RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 FMNL2Q96PY5 1086 aa22.8■■□□□ 1.24
CROCCP2-206ENST00000639594 PRDM11Q9NQV5 511 aa22.8■■□□□ 1.24
CROCCP2-206ENST00000639594 RUFY3Q7L099 469 aa22.8■■□□□ 1.24
CROCCP2-206ENST00000639594 GLI3P10071 1580 aa22.79■■□□□ 1.24
CROCCP2-206ENST00000639594 CASTP20810 708 aaKnown RBP22.79■■□□□ 1.24
CROCCP2-206ENST00000639594 NASPP49321 788 aaPredicted RBP22.79■■□□□ 1.24
CROCCP2-206ENST00000639594 CABP4P57796 275 aa22.79■■□□□ 1.24
CROCCP2-206ENST00000639594 PLEKHG2Q9H7P9 1386 aa22.79■■□□□ 1.24
CROCCP2-206ENST00000639594 PRPF40BQ6NWY9 871 aaKnown RBP22.79■■□□□ 1.24
CROCCP2-206ENST00000639594 AHDC1Q5TGY3 1603 aaPredicted RBP22.79■■□□□ 1.24
CROCCP2-206ENST00000639594 FAM227BQ96M60 508 aa22.78■■□□□ 1.24
CROCCP2-206ENST00000639594 LIMCH1Q9UPQ0 1083 aa22.78■■□□□ 1.24
CROCCP2-206ENST00000639594 PARP4Q9UKK3 1724 aaKnown RBP22.78■■□□□ 1.24
CROCCP2-206ENST00000639594 NMIQ13287 307 aaPredicted RBP22.77■■□□□ 1.24
CROCCP2-206ENST00000639594 ADCK5Q3MIX3 580 aa22.77■■□□□ 1.24
CROCCP2-206ENST00000639594 BOLA2Q9H3K6 86 aa22.77■■□□□ 1.24
CROCCP2-206ENST00000639594 TMEM63CQ9P1W3 806 aa22.77■■□□□ 1.24
CROCCP2-206ENST00000639594 RPAP1Q9BWH6 1393 aaPredicted RBP22.77■■□□□ 1.24
CROCCP2-206ENST00000639594 KCNB2Q92953 911 aa22.77■■□□□ 1.24
CROCCP2-206ENST00000639594 CCDC171Q6TFL3 1326 aa22.77■■□□□ 1.24
CROCCP2-206ENST00000639594 NECTIN1Q15223 517 aa22.76■■□□□ 1.23
CROCCP2-206ENST00000639594 FOXD4L6Q3SYB3 417 aaPredicted RBP22.76■■□□□ 1.23
CROCCP2-206ENST00000639594 FOXD4L3Q6VB84 417 aaPredicted RBP22.76■■□□□ 1.23
CROCCP2-206ENST00000639594 JAKMIP1Q96N16 626 aaKnown RBP22.76■■□□□ 1.23
CROCCP2-206ENST00000639594 WDR33Q9C0J8 1336 aaKnown RBP22.76■■□□□ 1.23
CROCCP2-206ENST00000639594 RFX5P48382 616 aaPredicted RBP22.75■■□□□ 1.23
CROCCP2-206ENST00000639594 ATP5J2-PTCD1G3V325 749 aa22.74■■□□□ 1.23
CROCCP2-206ENST00000639594 HIP1O00291 1037 aa22.74■■□□□ 1.23
CROCCP2-206ENST00000639594 PTCD1O75127 700 aaKnown RBP22.74■■□□□ 1.23
CROCCP2-206ENST00000639594 LARGE1O95461 756 aa22.74■■□□□ 1.23
CROCCP2-206ENST00000639594 PRIM1P49642 420 aaKnown RBP22.74■■□□□ 1.23
CROCCP2-206ENST00000639594 UBE3BQ7Z3V4 1068 aa22.74■■□□□ 1.23
CROCCP2-206ENST00000639594 RBM8AQ9Y5S9 174 aaKnown RBP22.74■■□□□ 1.23
CROCCP2-206ENST00000639594 COL5A2P05997 1499 aaPredicted RBP22.74■■□□□ 1.23
CROCCP2-206ENST00000639594 RBSNQ9H1K0 784 aa22.74■■□□□ 1.23
CROCCP2-206ENST00000639594 ZSWIM6Q9HCJ5 1215 aa22.74■■□□□ 1.23
CROCCP2-206ENST00000639594 COPRSQ9NQ92 184 aa22.74■■□□□ 1.23
CROCCP2-206ENST00000639594 MBD3O95983 291 aa22.73■■□□□ 1.23
CROCCP2-206ENST00000639594 TM6SF1Q9BZW5 370 aa22.73■■□□□ 1.23
CROCCP2-206ENST00000639594 PDRG1Q9NUG6 133 aa22.73■■□□□ 1.23
CROCCP2-206ENST00000639594 A0A0D9SFI3 127 aa22.73■■□□□ 1.23
CROCCP2-206ENST00000639594 PTPN12Q05209 780 aaKnown RBP22.73■■□□□ 1.23
CROCCP2-206ENST00000639594 MAP4K1Q92918 833 aa22.73■■□□□ 1.23
CROCCP2-206ENST00000639594 FSD1Q9BTV5 496 aa22.73■■□□□ 1.23
CROCCP2-206ENST00000639594 CCDC173Q0VFZ6 552 aa22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 VPS53Q5VIR6 699 aa22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 CREB3L3Q68CJ9 461 aa22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 DDX54Q8TDD1 881 aaKnown RBP22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 TRIM44Q96DX7 344 aaPredicted RBP22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 PPP1R9BQ96SB3 815 aa22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 PHLPP1O60346 1717 aa22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 ERBB4Q15303 1308 aa22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 A0A087WZG4 1122 aa22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 RABL6Q3YEC7 729 aaPredicted RBP22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 GDPD2Q9HCC8 539 aa22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 SNRKQ9NRH2 765 aa22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 CYP46A1Q9Y6A2 500 aa22.72■■□□□ 1.23
CROCCP2-206ENST00000639594 UBR2Q8IWV8 1755 aa22.71■■□□□ 1.23
CROCCP2-206ENST00000639594 SYCE3A1L190 88 aa22.71■■□□□ 1.23
CROCCP2-206ENST00000639594 PLBD2Q8NHP8 589 aa22.71■■□□□ 1.23
CROCCP2-206ENST00000639594 WDR17Q8IZU2 1322 aa22.7■■□□□ 1.23
CROCCP2-206ENST00000639594 CLCN1P35523 988 aa22.7■■□□□ 1.23
CROCCP2-206ENST00000639594 TFCP2Q12800 502 aa22.7■■□□□ 1.23
CROCCP2-206ENST00000639594 LRSAM1Q6UWE0 723 aa22.7■■□□□ 1.23
CROCCP2-206ENST00000639594 NUP188Q5SRE5 1749 aa22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 COL15A1P39059 1388 aa22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 ESPNB1AK53 854 aa22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 NBPF26B4DH59 902 aa22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 KCNJ4P48050 445 aa22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 CASP7P55210 303 aa22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 PIP4K2BP78356 416 aa22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 NBPF14Q5TI25 921 aa22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 NBPF10Q6P3W6 841 aaKnown RBP22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 NBPF15Q8N660 670 aa22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 EDC3Q96F86 508 aaKnown RBP22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 SMC3Q9UQE7 1217 aa22.7■■□□□ 1.22
CROCCP2-206ENST00000639594 COL16A1Q07092 1604 aaPredicted RBP22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 COL22A1Q8NFW1 1626 aaPredicted RBP22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 GADD45BO75293 160 aaPredicted RBP22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 ZKSCAN1P17029 563 aaPredicted RBP22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 TNNI3KQ59H18 835 aa22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 USP48Q86UV5 1035 aa22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 CCDC83Q8IWF9 413 aa22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 DBNLQ9UJU6 430 aaKnown RBP22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 FPGT-TNNI3KV9GXZ4 949 aa22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 SLC27A2O14975 620 aa22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 ZSCAN22P10073 491 aaPredicted RBP22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 SYT1P21579 422 aa22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 ZCRB1Q8TBF4 217 aaKnown RBP22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 ANO8Q9HCE9 1232 aaPredicted RBP22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.69■■□□□ 1.22
CROCCP2-206ENST00000639594 STX6O43752 255 aa22.68■■□□□ 1.22
CROCCP2-206ENST00000639594 ANP32BQ92688 251 aaKnown RBP22.68■■□□□ 1.22
CROCCP2-206ENST00000639594 STRN4Q9NRL3 753 aa22.68■■□□□ 1.22
CROCCP2-206ENST00000639594 MED23Q9ULK4 1368 aa22.68■■□□□ 1.22
CROCCP2-206ENST00000639594 DTNBO60941 627 aa22.67■■□□□ 1.22
CROCCP2-206ENST00000639594 TOM1L2Q6ZVM7 507 aa22.67■■□□□ 1.22
CROCCP2-206ENST00000639594 ZSCAN31Q96LW9 406 aaPredicted RBP22.67■■□□□ 1.22
CROCCP2-206ENST00000639594 PCDH11XQ9BZA7 1347 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms