RNA–Protein interactions for RNA: ENST00000639603.1

STRADA-238, Transcript of STE20-related kinase adaptor alpha, human

TSL 5

Gene STRADA, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-238	ENST00000639603	MAP1S	Q66K74	1059 aa	Predicted RBP	10.17	□□□□□ -0.78
STRADA-238	ENST00000639603	JDP2	Q8WYK2	163 aa		10.17	□□□□□ -0.78
STRADA-238	ENST00000639603	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
STRADA-238	ENST00000639603	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.17	□□□□□ -0.78
STRADA-238	ENST00000639603	SNED1	Q8TER0	1413 aa		10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	CCDC85C	A6NKD9	419 aa		10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	GNAT3	A8MTJ3	354 aa		10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	CA12	O43570	354 aa		10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	DIAPH1	O60610	1272 aa	Known RBP	10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	ALDH1B1	P30837	517 aa		10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	TPTE2	Q6XPS3	522 aa		10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	GAS2L2	Q8NHY3	880 aa		10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	CAPNS2	Q96L46	248 aa		10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	PSMD1	Q99460	953 aa		10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	COL3A1	P02461	1466 aa	Predicted RBP	10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	RIC1	Q4ADV7	1423 aa		10.16	□□□□□ -0.78
STRADA-238	ENST00000639603	DLG5	Q8TDM6	1919 aa		10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	CEMIP	Q8WUJ3	1361 aa		10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	PDE4DIP	Q5VU43	2346 aa		10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	A1BG	P04217	495 aa		10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	MAP2K2	P36507	400 aa		10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	EIF6	P56537	245 aa	Known RBP	10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	GRIPAP1	Q4V328	841 aa		10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	CC2D2B	Q6DHV5	1058 aa		10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	SPOCK2	Q92563	424 aa		10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	GPR101	Q96P66	508 aa	Predicted RBP	10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	LAMB2	P55268	1798 aa		10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	ANKRD36C	Q5JPF3	1778 aa		10.15	□□□□□ -0.78
STRADA-238	ENST00000639603	KDM3B	Q7LBC6	1761 aa		10.14	□□□□□ -0.79
STRADA-238	ENST00000639603	CLSPN	Q9HAW4	1339 aa		10.14	□□□□□ -0.79
STRADA-238	ENST00000639603	DDX60	Q8IY21	1712 aa	Known RBP	10.14	□□□□□ -0.79
STRADA-238	ENST00000639603	USP50	Q70EL3	339 aa	Predicted RBP	10.14	□□□□□ -0.79
STRADA-238	ENST00000639603	SYNE4	Q8N205	404 aa		10.14	□□□□□ -0.79
STRADA-238	ENST00000639603	PIP4P2	Q8N4L2	257 aa		10.14	□□□□□ -0.79
STRADA-238	ENST00000639603	COL4A5	P29400	1685 aa		10.14	□□□□□ -0.79
STRADA-238	ENST00000639603	TNRC18	O15417	2968 aa	Predicted RBP	10.14	□□□□□ -0.79
STRADA-238	ENST00000639603	IL17RE	Q8NFR9	667 aa		10.13	□□□□□ -0.79
STRADA-238	ENST00000639603	HHIPL1	Q96JK4	782 aa		10.13	□□□□□ -0.79
STRADA-238	ENST00000639603	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
STRADA-238	ENST00000639603	TLL2	Q9Y6L7	1015 aa		10.13	□□□□□ -0.79
STRADA-238	ENST00000639603	BTBD11	A6QL63	1104 aa		10.12	□□□□□ -0.79
STRADA-238	ENST00000639603	HSPA5	P11021	654 aa	Known RBP	10.12	□□□□□ -0.79
STRADA-238	ENST00000639603	GTF2E1	P29083	439 aa	Predicted RBP	10.12	□□□□□ -0.79
STRADA-238	ENST00000639603	CYP4F22	Q6NT55	531 aa		10.12	□□□□□ -0.79
STRADA-238	ENST00000639603	NYX	Q9GZU5	481 aa		10.12	□□□□□ -0.79
STRADA-238	ENST00000639603	GJA3	Q9Y6H8	435 aa		10.12	□□□□□ -0.79
STRADA-238	ENST00000639603	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.12	□□□□□ -0.79
STRADA-238	ENST00000639603	POLR2A	P24928	1970 aa	Known RBP	10.12	□□□□□ -0.79
STRADA-238	ENST00000639603	PRKAR2A	P13861	404 aa	Known RBP	10.11	□□□□□ -0.79
STRADA-238	ENST00000639603	SCNN1D	P51172	638 aa		10.11	□□□□□ -0.79
STRADA-238	ENST00000639603	BRPF1	P55201	1214 aa	Predicted RBP	10.11	□□□□□ -0.79
STRADA-238	ENST00000639603	GRM1	Q13255	1194 aa		10.11	□□□□□ -0.79
STRADA-238	ENST00000639603	CRY2	Q49AN0	593 aa		10.11	□□□□□ -0.79
STRADA-238	ENST00000639603	OLFM4	Q6UX06	510 aa		10.11	□□□□□ -0.79
STRADA-238	ENST00000639603	SNRPA1	P09661	255 aa	Known RBP	10.1	□□□□□ -0.79
STRADA-238	ENST00000639603	LARGE2	Q8N3Y3	721 aa		10.1	□□□□□ -0.79
STRADA-238	ENST00000639603	CFAP44	Q96MT7	982 aa		10.1	□□□□□ -0.79
STRADA-238	ENST00000639603	MCOLN1	Q9GZU1	580 aa		10.1	□□□□□ -0.79
STRADA-238	ENST00000639603	USP16	Q9Y5T5	823 aa		10.1	□□□□□ -0.79
STRADA-238	ENST00000639603	KIF7	Q2M1P5	1343 aa		10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	CDHR2	Q9BYE9	1310 aa		10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	U2SURP	O15042	1029 aa	Known RBP	10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	EPS15	P42566	896 aa		10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	CST9	Q5W186	159 aa		10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	SAPCD2	Q86UD0	394 aa		10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	NIM1K	Q8IY84	436 aa		10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	RPGR	Q92834	1020 aa	Known RBP	10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	VPS33B	Q9H267	617 aa		10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	ADARB2	Q9NS39	739 aa	Known RBP	10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	LRRC37A	A6NMS7	1700 aa		10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	ABCC12	Q96J65	1359 aa		10.09	□□□□□ -0.79
STRADA-238	ENST00000639603	PIP4K2A	P48426	406 aa	Predicted RBP	10.08	□□□□□ -0.8
STRADA-238	ENST00000639603	DGKZ	Q13574	1117 aa		10.08	□□□□□ -0.8
STRADA-238	ENST00000639603	TMX4	Q9H1E5	349 aa	Predicted RBP	10.08	□□□□□ -0.8
STRADA-238	ENST00000639603	GPRC5D	Q9NZD1	345 aa		10.08	□□□□□ -0.8
STRADA-238	ENST00000639603	TSKS	Q9UJT2	592 aa		10.08	□□□□□ -0.8
STRADA-238	ENST00000639603	NPC1L1	Q9UHC9	1359 aa		10.08	□□□□□ -0.8
STRADA-238	ENST00000639603	FAM177B	A6PVY3	158 aa		10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	TRAF5	O00463	557 aa		10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	PPEF1	O14829	653 aa	Predicted RBP	10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	KCNQ3	O43525	872 aa		10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	AOC2	O75106	756 aa		10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	CELF2	O95319	508 aa	Known RBP	10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	HOXA10	P31260	410 aa	Predicted RBP	10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	FMR1	Q06787	632 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	NOG	Q13253	232 aa		10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	RTF1	Q92541	710 aa	Known RBP	10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	PSME4	Q14997	1843 aa		10.07	□□□□□ -0.8
STRADA-238	ENST00000639603	ERVV-1	B6SEH8	477 aa		10.06	□□□□□ -0.8
STRADA-238	ENST00000639603	PPIP5K2	O43314	1243 aa		10.06	□□□□□ -0.8
STRADA-238	ENST00000639603	NUBP1	P53384	320 aa		10.06	□□□□□ -0.8
STRADA-238	ENST00000639603	SUPT20H	Q8NEM7	779 aa		10.06	□□□□□ -0.8
STRADA-238	ENST00000639603	ZC3H15	Q8WU90	426 aa	Known RBP	10.06	□□□□□ -0.8
STRADA-238	ENST00000639603	RBM17	Q96I25	401 aa	Known RBP	10.06	□□□□□ -0.8
STRADA-238	ENST00000639603	CRAMP1	Q96RY5	1269 aa		10.06	□□□□□ -0.8
STRADA-238	ENST00000639603	TAF1	P21675	1872 aa		10.06	□□□□□ -0.8
STRADA-238	ENST00000639603	PRAMEF22	A3QJZ6	481 aa		10.05	□□□□□ -0.8
STRADA-238	ENST00000639603	NBPF26	B4DH59	902 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms