RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 ZNF408Q9H9D4 720 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 ISM2Q6H9L7 571 aa17■□□□□ 0.31
HNRNPU-226ENST00000640218 KIF5BP33176 963 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 METAP2P50579 478 aaKnown RBP eCLIP16.99■□□□□ 0.318e-11■□□□□ 9.1
HNRNPU-226ENST00000640218 PDE4BQ07343 736 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 FEZ1Q99689 392 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 ACEP12821 1306 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 USO1O60763 962 aaKnown RBP16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 KIF20AO95235 890 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 TNNT1P13805 278 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 DDX19AQ9NUU7 478 aaKnown RBP16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 YEATS4O95619 227 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 SLC26A6Q9BXS9 759 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 ORC3Q9UBD5 711 aaPredicted RBP16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 BAG3O95817 575 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 HSPA2P54652 639 aa16.99■□□□□ 0.31
HNRNPU-226ENST00000640218 CCDC12Q8WUD4 166 aaPredicted RBP16.98■□□□□ 0.31
HNRNPU-226ENST00000640218 FBLN1P23142 703 aa16.98■□□□□ 0.31
HNRNPU-226ENST00000640218 MACROD2A1Z1Q3 448 aa16.98■□□□□ 0.31
HNRNPU-226ENST00000640218 IDEP14735 1019 aa16.98■□□□□ 0.31
HNRNPU-226ENST00000640218 NCOA7Q8NI08 942 aa16.98■□□□□ 0.31
HNRNPU-226ENST00000640218 LDHCP07864 332 aa16.98■□□□□ 0.31
HNRNPU-226ENST00000640218 SPTY2D1Q68D10 685 aaPredicted RBP16.98■□□□□ 0.31
HNRNPU-226ENST00000640218 NCOA1Q15788 1441 aa16.98■□□□□ 0.31
HNRNPU-226ENST00000640218 NSD2O96028 1365 aa16.98■□□□□ 0.31
HNRNPU-226ENST00000640218 GSTTP1A0A1W2PQM5 241 aa16.98■□□□□ 0.31
HNRNPU-226ENST00000640218 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
HNRNPU-226ENST00000640218 MAP9Q49MG5 647 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 TTC22Q5TAA0 569 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 TCERG1LQ5VWI1 586 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 TMC6Q7Z403 805 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 AMPD3Q01432 767 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 MAP2K1Q02750 393 aaPredicted RBP16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 PODXL2Q9NZ53 605 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 RFC4P35249 363 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 STX1AQ16623 288 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 BMP2KLQ5H9B9 411 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 CUL7Q14999 1698 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 PAFAH1B1P43034 410 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 CCDC40Q4G0X9 1142 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 CCDC91Q7Z6B0 441 aa16.97■□□□□ 0.31
HNRNPU-226ENST00000640218 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
HNRNPU-226ENST00000640218 IGHDP01880 384 aa16.96■□□□□ 0.31
HNRNPU-226ENST00000640218 IFFO1Q0D2I5 559 aa16.96■□□□□ 0.31
HNRNPU-226ENST00000640218 RBM26Q5T8P6 1007 aaKnown RBP16.96■□□□□ 0.31
HNRNPU-226ENST00000640218 ANKRD13DQ6ZTN6 518 aa16.96■□□□□ 0.31
HNRNPU-226ENST00000640218 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.3
HNRNPU-226ENST00000640218 BCCIPQ9P287 314 aaKnown RBP eCLIP16.96■□□□□ 0.3
HNRNPU-226ENST00000640218 USP8P40818 1118 aa16.95■□□□□ 0.3
HNRNPU-226ENST00000640218 CABP5Q9NP86 173 aa16.95■□□□□ 0.3
HNRNPU-226ENST00000640218 SAMM50Q9Y512 469 aa16.95■□□□□ 0.3
HNRNPU-226ENST00000640218 UBA7P41226 1012 aa16.95■□□□□ 0.3
HNRNPU-226ENST00000640218 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
HNRNPU-226ENST00000640218 HLA-DOAP06340 250 aa16.95■□□□□ 0.3
HNRNPU-226ENST00000640218 C16orf45Q96MC5 204 aaPredicted RBP16.95■□□□□ 0.3
HNRNPU-226ENST00000640218 HMG20BQ9P0W2 317 aa16.95■□□□□ 0.3
HNRNPU-226ENST00000640218 CHPF2Q9P2E5 772 aa16.95■□□□□ 0.3
HNRNPU-226ENST00000640218 CETN1Q12798 172 aa16.94■□□□□ 0.3
HNRNPU-226ENST00000640218 RBM27Q9P2N5 1060 aaKnown RBP16.94■□□□□ 0.3
HNRNPU-226ENST00000640218 SYCP3Q8IZU3 236 aa16.94■□□□□ 0.3
HNRNPU-226ENST00000640218 MCM3P25205 808 aa16.94■□□□□ 0.3
HNRNPU-226ENST00000640218 GPR162Q16538 588 aa16.94■□□□□ 0.3
HNRNPU-226ENST00000640218 ZNF526Q8TF50 670 aaPredicted RBP16.94■□□□□ 0.3
HNRNPU-226ENST00000640218 TMCO5BA8MYB1 307 aa16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 CRNKL1Q9BZJ0 848 aaKnown RBP16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 CCDC152Q4G0S7 254 aa16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 RHPN1Q8TCX5 695 aa16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 MCM5P33992 734 aa16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 SHTN1A0MZ66 631 aa16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 ADCY5O95622 1261 aa16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 CTNNA2P26232 953 aa16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 UQCRFS1P1P0C7P4 283 aa16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 NBPF6Q5VWK0 638 aa16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 NBPF5PQ86XG9 351 aaPredicted RBP16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 NBPF4Q96M43 638 aa16.93■□□□□ 0.3
HNRNPU-226ENST00000640218 NECAB1Q8N987 351 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 FERMT2Q96AC1 680 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 STX8Q9UNK0 236 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 RFX1P22670 979 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 GSDMDP57764 484 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 ST5P78524 1137 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 PRC1O43663 620 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 WTAPQ15007 396 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 CCDC102BQ68D86 513 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 ANKRD36BQ8N2N9 1353 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 IL16Q14005 1332 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 HOOK3Q86VS8 718 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 MEIS3Q99687 375 aa16.92■□□□□ 0.3
HNRNPU-226ENST00000640218 KLF18A0A0U1RQI7 1052 aa16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 NOP2P46087 812 aaKnown RBP16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 ALS2CR12Q96Q35 445 aa16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 LRRC2Q9BYS8 371 aa16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 GOLGA6L10A0A0M3HER8 536 aa16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 ZNF165P49910 485 aa16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 KANK3Q6NY19 840 aa16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 UBE2HP62256 183 aa16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 PRPF4BQ13523 1007 aaKnown RBP16.91■□□□□ 0.3
HNRNPU-226ENST00000640218 FAM114A1Q8IWE2 563 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms