RNA–Protein interactions for RNA: ENST00000639876.1

TRIO-225, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene TRIO, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-225ENST00000639876 RASSF7Q02833 373 aa12.3□□□□□ -0.44
TRIO-225ENST00000639876 DCTN1Q14203 1278 aa12.3□□□□□ -0.44
TRIO-225ENST00000639876 RIPK4P57078 832 aa12.29□□□□□ -0.44
TRIO-225ENST00000639876 FKBP4Q02790 459 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRIO-225ENST00000639876 RRAGCQ9HB90 399 aa12.29□□□□□ -0.44
TRIO-225ENST00000639876 NBPF26B4DH59 902 aa12.28□□□□□ -0.44
TRIO-225ENST00000639876 HSP90B1P14625 803 aaKnown RBP12.28□□□□□ -0.44
TRIO-225ENST00000639876 NBPF10Q6P3W6 841 aaKnown RBP12.28□□□□□ -0.44
TRIO-225ENST00000639876 GIGYF2Q6Y7W6 1299 aaKnown RBP12.28□□□□□ -0.44
TRIO-225ENST00000639876 NBPF15Q8N660 670 aa12.28□□□□□ -0.44
TRIO-225ENST00000639876 RPGRQ92834 1020 aaKnown RBP12.28□□□□□ -0.44
TRIO-225ENST00000639876 RUNDC1Q96C34 613 aa12.28□□□□□ -0.44
TRIO-225ENST00000639876 VPS33BQ9H267 617 aa12.28□□□□□ -0.44
TRIO-225ENST00000639876 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.44
TRIO-225ENST00000639876 TMPOP42166 694 aaKnown RBP12.27□□□□□ -0.45
TRIO-225ENST00000639876 CRY2Q49AN0 593 aa12.27□□□□□ -0.45
TRIO-225ENST00000639876 PSMD1Q99460 953 aa12.27□□□□□ -0.45
TRIO-225ENST00000639876 SCN4AP35499 1836 aa12.27□□□□□ -0.45
TRIO-225ENST00000639876 NUP98P52948 1817 aa12.27□□□□□ -0.45
TRIO-225ENST00000639876 CACNA1SQ13698 1873 aa12.26□□□□□ -0.45
TRIO-225ENST00000639876 TMC4Q7Z404 712 aa12.26□□□□□ -0.45
TRIO-225ENST00000639876 JDP2Q8WYK2 163 aa12.26□□□□□ -0.45
TRIO-225ENST00000639876 RBM17Q96I25 401 aaKnown RBP12.26□□□□□ -0.45
TRIO-225ENST00000639876 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
TRIO-225ENST00000639876 CREBZFQ9NS37 354 aa12.26□□□□□ -0.45
TRIO-225ENST00000639876 RRP7AQ9Y3A4 280 aaKnown RBP12.26□□□□□ -0.45
TRIO-225ENST00000639876 SLX4Q8IY92 1834 aa12.25□□□□□ -0.45
TRIO-225ENST00000639876 PRAMEF22A3QJZ6 481 aa12.25□□□□□ -0.45
TRIO-225ENST00000639876 HOXA10P31260 410 aaPredicted RBP12.25□□□□□ -0.45
TRIO-225ENST00000639876 PNMA8AQ86V59 439 aaPredicted RBP12.25□□□□□ -0.45
TRIO-225ENST00000639876 SUPT20HQ8NEM7 779 aa12.25□□□□□ -0.45
TRIO-225ENST00000639876 KLRG1Q96E93 195 aa12.25□□□□□ -0.45
TRIO-225ENST00000639876 NLRP3Q96P20 1036 aa12.25□□□□□ -0.45
TRIO-225ENST00000639876 CRAMP1Q96RY5 1269 aa12.25□□□□□ -0.45
TRIO-225ENST00000639876 MYL6BP14649 208 aa12.24□□□□□ -0.45
TRIO-225ENST00000639876 PIP4K2AP48426 406 aaPredicted RBP12.24□□□□□ -0.45
TRIO-225ENST00000639876 C7orf43Q8WVR3 580 aa12.24□□□□□ -0.45
TRIO-225ENST00000639876 ANKRD36CQ5JPF3 1778 aa12.23□□□□□ -0.45
TRIO-225ENST00000639876 ZEB1P37275 1124 aaPredicted RBP12.23□□□□□ -0.45
TRIO-225ENST00000639876 IARSP41252 1262 aaKnown RBP12.23□□□□□ -0.45
TRIO-225ENST00000639876 EIF6P56537 245 aaKnown RBP12.23□□□□□ -0.45
TRIO-225ENST00000639876 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
TRIO-225ENST00000639876 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
TRIO-225ENST00000639876 ZNF34Q8IZ26 560 aa12.23□□□□□ -0.45
TRIO-225ENST00000639876 JMYQ8N9B5 988 aa12.23□□□□□ -0.45
TRIO-225ENST00000639876 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
TRIO-225ENST00000639876 DDX21Q9NR30 783 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRIO-225ENST00000639876 MIS18AQ9NYP9 233 aa12.23□□□□□ -0.45
TRIO-225ENST00000639876 CHL1O00533 1208 aa12.22□□□□□ -0.45
TRIO-225ENST00000639876 HLFQ16534 295 aa12.22□□□□□ -0.45
TRIO-225ENST00000639876 IFFO2Q5TF58 517 aa12.22□□□□□ -0.45
TRIO-225ENST00000639876 GPC2Q8N158 579 aa12.22□□□□□ -0.45
TRIO-225ENST00000639876 ZBTB3Q9H5J0 574 aa12.22□□□□□ -0.45
TRIO-225ENST00000639876 DBF4Q9UBU7 674 aaPredicted RBP12.22□□□□□ -0.45
TRIO-225ENST00000639876 NTSR2O95665 410 aa12.21□□□□□ -0.45
TRIO-225ENST00000639876 EIF2S2P20042 333 aaKnown RBP12.21□□□□□ -0.45
TRIO-225ENST00000639876 LMOD1P29536 600 aaPredicted RBP12.21□□□□□ -0.45
TRIO-225ENST00000639876 SLC10A5Q5PT55 438 aa12.21□□□□□ -0.45
TRIO-225ENST00000639876 CCDC24Q8N4L8 307 aa12.21□□□□□ -0.45
TRIO-225ENST00000639876 NGEFQ8N5V2 710 aa12.21□□□□□ -0.45
TRIO-225ENST00000639876 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
TRIO-225ENST00000639876 HYPKQ9NX55 129 aa12.21□□□□□ -0.45
TRIO-225ENST00000639876 HACL1Q9UJ83 578 aa12.21□□□□□ -0.45
TRIO-225ENST00000639876 ABCC12Q96J65 1359 aa12.2□□□□□ -0.46
TRIO-225ENST00000639876 SH3TC1Q8TE82 1336 aa12.2□□□□□ -0.46
TRIO-225ENST00000639876 CDHR2Q9BYE9 1310 aa12.2□□□□□ -0.46
TRIO-225ENST00000639876 FAM177BA6PVY3 158 aa12.2□□□□□ -0.46
TRIO-225ENST00000639876 PPEF1O14829 653 aaPredicted RBP12.2□□□□□ -0.46
TRIO-225ENST00000639876 BBOX1O75936 387 aa12.2□□□□□ -0.46
TRIO-225ENST00000639876 GNAI1P63096 354 aa12.2□□□□□ -0.46
TRIO-225ENST00000639876 HDGFL1Q5TGJ6 251 aa12.2□□□□□ -0.46
TRIO-225ENST00000639876 TTLL7Q6ZT98 887 aa12.2□□□□□ -0.46
TRIO-225ENST00000639876 DNAJC5GQ8N7S2 189 aa12.2□□□□□ -0.46
TRIO-225ENST00000639876 THUMPD2Q9BTF0 503 aaKnown RBP12.2□□□□□ -0.46
TRIO-225ENST00000639876 PRKRIP1Q9H875 184 aaPredicted RBP12.2□□□□□ -0.46
TRIO-225ENST00000639876 UBN2Q6ZU65 1347 aa12.19□□□□□ -0.46
TRIO-225ENST00000639876 FZD9O00144 591 aa12.19□□□□□ -0.46
TRIO-225ENST00000639876 GPTP24298 496 aa12.19□□□□□ -0.46
TRIO-225ENST00000639876 PRELPP51888 382 aa12.19□□□□□ -0.46
TRIO-225ENST00000639876 SUSD4Q5VX71 490 aa12.19□□□□□ -0.46
TRIO-225ENST00000639876 DDX46Q7L014 1031 aaKnown RBP12.19□□□□□ -0.46
TRIO-225ENST00000639876 SYNE4Q8N205 404 aa12.19□□□□□ -0.46
TRIO-225ENST00000639876 PLBD2Q8NHP8 589 aa12.19□□□□□ -0.46
TRIO-225ENST00000639876 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
TRIO-225ENST00000639876 DDNO94850 711 aaPredicted RBP12.18□□□□□ -0.46
TRIO-225ENST00000639876 TCIRG1Q13488 830 aa12.18□□□□□ -0.46
TRIO-225ENST00000639876 NUTM1Q86Y26 1132 aa12.18□□□□□ -0.46
TRIO-225ENST00000639876 NIM1KQ8IY84 436 aa12.18□□□□□ -0.46
TRIO-225ENST00000639876 LARGE2Q8N3Y3 721 aa12.18□□□□□ -0.46
TRIO-225ENST00000639876 TAF1DQ9H5J8 278 aaPredicted RBP12.18□□□□□ -0.46
TRIO-225ENST00000639876 ZNF277Q9NRM2 450 aaPredicted RBP12.18□□□□□ -0.46
TRIO-225ENST00000639876 DDX58O95786 925 aaKnown RBP12.17□□□□□ -0.46
TRIO-225ENST00000639876 EPHX2P34913 555 aa12.17□□□□□ -0.46
TRIO-225ENST00000639876 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
TRIO-225ENST00000639876 PDIA6Q15084 440 aa12.17□□□□□ -0.46
TRIO-225ENST00000639876 COPS6Q7L5N1 327 aa12.17□□□□□ -0.46
TRIO-225ENST00000639876 LRP10Q7Z4F1 713 aa12.17□□□□□ -0.46
TRIO-225ENST00000639876 TRMT112Q9UI30 125 aaKnown RBP12.17□□□□□ -0.46
TRIO-225ENST00000639876 ATP6V0A2Q9Y487 856 aa12.17□□□□□ -0.46
TRIO-225ENST00000639876 SNED1Q8TER0 1413 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms