RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 METTL22Q9BUU2 404 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-225ENST00000640209 GADD45BO75293 160 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-225ENST00000640209 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
NECAP1-225ENST00000640209 NMIQ13287 307 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-225ENST00000640209 BOLA2Q9H3K6 86 aa11.3□□□□□ -0.6
NECAP1-225ENST00000640209 EVI5LQ96CN4 794 aa11.29□□□□□ -0.6
NECAP1-225ENST00000640209 EDC3Q96F86 508 aaKnown RBP11.29□□□□□ -0.6
NECAP1-225ENST00000640209 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
NECAP1-225ENST00000640209 A0A0D9SFI3 127 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 SYCE3A1L190 88 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 ATP5J2-PTCD1G3V325 749 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 PTCD1O75127 700 aaKnown RBP11.28□□□□□ -0.6
NECAP1-225ENST00000640209 SNRPA1P09661 255 aaKnown RBP11.28□□□□□ -0.6
NECAP1-225ENST00000640209 RFX5P48382 616 aaPredicted RBP11.28□□□□□ -0.6
NECAP1-225ENST00000640209 ST3GAL1Q11201 340 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 NECTIN1Q15223 517 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 JAKMIP1Q96N16 626 aaKnown RBP11.28□□□□□ -0.6
NECAP1-225ENST00000640209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.28□□□□□ -0.6
NECAP1-225ENST00000640209 CCDC171Q6TFL3 1326 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 CHGBP05060 677 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 KCNB2Q92953 911 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 GPATCH3Q96I76 525 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 PPP1R9BQ96SB3 815 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 LIMCH1Q9UPQ0 1083 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
NECAP1-225ENST00000640209 ESPNB1AK53 854 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 CLCN1P35523 988 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 NEXNQ0ZGT2 675 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 UBE3BQ7Z3V4 1068 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 RUFY2Q8WXA3 655 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 DCAF5Q96JK2 942 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 HDAC5Q9UQL6 1122 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 RBM8AQ9Y5S9 174 aaKnown RBP11.27□□□□□ -0.61
NECAP1-225ENST00000640209 MRC1P22897 1456 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 TNS3Q68CZ2 1445 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 GLI3P10071 1580 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 SPATA31A3Q5VYP0 1347 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 TCHHQ07283 1943 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 TTC5Q8N0Z6 440 aa11.27□□□□□ -0.61
NECAP1-225ENST00000640209 HSPA2P54652 639 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 CABP4P57796 275 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 PTPN12Q05209 780 aaKnown RBP11.26□□□□□ -0.61
NECAP1-225ENST00000640209 CREB3L3Q68CJ9 461 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 ZSWIM6Q9HCJ5 1215 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 WDR33Q9C0J8 1336 aaKnown RBP11.26□□□□□ -0.61
NECAP1-225ENST00000640209 NBPF26B4DH59 902 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 SYT1P21579 422 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 CCDC173Q0VFZ6 552 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 TFCP2Q12800 502 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 NBPF14Q5TI25 921 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
NECAP1-225ENST00000640209 LRSAM1Q6UWE0 723 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 ZNF589Q86UQ0 364 aaPredicted RBP11.26□□□□□ -0.61
NECAP1-225ENST00000640209 NBPF15Q8N660 670 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 MAP4K1Q92918 833 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 FMNL2Q96PY5 1086 aa11.26□□□□□ -0.61
NECAP1-225ENST00000640209 DBNLQ9UJU6 430 aaKnown RBP11.26□□□□□ -0.61
NECAP1-225ENST00000640209 SLC27A2O14975 620 aa11.25□□□□□ -0.61
NECAP1-225ENST00000640209 CASP7P55210 303 aa11.25□□□□□ -0.61
NECAP1-225ENST00000640209 NECAB1Q8N987 351 aa11.25□□□□□ -0.61
NECAP1-225ENST00000640209 FSD1Q9BTV5 496 aa11.25□□□□□ -0.61
NECAP1-225ENST00000640209 CNPY2Q9Y2B0 182 aa11.25□□□□□ -0.61
NECAP1-225ENST00000640209 COL15A1P39059 1388 aa11.25□□□□□ -0.61
NECAP1-225ENST00000640209 PKD1L3Q7Z443 1732 aa11.25□□□□□ -0.61
NECAP1-225ENST00000640209 ZSCAN22P10073 491 aaPredicted RBP11.25□□□□□ -0.61
NECAP1-225ENST00000640209 TRIM44Q96DX7 344 aaPredicted RBP11.25□□□□□ -0.61
NECAP1-225ENST00000640209 TCEANC2Q96MN5 208 aa11.25□□□□□ -0.61
NECAP1-225ENST00000640209 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
NECAP1-225ENST00000640209 MBD3O95983 291 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 ME3Q16798 604 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 VPS53Q5VIR6 699 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 SNRKQ9NRH2 765 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 TPCN1Q9ULQ1 816 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 CYP46A1Q9Y6A2 500 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 DCCP43146 1447 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 ABCC6O95255 1503 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 AFDNP55196 1824 aaKnown RBP11.24□□□□□ -0.61
NECAP1-225ENST00000640209 A0A087WZG4 1122 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 STX6O43752 255 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 RABL6Q3YEC7 729 aaPredicted RBP11.24□□□□□ -0.61
NECAP1-225ENST00000640209 TNNI3KQ59H18 835 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 TTLL7Q6ZT98 887 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 CADPS2Q86UW7 1296 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 TM6SF1Q9BZW5 370 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 SMC3Q9UQE7 1217 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 FPGT-TNNI3KV9GXZ4 949 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 MED23Q9ULK4 1368 aa11.24□□□□□ -0.61
NECAP1-225ENST00000640209 ARFGEF2Q9Y6D5 1785 aa11.23□□□□□ -0.61
NECAP1-225ENST00000640209 GJB2P29033 226 aa11.23□□□□□ -0.61
NECAP1-225ENST00000640209 RNF214Q8ND24 703 aa11.23□□□□□ -0.61
NECAP1-225ENST00000640209 DBNDD2Q9BQY9 259 aa11.23□□□□□ -0.61
NECAP1-225ENST00000640209 CPDO75976 1380 aa11.23□□□□□ -0.61
NECAP1-225ENST00000640209 A1BGP04217 495 aa11.23□□□□□ -0.61
NECAP1-225ENST00000640209 KCNJ4P48050 445 aa11.23□□□□□ -0.61
NECAP1-225ENST00000640209 BRINP3Q76B58 766 aa11.23□□□□□ -0.61
NECAP1-225ENST00000640209 CCDC9Q9Y3X0 531 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms