RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 PPP1R12BO60237 982 aaPredicted RBP8.58□□□□□ -1.04
AP3S1-209ENST00000640413 MBTPS1Q14703 1052 aa8.58□□□□□ -1.04
AP3S1-209ENST00000640413 SHISA2Q6UWI4 295 aa8.58□□□□□ -1.04
AP3S1-209ENST00000640413 JPH1Q9HDC5 661 aaPredicted RBP8.58□□□□□ -1.04
AP3S1-209ENST00000640413 C21orf2O43822 256 aa8.57□□□□□ -1.04
AP3S1-209ENST00000640413 ALDH16A1Q8IZ83 802 aa8.57□□□□□ -1.04
AP3S1-209ENST00000640413 UCN2Q96RP3 112 aa8.57□□□□□ -1.04
AP3S1-209ENST00000640413 MKRN1Q9UHC7 482 aaKnown RBP8.57□□□□□ -1.04
AP3S1-209ENST00000640413 SLC6A14Q9UN76 642 aa8.57□□□□□ -1.04
AP3S1-209ENST00000640413 ELNP15502 786 aa8.56□□□□□ -1.04
AP3S1-209ENST00000640413 HDGFL1Q5TGJ6 251 aa8.56□□□□□ -1.04
AP3S1-209ENST00000640413 BTLAQ7Z6A9 289 aa8.56□□□□□ -1.04
AP3S1-209ENST00000640413 LARGE2Q8N3Y3 721 aa8.56□□□□□ -1.04
AP3S1-209ENST00000640413 NGLY1Q96IV0 654 aa8.56□□□□□ -1.04
AP3S1-209ENST00000640413 ZNF594Q96JF6 807 aaPredicted RBP8.56□□□□□ -1.04
AP3S1-209ENST00000640413 PALM3A6NDB9 673 aaPredicted RBP8.55□□□□□ -1.04
AP3S1-209ENST00000640413 M0R2N6 131 aa8.55□□□□□ -1.04
AP3S1-209ENST00000640413 TXNRD3Q86VQ6 643 aa8.55□□□□□ -1.04
AP3S1-209ENST00000640413 DNAJB12Q9NXW2 375 aaKnown RBP8.55□□□□□ -1.04
AP3S1-209ENST00000640413 ATAD2Q6PL18 1390 aa8.54□□□□□ -1.04
AP3S1-209ENST00000640413 ATP9BO43861 1147 aa8.54□□□□□ -1.04
AP3S1-209ENST00000640413 RAD21O60216 631 aa8.54□□□□□ -1.04
AP3S1-209ENST00000640413 DKK1O94907 266 aa8.54□□□□□ -1.04
AP3S1-209ENST00000640413 RAC1P63000 192 aa8.54□□□□□ -1.04
AP3S1-209ENST00000640413 PSAPL1Q6NUJ1 521 aa8.54□□□□□ -1.04
AP3S1-209ENST00000640413 DMRTC2Q8IXT2 367 aaPredicted RBP8.54□□□□□ -1.04
AP3S1-209ENST00000640413 CHMP7Q8WUX9 453 aaPredicted RBP8.54□□□□□ -1.04
AP3S1-209ENST00000640413 LENG1Q96BZ8 264 aaPredicted RBP8.54□□□□□ -1.04
AP3S1-209ENST00000640413 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
AP3S1-209ENST00000640413 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
AP3S1-209ENST00000640413 AFF1P51825 1210 aaKnown RBP8.53□□□□□ -1.04
AP3S1-209ENST00000640413 NBPF11Q86T75 865 aa8.53□□□□□ -1.04
AP3S1-209ENST00000640413 SIX5Q8N196 739 aa8.53□□□□□ -1.04
AP3S1-209ENST00000640413 SCG3Q8WXD2 468 aaKnown RBP8.53□□□□□ -1.04
AP3S1-209ENST00000640413 TP53INP1Q96A56 240 aa8.53□□□□□ -1.04
AP3S1-209ENST00000640413 C2orf49Q9BVC5 232 aaPredicted RBP8.53□□□□□ -1.04
AP3S1-209ENST00000640413 GSX2Q9BZM3 304 aa8.53□□□□□ -1.04
AP3S1-209ENST00000640413 NAGPAQ9UK23 515 aa8.53□□□□□ -1.04
AP3S1-209ENST00000640413 USP21Q9UK80 565 aa8.52□□□□□ -1.05
AP3S1-209ENST00000640413 NFKB1P19838 968 aa8.51□□□□□ -1.05
AP3S1-209ENST00000640413 NRG1Q02297 640 aaPredicted RBP8.51□□□□□ -1.05
AP3S1-209ENST00000640413 FMR1NBQ8N0W7 255 aaPredicted RBP8.51□□□□□ -1.05
AP3S1-209ENST00000640413 PNMA5Q96PV4 448 aa8.51□□□□□ -1.05
AP3S1-209ENST00000640413 RBM19Q9Y4C8 960 aaKnown RBP8.51□□□□□ -1.05
AP3S1-209ENST00000640413 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.51□□□□□ -1.05
AP3S1-209ENST00000640413 LGR5O75473 907 aa8.5□□□□□ -1.05
AP3S1-209ENST00000640413 RGS9O75916 674 aaPredicted RBP8.5□□□□□ -1.05
AP3S1-209ENST00000640413 STAG2Q8N3U4 1231 aa8.5□□□□□ -1.05
AP3S1-209ENST00000640413 GAS2L2Q8NHY3 880 aa8.5□□□□□ -1.05
AP3S1-209ENST00000640413 CCINQ13939 588 aa8.49□□□□□ -1.05
AP3S1-209ENST00000640413 ILDR2Q71H61 639 aa8.49□□□□□ -1.05
AP3S1-209ENST00000640413 BCS1LQ9Y276 419 aa8.49□□□□□ -1.05
AP3S1-209ENST00000640413 HYAL3O43820 417 aaPredicted RBP8.48□□□□□ -1.05
AP3S1-209ENST00000640413 UBTFP17480 764 aaKnown RBP8.48□□□□□ -1.05
AP3S1-209ENST00000640413 RASA1P20936 1047 aa8.48□□□□□ -1.05
AP3S1-209ENST00000640413 LRP8Q14114 963 aa8.48□□□□□ -1.05
AP3S1-209ENST00000640413 HIF1AQ16665 826 aa8.48□□□□□ -1.05
AP3S1-209ENST00000640413 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
AP3S1-209ENST00000640413 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
AP3S1-209ENST00000640413 CPB1P15086 417 aa8.47□□□□□ -1.05
AP3S1-209ENST00000640413 GRNP28799 593 aaKnown RBP8.47□□□□□ -1.05
AP3S1-209ENST00000640413 SEC13P55735 322 aa8.47□□□□□ -1.05
AP3S1-209ENST00000640413 FAM35AQ86V20 835 aa8.47□□□□□ -1.05
AP3S1-209ENST00000640413 KRTAP1-3Q8IUG1 177 aa8.47□□□□□ -1.05
AP3S1-209ENST00000640413 DMGDHQ9UI17 866 aaKnown RBP8.47□□□□□ -1.05
AP3S1-209ENST00000640413 TGFBR3LH3BV60 316 aa8.46□□□□□ -1.06
AP3S1-209ENST00000640413 PLAURQ03405 335 aa8.46□□□□□ -1.06
AP3S1-209ENST00000640413 RTN1Q16799 776 aa8.46□□□□□ -1.06
AP3S1-209ENST00000640413 IER5Q5VY09 327 aa8.46□□□□□ -1.06
AP3S1-209ENST00000640413 MSL1Q68DK7 614 aa8.46□□□□□ -1.06
AP3S1-209ENST00000640413 KRT25Q7Z3Z0 450 aa8.46□□□□□ -1.06
AP3S1-209ENST00000640413 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
AP3S1-209ENST00000640413 IREB2P48200 963 aaKnown RBP8.45□□□□□ -1.06
AP3S1-209ENST00000640413 GRIK5Q16478 980 aa8.45□□□□□ -1.06
AP3S1-209ENST00000640413 WFDC12Q8WWY7 111 aa8.45□□□□□ -1.06
AP3S1-209ENST00000640413 LPIN3Q9BQK8 851 aa8.45□□□□□ -1.06
AP3S1-209ENST00000640413 TFIP11Q9UBB9 837 aaKnown RBP8.45□□□□□ -1.06
AP3S1-209ENST00000640413 ZBTB42B2RXF5 422 aa8.44□□□□□ -1.06
AP3S1-209ENST00000640413 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
AP3S1-209ENST00000640413 PERM1Q5SV97 790 aa8.44□□□□□ -1.06
AP3S1-209ENST00000640413 KLK14Q9P0G3 267 aa8.44□□□□□ -1.06
AP3S1-209ENST00000640413 ZFATQ9P243 1243 aa8.44□□□□□ -1.06
AP3S1-209ENST00000640413 FBXO11Q86XK2 927 aa8.43□□□□□ -1.06
AP3S1-209ENST00000640413 TARSP26639 723 aaKnown RBP8.42□□□□□ -1.06
AP3S1-209ENST00000640413 NOS3P29474 1203 aa8.42□□□□□ -1.06
AP3S1-209ENST00000640413 INPP5BP32019 993 aa8.42□□□□□ -1.06
AP3S1-209ENST00000640413 IDH3AP50213 366 aa8.42□□□□□ -1.06
AP3S1-209ENST00000640413 KRTAP4-12Q9BQ66 201 aa8.42□□□□□ -1.06
AP3S1-209ENST00000640413 MAFBQ9Y5Q3 323 aaPredicted RBP8.42□□□□□ -1.06
AP3S1-209ENST00000640413 MAP3K6O95382 1288 aa8.41□□□□□ -1.06
AP3S1-209ENST00000640413 EPB42P16452 691 aa8.41□□□□□ -1.06
AP3S1-209ENST00000640413 FLIIQ13045 1269 aa8.41□□□□□ -1.06
AP3S1-209ENST00000640413 ELMSAN1Q6PJG2 1045 aa8.41□□□□□ -1.06
AP3S1-209ENST00000640413 LARP1Q6PKG0 1096 aaKnown RBP8.41□□□□□ -1.06
AP3S1-209ENST00000640413 DHX32Q7L7V1 743 aaKnown RBP8.41□□□□□ -1.06
AP3S1-209ENST00000640413 WFDC8Q8IUA0 241 aa8.41□□□□□ -1.06
AP3S1-209ENST00000640413 IFT43Q96FT9 208 aa8.41□□□□□ -1.06
AP3S1-209ENST00000640413 FRRS1LQ9P0K9 344 aa8.41□□□□□ -1.06
AP3S1-209ENST00000640413 SASH3O75995 380 aa8.4□□□□□ -1.06
AP3S1-209ENST00000640413 DPYDQ12882 1025 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms