RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 PDE6BP35913 854 aa11.32□□□□□ -0.6
NECAP1-212ENST00000638787 TRIM28Q13263 835 aaKnown RBP11.32□□□□□ -0.6
NECAP1-212ENST00000638787 ERFEQ4G0M1 354 aa11.32□□□□□ -0.6
NECAP1-212ENST00000638787 BCL2L13Q9BXK5 485 aa11.32□□□□□ -0.6
NECAP1-212ENST00000638787 COL11A2P13942 1736 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-212ENST00000638787 DLEC1Q9Y238 1755 aa11.32□□□□□ -0.6
NECAP1-212ENST00000638787 KCNA3P22001 575 aa11.31□□□□□ -0.6
NECAP1-212ENST00000638787 C2CD5Q86YS7 1000 aa11.31□□□□□ -0.6
NECAP1-212ENST00000638787 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
NECAP1-212ENST00000638787 SMC4Q9NTJ3 1288 aa11.31□□□□□ -0.6
NECAP1-212ENST00000638787 TRMT112Q9UI30 125 aaKnown RBP11.31□□□□□ -0.6
NECAP1-212ENST00000638787 WWC3Q9ULE0 1092 aa11.31□□□□□ -0.6
NECAP1-212ENST00000638787 RNF123Q5XPI4 1314 aa11.31□□□□□ -0.6
NECAP1-212ENST00000638787 TNRC6CQ9HCJ0 1690 aaKnown RBP11.31□□□□□ -0.6
NECAP1-212ENST00000638787 RIC1Q4ADV7 1423 aa11.31□□□□□ -0.6
NECAP1-212ENST00000638787 DNAAF4Q8WXU2 420 aa11.31□□□□□ -0.6
NECAP1-212ENST00000638787 H0YIN7 160 aa11.3□□□□□ -0.6
NECAP1-212ENST00000638787 NEXNQ0ZGT2 675 aa11.3□□□□□ -0.6
NECAP1-212ENST00000638787 GPR162Q16538 588 aa11.3□□□□□ -0.6
NECAP1-212ENST00000638787 CCDC191Q8NCU4 936 aa11.3□□□□□ -0.6
NECAP1-212ENST00000638787 PDZRN3Q9UPQ7 1066 aa11.3□□□□□ -0.6
NECAP1-212ENST00000638787 DCAF8L1A6NGE4 600 aa11.29□□□□□ -0.6
NECAP1-212ENST00000638787 F6X3S4 739 aa11.29□□□□□ -0.6
NECAP1-212ENST00000638787 IGKV5-2P06315 115 aa11.29□□□□□ -0.6
NECAP1-212ENST00000638787 RARSP54136 660 aaKnown RBP11.29□□□□□ -0.6
NECAP1-212ENST00000638787 CWC25Q9NXE8 425 aaPredicted RBP11.29□□□□□ -0.6
NECAP1-212ENST00000638787 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
NECAP1-212ENST00000638787 SH3TC1Q8TE82 1336 aa11.29□□□□□ -0.6
NECAP1-212ENST00000638787 KLRG2A4D1S0 409 aaPredicted RBP11.29□□□□□ -0.6
NECAP1-212ENST00000638787 YBX3P16989 372 aaKnown RBP eCLIP11.29□□□□□ -0.6
NECAP1-212ENST00000638787 SYNE4Q8N205 404 aa11.29□□□□□ -0.6
NECAP1-212ENST00000638787 PTPRCP08575 1304 aa11.28□□□□□ -0.6
NECAP1-212ENST00000638787 SRGNP10124 158 aa11.28□□□□□ -0.6
NECAP1-212ENST00000638787 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
NECAP1-212ENST00000638787 SLC10A5Q5PT55 438 aa11.28□□□□□ -0.6
NECAP1-212ENST00000638787 FAM89AQ96GI7 184 aa11.28□□□□□ -0.6
NECAP1-212ENST00000638787 YTHDC1Q96MU7 727 aaKnown RBP11.28□□□□□ -0.6
NECAP1-212ENST00000638787 DDX60Q8IY21 1712 aaKnown RBP11.28□□□□□ -0.6
NECAP1-212ENST00000638787 NEURL1BA8MQ27 555 aa11.28□□□□□ -0.6
NECAP1-212ENST00000638787 HCLS1P14317 486 aaPredicted RBP11.28□□□□□ -0.6
NECAP1-212ENST00000638787 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
NECAP1-212ENST00000638787 ZBTB38Q8NAP3 1195 aaPredicted RBP11.28□□□□□ -0.6
NECAP1-212ENST00000638787 LINS1Q8NG48 757 aa11.28□□□□□ -0.6
NECAP1-212ENST00000638787 ZNF622Q969S3 477 aaKnown RBP eCLIP11.28□□□□□ -0.6
NECAP1-212ENST00000638787 BCS1LQ9Y276 419 aa11.28□□□□□ -0.6
NECAP1-212ENST00000638787 ARFGEF1Q9Y6D6 1849 aa11.27□□□□□ -0.6
NECAP1-212ENST00000638787 LAMB2P55268 1798 aa11.27□□□□□ -0.6
NECAP1-212ENST00000638787 PCCAP05165 728 aaPredicted RBP11.27□□□□□ -0.61
NECAP1-212ENST00000638787 NPR1P16066 1061 aa11.27□□□□□ -0.61
NECAP1-212ENST00000638787 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
NECAP1-212ENST00000638787 CRY2Q49AN0 593 aa11.27□□□□□ -0.61
NECAP1-212ENST00000638787 DALRD3Q5D0E6 543 aaKnown RBP11.27□□□□□ -0.61
NECAP1-212ENST00000638787 STYK1Q6J9G0 422 aa11.27□□□□□ -0.61
NECAP1-212ENST00000638787 C3orf67Q6ZVT6 689 aa11.27□□□□□ -0.61
NECAP1-212ENST00000638787 MASTLQ96GX5 879 aa11.27□□□□□ -0.61
NECAP1-212ENST00000638787 CACNA1SQ13698 1873 aa11.26□□□□□ -0.61
NECAP1-212ENST00000638787 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
NECAP1-212ENST00000638787 SLC4A10Q6U841 1118 aa11.26□□□□□ -0.61
NECAP1-212ENST00000638787 TTLL6Q8N841 843 aa11.26□□□□□ -0.61
NECAP1-212ENST00000638787 NLRP3Q96P20 1036 aa11.26□□□□□ -0.61
NECAP1-212ENST00000638787 NOB1Q9ULX3 412 aaKnown RBP11.26□□□□□ -0.61
NECAP1-212ENST00000638787 KIF16BQ96L93 1317 aa11.26□□□□□ -0.61
NECAP1-212ENST00000638787 IRS4O14654 1257 aaPredicted RBP11.26□□□□□ -0.61
NECAP1-212ENST00000638787 GCKRQ14397 625 aa11.26□□□□□ -0.61
NECAP1-212ENST00000638787 JARID2Q92833 1246 aaPredicted RBP11.26□□□□□ -0.61
NECAP1-212ENST00000638787 GRIN3BO60391 1043 aa11.25□□□□□ -0.61
NECAP1-212ENST00000638787 BCAR3O75815 825 aa11.25□□□□□ -0.61
NECAP1-212ENST00000638787 RPGRQ92834 1020 aaKnown RBP11.25□□□□□ -0.61
NECAP1-212ENST00000638787 CNKSR1Q969H4 720 aa11.25□□□□□ -0.61
NECAP1-212ENST00000638787 SLX4Q8IY92 1834 aa11.25□□□□□ -0.61
NECAP1-212ENST00000638787 SRCIN1Q9C0H9 1055 aa11.24□□□□□ -0.61
NECAP1-212ENST00000638787 CDHR2Q9BYE9 1310 aa11.24□□□□□ -0.61
NECAP1-212ENST00000638787 H7C1W4 665 aa11.24□□□□□ -0.61
NECAP1-212ENST00000638787 ALDH1L1O75891 902 aa11.24□□□□□ -0.61
NECAP1-212ENST00000638787 HSP90B1P14625 803 aaKnown RBP11.24□□□□□ -0.61
NECAP1-212ENST00000638787 HOXA10P31260 410 aaPredicted RBP11.24□□□□□ -0.61
NECAP1-212ENST00000638787 PRPF40BQ6NWY9 871 aaKnown RBP11.24□□□□□ -0.61
NECAP1-212ENST00000638787 UBE3BQ7Z3V4 1068 aa11.24□□□□□ -0.61
NECAP1-212ENST00000638787 API5Q9BZZ5 524 aaKnown RBP11.24□□□□□ -0.61
NECAP1-212ENST00000638787 GOLGB1Q14789 3259 aaKnown RBP11.24□□□□□ -0.61
NECAP1-212ENST00000638787 RBM17Q96I25 401 aaKnown RBP11.23□□□□□ -0.61
NECAP1-212ENST00000638787 MYH3P11055 1940 aa11.23□□□□□ -0.61
NECAP1-212ENST00000638787 PDE8AO60658 829 aa11.23□□□□□ -0.61
NECAP1-212ENST00000638787 ALDH1B1P30837 517 aa11.23□□□□□ -0.61
NECAP1-212ENST00000638787 ARHGAP45Q92619 1136 aa11.23□□□□□ -0.61
NECAP1-212ENST00000638787 FRAT1Q92837 279 aaPredicted RBP11.23□□□□□ -0.61
NECAP1-212ENST00000638787 CRAMP1Q96RY5 1269 aa11.23□□□□□ -0.61
NECAP1-212ENST00000638787 ZNF219Q9P2Y4 722 aaPredicted RBP11.23□□□□□ -0.61
NECAP1-212ENST00000638787 IPO8O15397 1037 aaKnown RBP11.22□□□□□ -0.61
NECAP1-212ENST00000638787 CASP7P55210 303 aa11.22□□□□□ -0.61
NECAP1-212ENST00000638787 SF3B3Q15393 1217 aaKnown RBP11.22□□□□□ -0.61
NECAP1-212ENST00000638787 ABCC4O15439 1325 aa11.22□□□□□ -0.61
NECAP1-212ENST00000638787 CHD4Q14839 1912 aa11.22□□□□□ -0.61
NECAP1-212ENST00000638787 GRM8O00222 908 aa11.21□□□□□ -0.61
NECAP1-212ENST00000638787 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
NECAP1-212ENST00000638787 C9orf78Q9NZ63 289 aaPredicted RBP11.21□□□□□ -0.61
NECAP1-212ENST00000638787 TAF1P21675 1872 aa11.21□□□□□ -0.61
NECAP1-212ENST00000638787 C21orf2O43822 256 aa11.21□□□□□ -0.62
NECAP1-212ENST00000638787 ARHGAP27Q6ZUM4 889 aa11.21□□□□□ -0.62
NECAP1-212ENST00000638787 C7orf43Q8WVR3 580 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms