RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 ZNF34Q8IZ26 560 aa11□□□□□ -0.65
HLA-B-258ENST00000640615 FLAD1Q8NFF5 587 aa11□□□□□ -0.65
HLA-B-258ENST00000640615 JARID2Q92833 1246 aaPredicted RBP11□□□□□ -0.65
HLA-B-258ENST00000640615 NIP7Q9Y221 180 aaKnown RBP eCLIP11□□□□□ -0.65
HLA-B-258ENST00000640615 PCDHB15Q9Y5E8 787 aa11□□□□□ -0.65
HLA-B-258ENST00000640615 RGL2O15211 777 aa10.99□□□□□ -0.65
HLA-B-258ENST00000640615 BICDL1Q6ZP65 573 aa10.99□□□□□ -0.65
HLA-B-258ENST00000640615 NLRP10Q86W26 655 aa10.99□□□□□ -0.65
HLA-B-258ENST00000640615 BCL2L12Q9HB09 334 aa10.99□□□□□ -0.65
HLA-B-258ENST00000640615 PPP1R1BQ9UD71 204 aaPredicted RBP10.99□□□□□ -0.65
HLA-B-258ENST00000640615 HDAC5Q9UQL6 1122 aa10.99□□□□□ -0.65
HLA-B-258ENST00000640615 LRRFIP2Q9Y608 721 aaKnown RBP10.99□□□□□ -0.65
HLA-B-258ENST00000640615 TAF1LQ8IZX4 1826 aa10.99□□□□□ -0.65
HLA-B-258ENST00000640615 USP42Q9H9J4 1324 aaKnown RBP10.99□□□□□ -0.65
HLA-B-258ENST00000640615 UTRNP46939 3433 aa10.98□□□□□ -0.65
HLA-B-258ENST00000640615 FAM177BA6PVY3 158 aa10.98□□□□□ -0.65
HLA-B-258ENST00000640615 H7C1W4 665 aa10.98□□□□□ -0.65
HLA-B-258ENST00000640615 PARP10Q53GL7 1025 aa10.98□□□□□ -0.65
HLA-B-258ENST00000640615 RTL5Q5HYW3 569 aaPredicted RBP10.98□□□□□ -0.65
HLA-B-258ENST00000640615 TBC1D9BQ66K14 1250 aa10.98□□□□□ -0.65
HLA-B-258ENST00000640615 UBE3BQ7Z3V4 1068 aa10.98□□□□□ -0.65
HLA-B-258ENST00000640615 COL23A1Q86Y22 540 aaPredicted RBP10.98□□□□□ -0.65
HLA-B-258ENST00000640615 UTYO14607 1347 aa10.98□□□□□ -0.65
HLA-B-258ENST00000640615 IBTKQ9P2D0 1353 aaPredicted RBP10.98□□□□□ -0.65
HLA-B-258ENST00000640615 ARFGEF2Q9Y6D5 1785 aa10.98□□□□□ -0.65
HLA-B-258ENST00000640615 SUSD4Q5VX71 490 aa10.97□□□□□ -0.65
HLA-B-258ENST00000640615 CEP85Q6P2H3 762 aa10.97□□□□□ -0.65
HLA-B-258ENST00000640615 PPP1R42Q7Z4L9 355 aa10.97□□□□□ -0.65
HLA-B-258ENST00000640615 RPAP2Q8IXW5 612 aaPredicted RBP10.97□□□□□ -0.65
HLA-B-258ENST00000640615 ZBTB38Q8NAP3 1195 aaPredicted RBP10.97□□□□□ -0.65
HLA-B-258ENST00000640615 SUCLG2Q96I99 432 aa10.97□□□□□ -0.65
HLA-B-258ENST00000640615 SETDB2Q96T68 719 aa10.97□□□□□ -0.65
HLA-B-258ENST00000640615 UTP14AQ9BVJ6 771 aaKnown RBP10.97□□□□□ -0.65
HLA-B-258ENST00000640615 MTFR1LQ9H019 292 aa10.97□□□□□ -0.65
HLA-B-258ENST00000640615 RWDD1Q9H446 243 aaPredicted RBP10.97□□□□□ -0.65
HLA-B-258ENST00000640615 TRMT112Q9UI30 125 aaKnown RBP10.97□□□□□ -0.65
HLA-B-258ENST00000640615 UBN2Q6ZU65 1347 aa10.97□□□□□ -0.65
HLA-B-258ENST00000640615 PNPLA7Q6ZV29 1317 aa10.96□□□□□ -0.65
HLA-B-258ENST00000640615 ZBTB7AO95365 584 aa10.96□□□□□ -0.65
HLA-B-258ENST00000640615 IGHDP01880 384 aa10.96□□□□□ -0.65
HLA-B-258ENST00000640615 PCCAP05165 728 aaPredicted RBP10.96□□□□□ -0.65
HLA-B-258ENST00000640615 GYS1P13807 737 aa10.96□□□□□ -0.65
HLA-B-258ENST00000640615 CASP7P55210 303 aa10.96□□□□□ -0.65
HLA-B-258ENST00000640615 FAM89AQ96GI7 184 aa10.96□□□□□ -0.65
HLA-B-258ENST00000640615 ATP8B2P98198 1209 aa10.95□□□□□ -0.66
HLA-B-258ENST00000640615 NFIXQ14938 502 aa10.95□□□□□ -0.66
HLA-B-258ENST00000640615 SIRT2Q8IXJ6 389 aa10.95□□□□□ -0.66
HLA-B-258ENST00000640615 SYNE4Q8N205 404 aa10.95□□□□□ -0.66
HLA-B-258ENST00000640615 ANKRD44Q8N8A2 993 aa10.95□□□□□ -0.66
HLA-B-258ENST00000640615 SYT17Q9BSW7 474 aa10.95□□□□□ -0.66
HLA-B-258ENST00000640615 BICC1Q9H694 974 aaKnown RBP10.95□□□□□ -0.66
HLA-B-258ENST00000640615 CHD4Q14839 1912 aa10.95□□□□□ -0.66
HLA-B-258ENST00000640615 SH3TC1Q8TE82 1336 aa10.94□□□□□ -0.66
HLA-B-258ENST00000640615 DCAF8L1A6NGE4 600 aa10.94□□□□□ -0.66
HLA-B-258ENST00000640615 IRS4O14654 1257 aaPredicted RBP10.94□□□□□ -0.66
HLA-B-258ENST00000640615 NPHP1O15259 732 aa10.94□□□□□ -0.66
HLA-B-258ENST00000640615 HMMRO75330 724 aa10.94□□□□□ -0.66
HLA-B-258ENST00000640615 NTSR2O95665 410 aa10.94□□□□□ -0.66
HLA-B-258ENST00000640615 GTF2E1P29083 439 aaPredicted RBP10.94□□□□□ -0.66
HLA-B-258ENST00000640615 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
HLA-B-258ENST00000640615 EPHA10Q5JZY3 1008 aa10.94□□□□□ -0.66
HLA-B-258ENST00000640615 NBPF5PQ86XG9 351 aaPredicted RBP10.94□□□□□ -0.66
HLA-B-258ENST00000640615 NLGN1Q8N2Q7 840 aa10.94□□□□□ -0.66
HLA-B-258ENST00000640615 KAZALD1Q96I82 304 aa10.94□□□□□ -0.66
HLA-B-258ENST00000640615 UBR3Q6ZT12 1888 aa10.93□□□□□ -0.66
HLA-B-258ENST00000640615 N4BP2Q86UW6 1770 aaPredicted RBP10.93□□□□□ -0.66
HLA-B-258ENST00000640615 CDHR2Q9BYE9 1310 aa10.93□□□□□ -0.66
HLA-B-258ENST00000640615 PNMA6EA0A0J9YXQ4 647 aa10.93□□□□□ -0.66
HLA-B-258ENST00000640615 SRGAP3O43295 1099 aa10.93□□□□□ -0.66
HLA-B-258ENST00000640615 FOXO4P98177 505 aa10.93□□□□□ -0.66
HLA-B-258ENST00000640615 TPTE2Q6XPS3 522 aa10.93□□□□□ -0.66
HLA-B-258ENST00000640615 NUTM1Q86Y26 1132 aa10.93□□□□□ -0.66
HLA-B-258ENST00000640615 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
HLA-B-258ENST00000640615 NYXQ9GZU5 481 aa10.93□□□□□ -0.66
HLA-B-258ENST00000640615 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
HLA-B-258ENST00000640615 TUBGCP6Q96RT7 1819 aa10.93□□□□□ -0.66
HLA-B-258ENST00000640615 SCN7AQ01118 1682 aa10.92□□□□□ -0.66
HLA-B-258ENST00000640615 HCLS1P14317 486 aaPredicted RBP10.92□□□□□ -0.66
HLA-B-258ENST00000640615 HSP90B1P14625 803 aaKnown RBP10.92□□□□□ -0.66
HLA-B-258ENST00000640615 TM4SF1P30408 202 aa10.92□□□□□ -0.66
HLA-B-258ENST00000640615 ERFEQ4G0M1 354 aa10.92□□□□□ -0.66
HLA-B-258ENST00000640615 MSL1Q68DK7 614 aa10.92□□□□□ -0.66
HLA-B-258ENST00000640615 LMBR1LQ6UX01 489 aa10.92□□□□□ -0.66
HLA-B-258ENST00000640615 CENPQQ7L2Z9 268 aaPredicted RBP10.92□□□□□ -0.66
HLA-B-258ENST00000640615 SLC16A10Q8TF71 515 aa10.92□□□□□ -0.66
HLA-B-258ENST00000640615 PLA2G12BQ9BX93 195 aa10.92□□□□□ -0.66
HLA-B-258ENST00000640615 CHMP3Q9Y3E7 222 aa10.92□□□□□ -0.66
HLA-B-258ENST00000640615 NUP98P52948 1817 aa10.92□□□□□ -0.66
HLA-B-258ENST00000640615 BCORQ6W2J9 1755 aa10.92□□□□□ -0.66
HLA-B-258ENST00000640615 CARMIL3Q8ND23 1372 aa10.91□□□□□ -0.66
HLA-B-258ENST00000640615 AFDNP55196 1824 aaKnown RBP10.91□□□□□ -0.66
HLA-B-258ENST00000640615 KDM2BQ8NHM5 1336 aa10.91□□□□□ -0.66
HLA-B-258ENST00000640615 PDE8AO60658 829 aa10.91□□□□□ -0.66
HLA-B-258ENST00000640615 SERPINB2P05120 415 aa10.91□□□□□ -0.66
HLA-B-258ENST00000640615 MTX1Q13505 466 aa10.91□□□□□ -0.66
HLA-B-258ENST00000640615 POLA2Q14181 598 aa10.91□□□□□ -0.66
HLA-B-258ENST00000640615 RABL6Q3YEC7 729 aaPredicted RBP10.91□□□□□ -0.66
HLA-B-258ENST00000640615 CCDC24Q8N4L8 307 aa10.91□□□□□ -0.66
HLA-B-258ENST00000640615 SSH3Q8TE77 659 aa10.91□□□□□ -0.66
HLA-B-258ENST00000640615 CCDC85AQ96PX6 553 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms