RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 NLRP10Q86W26 655 aa18.92■□□□□ 0.62
SPIN3-219ENST00000639053 NUP98P52948 1817 aa18.92■□□□□ 0.62
SPIN3-219ENST00000639053 ANKRD36CQ5JPF3 1778 aa18.92■□□□□ 0.62
SPIN3-219ENST00000639053 ZNF34Q8IZ26 560 aa18.91■□□□□ 0.62
SPIN3-219ENST00000639053 BICC1Q9H694 974 aaKnown RBP18.91■□□□□ 0.62
SPIN3-219ENST00000639053 HDAC5Q9UQL6 1122 aa18.91■□□□□ 0.62
SPIN3-219ENST00000639053 HMMRO75330 724 aa18.91■□□□□ 0.62
SPIN3-219ENST00000639053 PHF14O94880 888 aa18.91■□□□□ 0.62
SPIN3-219ENST00000639053 EPHA10Q5JZY3 1008 aa18.91■□□□□ 0.62
SPIN3-219ENST00000639053 PPP1R42Q7Z4L9 355 aa18.91■□□□□ 0.62
SPIN3-219ENST00000639053 ARHGEF1Q92888 912 aaKnown RBP18.91■□□□□ 0.62
SPIN3-219ENST00000639053 SRP68Q9UHB9 627 aaKnown RBP18.91■□□□□ 0.62
SPIN3-219ENST00000639053 BCORQ6W2J9 1755 aa18.91■□□□□ 0.62
SPIN3-219ENST00000639053 NARFQ9UHQ1 456 aa18.9■□□□□ 0.62
SPIN3-219ENST00000639053 UBN2Q6ZU65 1347 aa18.9■□□□□ 0.62
SPIN3-219ENST00000639053 DCTPP1Q9H773 170 aa18.89■□□□□ 0.61
SPIN3-219ENST00000639053 BCL2L12Q9HB09 334 aa18.89■□□□□ 0.61
SPIN3-219ENST00000639053 SRGAP3O43295 1099 aa18.88■□□□□ 0.61
SPIN3-219ENST00000639053 MTX1Q13505 466 aa18.88■□□□□ 0.61
SPIN3-219ENST00000639053 TRAPPC3LQ5T215 181 aa18.88■□□□□ 0.61
SPIN3-219ENST00000639053 USPL1Q5W0Q7 1092 aa18.88■□□□□ 0.61
SPIN3-219ENST00000639053 SSH3Q8TE77 659 aa18.88■□□□□ 0.61
SPIN3-219ENST00000639053 GCC1Q96CN9 775 aa18.88■□□□□ 0.61
SPIN3-219ENST00000639053 ZNF652Q9Y2D9 606 aa18.88■□□□□ 0.61
SPIN3-219ENST00000639053 SCN7AQ01118 1682 aa18.88■□□□□ 0.61
SPIN3-219ENST00000639053 PCCAP05165 728 aaPredicted RBP18.88■□□□□ 0.61
SPIN3-219ENST00000639053 POLA2Q14181 598 aa18.88■□□□□ 0.61
SPIN3-219ENST00000639053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.87■□□□□ 0.61
SPIN3-219ENST00000639053 CLEC4GQ6UXB4 293 aa18.87■□□□□ 0.61
SPIN3-219ENST00000639053 FAM89AQ96GI7 184 aa18.87■□□□□ 0.61
SPIN3-219ENST00000639053 NIP7Q9Y221 180 aaKnown RBP eCLIP18.87■□□□□ 0.61
SPIN3-219ENST00000639053 UBR3Q6ZT12 1888 aa18.86■□□□□ 0.61
SPIN3-219ENST00000639053 RGPD3A6NKT7 1758 aaPredicted RBP18.86■□□□□ 0.61
SPIN3-219ENST00000639053 RGPD4Q7Z3J3 1758 aa18.86■□□□□ 0.61
SPIN3-219ENST00000639053 ZPR1O75312 459 aa18.86■□□□□ 0.61
SPIN3-219ENST00000639053 RFC4P35249 363 aa18.86■□□□□ 0.61
SPIN3-219ENST00000639053 FOXO4P98177 505 aa18.86■□□□□ 0.61
SPIN3-219ENST00000639053 EN1Q05925 392 aaPredicted RBP18.86■□□□□ 0.61
SPIN3-219ENST00000639053 ZNF827Q17R98 1081 aa18.86■□□□□ 0.61
SPIN3-219ENST00000639053 SYNE4Q8N205 404 aa18.86■□□□□ 0.61
SPIN3-219ENST00000639053 ZBTB38Q8NAP3 1195 aaPredicted RBP18.86■□□□□ 0.61
SPIN3-219ENST00000639053 C4AP0C0L4 1744 aa18.86■□□□□ 0.61
SPIN3-219ENST00000639053 USP42Q9H9J4 1324 aaKnown RBP18.86■□□□□ 0.61
SPIN3-219ENST00000639053 NUCB1Q02818 461 aa18.86■□□□□ 0.61
SPIN3-219ENST00000639053 EZH2Q15910 746 aaKnown RBP18.86■□□□□ 0.61
SPIN3-219ENST00000639053 SUSD4Q5VX71 490 aa18.86■□□□□ 0.61
SPIN3-219ENST00000639053 TRMT112Q9UI30 125 aaKnown RBP18.86■□□□□ 0.61
SPIN3-219ENST00000639053 FAM177BA6PVY3 158 aa18.85■□□□□ 0.61
SPIN3-219ENST00000639053 RGL2O15211 777 aa18.85■□□□□ 0.61
SPIN3-219ENST00000639053 ADRA2BP18089 450 aa18.85■□□□□ 0.61
SPIN3-219ENST00000639053 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
SPIN3-219ENST00000639053 RABL6Q3YEC7 729 aaPredicted RBP18.85■□□□□ 0.61
SPIN3-219ENST00000639053 ANKRD45Q5TZF3 282 aa18.85■□□□□ 0.61
SPIN3-219ENST00000639053 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
SPIN3-219ENST00000639053 CAMKK2Q96RR4 588 aa18.85■□□□□ 0.61
SPIN3-219ENST00000639053 EXOC6BQ9Y2D4 811 aa18.85■□□□□ 0.61
SPIN3-219ENST00000639053 SSFA2P28290 1259 aa18.84■□□□□ 0.61
SPIN3-219ENST00000639053 PARP10Q53GL7 1025 aa18.84■□□□□ 0.61
SPIN3-219ENST00000639053 TBC1D9BQ66K14 1250 aa18.84■□□□□ 0.61
SPIN3-219ENST00000639053 APBB1O00213 710 aa18.83■□□□□ 0.61
SPIN3-219ENST00000639053 BICDL1Q6ZP65 573 aa18.83■□□□□ 0.61
SPIN3-219ENST00000639053 CDHR2Q9BYE9 1310 aa18.83■□□□□ 0.6
SPIN3-219ENST00000639053 SF3B2Q13435 895 aaKnown RBP18.83■□□□□ 0.6
SPIN3-219ENST00000639053 LMBR1LQ6UX01 489 aa18.83■□□□□ 0.6
SPIN3-219ENST00000639053 CHD1LQ86WJ1 897 aa18.83■□□□□ 0.6
SPIN3-219ENST00000639053 UTP14AQ9BVJ6 771 aaKnown RBP18.83■□□□□ 0.6
SPIN3-219ENST00000639053 LNPKQ9C0E8 428 aa18.83■□□□□ 0.6
SPIN3-219ENST00000639053 PA2G4Q9UQ80 394 aaKnown RBP18.82■□□□□ 0.6
SPIN3-219ENST00000639053 SURF6O75683 361 aaKnown RBP18.81■□□□□ 0.6
SPIN3-219ENST00000639053 NTSR2O95665 410 aa18.81■□□□□ 0.6
SPIN3-219ENST00000639053 TFCP2L1Q9NZI6 479 aa18.81■□□□□ 0.6
SPIN3-219ENST00000639053 IRS4O14654 1257 aaPredicted RBP18.81■□□□□ 0.6
SPIN3-219ENST00000639053 SMARCA5O60264 1052 aaPredicted RBP18.81■□□□□ 0.6
SPIN3-219ENST00000639053 BAG6P46379 1132 aa18.81■□□□□ 0.6
SPIN3-219ENST00000639053 DEFB132Q7Z7B7 95 aa18.81■□□□□ 0.6
SPIN3-219ENST00000639053 PLA2G12BQ9BX93 195 aa18.81■□□□□ 0.6
SPIN3-219ENST00000639053 CHMP3Q9Y3E7 222 aa18.8■□□□□ 0.6
SPIN3-219ENST00000639053 SH3TC1Q8TE82 1336 aa18.79■□□□□ 0.6
SPIN3-219ENST00000639053 RFX5P48382 616 aaPredicted RBP18.79■□□□□ 0.6
SPIN3-219ENST00000639053 NUTM1Q86Y26 1132 aa18.79■□□□□ 0.6
SPIN3-219ENST00000639053 KLHDC4Q8TBB5 520 aa18.79■□□□□ 0.6
SPIN3-219ENST00000639053 SETDB2Q96T68 719 aa18.79■□□□□ 0.6
SPIN3-219ENST00000639053 BCL11AQ9H165 835 aa18.79■□□□□ 0.6
SPIN3-219ENST00000639053 HCLS1P14317 486 aaPredicted RBP18.78■□□□□ 0.6
SPIN3-219ENST00000639053 GYS1P13807 737 aa18.78■□□□□ 0.6
SPIN3-219ENST00000639053 UPF2Q9HAU5 1272 aaKnown RBP18.78■□□□□ 0.6
SPIN3-219ENST00000639053 ANO8Q9HCE9 1232 aaPredicted RBP18.78■□□□□ 0.6
SPIN3-219ENST00000639053 TUBGCP6Q96RT7 1819 aa18.77■□□□□ 0.6
SPIN3-219ENST00000639053 PDE8AO60658 829 aa18.77■□□□□ 0.6
SPIN3-219ENST00000639053 CSF1RP07333 972 aa18.77■□□□□ 0.6
SPIN3-219ENST00000639053 COL23A1Q86Y22 540 aaPredicted RBP18.77■□□□□ 0.6
SPIN3-219ENST00000639053 CCDC85AQ96PX6 553 aaPredicted RBP18.77■□□□□ 0.6
SPIN3-219ENST00000639053 RAB11FIP3O75154 756 aa18.76■□□□□ 0.59
SPIN3-219ENST00000639053 CTSWP56202 376 aa18.76■□□□□ 0.59
SPIN3-219ENST00000639053 PTPN12Q05209 780 aaKnown RBP18.76■□□□□ 0.59
SPIN3-219ENST00000639053 NFIXQ14938 502 aa18.76■□□□□ 0.59
SPIN3-219ENST00000639053 ERFEQ4G0M1 354 aa18.76■□□□□ 0.59
SPIN3-219ENST00000639053 LRRCC1Q9C099 1032 aa18.76■□□□□ 0.59
SPIN3-219ENST00000639053 COL24A1Q17RW2 1714 aa18.76■□□□□ 0.59
SPIN3-219ENST00000639053 OS9Q13438 667 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms