9-4Q9BYQ2 154 aa7.46□□□□□ -1.22
RTTN-220ENST00000640654 KIAA1024Q9UPX6 916 aa7.46□□□□□ -1.22
RTTN-220ENST00000640654 CECR2Q9BXF3 1484 aa7.46□□□□□ -1.22
RTTN-220ENST00000640654 USP17L3A6NCW0 530 aa7.45□□□□□ -1.22
RTTN-220ENST00000640654 USP17L4A6NCW7 530 aa7.45□□□□□ -1.22
RTTN-220ENST00000640654 ZBTB7BO15156 539 aaPredicted RBP7.45□□□□□ -1.22
RTTN-220ENST00000640654 ARID4AP29374 1257 aaPredicted RBP7.45□□□□□ -1.22
RTTN-220ENST00000640654 USP17L2Q6R6M4 530 aa7.45□□□□□ -1.22
RTTN-220ENST00000640654 USP17L1Q7RTZ2 530 aa7.45□□□□□ -1.22
RTTN-220ENST00000640654 STAG2Q8N3U4 1231 aa7.45□□□□□ -1.22
RTTN-220ENST00000640654 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
RTTN-220ENST00000640654 COG6Q9Y2V7 657 aa7.45□□□□□ -1.22
RTTN-220ENST00000640654 MROH2BQ7Z745 1585 aa7.45□□□□□ -1.22
RTTN-220ENST00000640654 COL17A1Q9UMD9 1497 aaPredicted RBP7.44□□□□□ -1.22
RTTN-220ENST00000640654 CLDN10P78369 228 aa7.44□□□□□ -1.22
RTTN-220ENST00000640654 OGFOD1Q8N543 542 aa7.44□□□□□ -1.22
RTTN-220ENST00000640654 TSEN2Q8NCE0 465 aaKnown RBP7.44□□□□□ -1.22
RTTN-220ENST00000640654 MEGF10Q96KG7 1140 aa7.44□□□□□ -1.22
RTTN-220ENST00000640654 TGFBR3LH3BV60 316 aa7.43□□□□□ -1.22
RTTN-220ENST00000640654 PTCD1O75127 700 aaKnown RBP7.43□□□□□ -1.22
RTTN-220ENST00000640654 COBLO75128 1261 aa7.43□□□□□ -1.22
RTTN-220ENST00000640654 FSTP19883 344 aa7.43□□□□□ -1.22
RTTN-220ENST00000640654 TRIM26Q12899 539 aaPredicted RBP7.43□□□□□ -1.22
RTTN-220ENST00000640654 RTN1Q16799 776 aa7.43□□□□□ -1.22
RTTN-220ENST00000640654 ILDR2Q71H61 639 aa7.43□□□□□ -1.22
RTTN-220ENST00000640654 CHMP7Q8WUX9 453 aaPredicted RBP7.43□□□□□ -1.22
RTTN-220ENST00000640654 LPIN3Q9BQK8 851 aa7.43□□□□□ -1.22
RTTN-220ENST00000640654 C2orf49Q9BVC5 232 aaPredicted RBP7.43□□□□□ -1.22
RTTN-220ENST00000640654 ATAD2Q6PL18 1390 aa7.43□□□□□ -1.22
RTTN-220ENST00000640654 MAP3K6O95382 1288 aa7.42□□□□□ -1.22
RTTN-220ENST00000640654 YBX3P16989 372 aaKnown RBP eCLIP7.42□□□□□ -1.22
RTTN-220ENST00000640654 SSTR4P31391 388 aa7.42□□□□□ -1.22
RTTN-220ENST00000640654 IRAK1P51617 712 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms