RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 AKAP12Q02952 1782 aa8.77□□□□□ -1.01
SCARB2-206ENST00000638175 MCCD1P59942 119 aaPredicted RBP8.77□□□□□ -1.01
SCARB2-206ENST00000638175 NBPF1Q3BBV0 1214 aa8.77□□□□□ -1.01
SCARB2-206ENST00000638175 FOXJ1Q92949 421 aa8.77□□□□□ -1.01
SCARB2-206ENST00000638175 ARHGAP9Q9BRR9 750 aa8.77□□□□□ -1.01
SCARB2-206ENST00000638175 POGKQ9P215 609 aa8.77□□□□□ -1.01
SCARB2-206ENST00000638175 SHPRHQ149N8 1683 aa8.77□□□□□ -1.01
SCARB2-206ENST00000638175 CENPJQ9HC77 1338 aaPredicted RBP8.77□□□□□ -1.01
SCARB2-206ENST00000638175 C1orf167Q5SNV9 1468 aa8.77□□□□□ -1.01
SCARB2-206ENST00000638175 WAPLQ7Z5K2 1190 aa8.76□□□□□ -1.01
SCARB2-206ENST00000638175 MPNDQ8N594 471 aa8.76□□□□□ -1.01
SCARB2-206ENST00000638175 CARD11Q9BXL7 1154 aa8.76□□□□□ -1.01
SCARB2-206ENST00000638175 ATP7BP35670 1465 aa8.76□□□□□ -1.01
SCARB2-206ENST00000638175 WIPF1O43516 503 aa8.75□□□□□ -1.01
SCARB2-206ENST00000638175 ADAM32Q8TC27 787 aa8.75□□□□□ -1.01
SCARB2-206ENST00000638175 C1QTNF2Q9BXJ5 285 aa8.75□□□□□ -1.01
SCARB2-206ENST00000638175 PPP1R12CQ9BZL4 782 aa8.75□□□□□ -1.01
SCARB2-206ENST00000638175 SLAIN2Q9P270 581 aa8.75□□□□□ -1.01
SCARB2-206ENST00000638175 MON2Q7Z3U7 1717 aa8.74□□□□□ -1.01
SCARB2-206ENST00000638175 NNTQ13423 1086 aa8.74□□□□□ -1.01
SCARB2-206ENST00000638175 BPHLQ86WA6 291 aaPredicted RBP8.74□□□□□ -1.01
SCARB2-206ENST00000638175 NFATC2IPQ8NCF5 419 aa8.74□□□□□ -1.01
SCARB2-206ENST00000638175 TRPM3Q9HCF6 1732 aaPredicted RBP8.74□□□□□ -1.01
SCARB2-206ENST00000638175 MARF1Q9Y4F3 1742 aaKnown RBP8.74□□□□□ -1.01
SCARB2-206ENST00000638175 USP47Q96K76 1375 aa8.73□□□□□ -1.01
SCARB2-206ENST00000638175 COL22A1Q8NFW1 1626 aaPredicted RBP8.73□□□□□ -1.01
SCARB2-206ENST00000638175 PIP4K2BP78356 416 aa8.73□□□□□ -1.01
SCARB2-206ENST00000638175 SAFB2Q14151 953 aaKnown RBP eCLIP8.73□□□□□ -1.01
SCARB2-206ENST00000638175 C4orf48Q5BLP8 95 aa8.73□□□□□ -1.01
SCARB2-206ENST00000638175 FAM174AQ8TBP5 190 aa8.73□□□□□ -1.01
SCARB2-206ENST00000638175 ABCA3Q99758 1704 aa8.73□□□□□ -1.01
SCARB2-206ENST00000638175 MYOM1P52179 1685 aa8.72□□□□□ -1.01
SCARB2-206ENST00000638175 ALS2Q96Q42 1657 aa8.72□□□□□ -1.01
SCARB2-206ENST00000638175 PALM3A6NDB9 673 aaPredicted RBP8.72□□□□□ -1.01
SCARB2-206ENST00000638175 SRPK2P78362 688 aaKnown RBP8.72□□□□□ -1.01
SCARB2-206ENST00000638175 ERFEQ4G0M1 354 aa8.72□□□□□ -1.01
SCARB2-206ENST00000638175 ZBTB33Q86T24 672 aa8.72□□□□□ -1.01
SCARB2-206ENST00000638175 TRMT44Q8IYL2 757 aaKnown RBP8.72□□□□□ -1.01
SCARB2-206ENST00000638175 ZFP42Q96MM3 310 aa8.72□□□□□ -1.01
SCARB2-206ENST00000638175 CDK15Q96Q40 435 aa8.72□□□□□ -1.01
SCARB2-206ENST00000638175 KLF16Q9BXK1 252 aaPredicted RBP8.72□□□□□ -1.01
SCARB2-206ENST00000638175 NRKQ7Z2Y5 1582 aa8.72□□□□□ -1.01
SCARB2-206ENST00000638175 WASLO00401 505 aaPredicted RBP8.71□□□□□ -1.02
SCARB2-206ENST00000638175 ATP9BO43861 1147 aa8.71□□□□□ -1.02
SCARB2-206ENST00000638175 TIMP2P16035 220 aa8.71□□□□□ -1.02
SCARB2-206ENST00000638175 BRINP3Q76B58 766 aa8.71□□□□□ -1.02
SCARB2-206ENST00000638175 CEP126Q9P2H0 1117 aa8.71□□□□□ -1.02
SCARB2-206ENST00000638175 CRYBG1Q9Y4K1 1723 aa8.71□□□□□ -1.02
SCARB2-206ENST00000638175 PXDNQ92626 1479 aa8.7□□□□□ -1.02
SCARB2-206ENST00000638175 ADH1CP00326 375 aa8.7□□□□□ -1.02
SCARB2-206ENST00000638175 WDR4P57081 412 aaKnown RBP8.7□□□□□ -1.02
SCARB2-206ENST00000638175 ARID5BQ14865 1188 aa8.7□□□□□ -1.02
SCARB2-206ENST00000638175 PHTF2Q8N3S3 785 aa8.7□□□□□ -1.02
SCARB2-206ENST00000638175 HIRIP3Q9BW71 556 aaPredicted RBP8.7□□□□□ -1.02
SCARB2-206ENST00000638175 NXF1Q9UBU9 619 aaKnown RBP8.7□□□□□ -1.02
SCARB2-206ENST00000638175 PCDHB9Q9Y5E1 797 aa8.7□□□□□ -1.02
SCARB2-206ENST00000638175 MAFBQ9Y5Q3 323 aaPredicted RBP8.7□□□□□ -1.02
SCARB2-206ENST00000638175 EVC2Q86UK5 1308 aa8.7□□□□□ -1.02
SCARB2-206ENST00000638175 USP54Q70EL1 1684 aa8.69□□□□□ -1.02
SCARB2-206ENST00000638175 TBC1D9Q6ZT07 1266 aa8.69□□□□□ -1.02
SCARB2-206ENST00000638175 PBXIP1Q96AQ6 731 aa8.69□□□□□ -1.02
SCARB2-206ENST00000638175 TFIP11Q9UBB9 837 aaKnown RBP8.69□□□□□ -1.02
SCARB2-206ENST00000638175 NPHP3Q7Z494 1330 aa8.69□□□□□ -1.02
SCARB2-206ENST00000638175 ATAD2Q6PL18 1390 aa8.69□□□□□ -1.02
SCARB2-206ENST00000638175 KIF20BQ96Q89 1820 aa8.68□□□□□ -1.02
SCARB2-206ENST00000638175 MAGEB6P1A0A0J9YX57 407 aa8.68□□□□□ -1.02
SCARB2-206ENST00000638175 PIK3CDO00329 1044 aa8.68□□□□□ -1.02
SCARB2-206ENST00000638175 NR3C2P08235 984 aa8.68□□□□□ -1.02
SCARB2-206ENST00000638175 GRM5P41594 1212 aa8.68□□□□□ -1.02
SCARB2-206ENST00000638175 VEGFBP49765 207 aa8.68□□□□□ -1.02
SCARB2-206ENST00000638175 ESCO1Q5FWF5 840 aa8.68□□□□□ -1.02
SCARB2-206ENST00000638175 MRPL14Q6P1L8 145 aaKnown RBP8.68□□□□□ -1.02
SCARB2-206ENST00000638175 PLEKHM2Q8IWE5 1019 aa8.68□□□□□ -1.02
SCARB2-206ENST00000638175 CARD14Q9BXL6 1004 aa8.68□□□□□ -1.02
SCARB2-206ENST00000638175 NINLQ9Y2I6 1382 aa8.68□□□□□ -1.02
SCARB2-206ENST00000638175 MED1Q15648 1581 aaPredicted RBP8.68□□□□□ -1.02
SCARB2-206ENST00000638175 PHRF1Q9P1Y6 1649 aaKnown RBP8.68□□□□□ -1.02
SCARB2-206ENST00000638175 ST20-MTHFSA0A0A6YYL1 179 aa8.67□□□□□ -1.02
SCARB2-206ENST00000638175 POLR3AO14802 1390 aaPredicted RBP8.67□□□□□ -1.02
SCARB2-206ENST00000638175 AGERQ15109 404 aa8.67□□□□□ -1.02
SCARB2-206ENST00000638175 PPIP5K1Q6PFW1 1433 aa8.67□□□□□ -1.02
SCARB2-206ENST00000638175 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
SCARB2-206ENST00000638175 PUS7Q96PZ0 661 aaKnown RBP8.67□□□□□ -1.02
SCARB2-206ENST00000638175 ORAI2Q96SN7 254 aa8.67□□□□□ -1.02
SCARB2-206ENST00000638175 CDK19Q9BWU1 502 aa8.67□□□□□ -1.02
SCARB2-206ENST00000638175 PRR36Q9H6K5 1346 aa8.67□□□□□ -1.02
SCARB2-206ENST00000638175 ZFAND3Q9H8U3 227 aa8.67□□□□□ -1.02
SCARB2-206ENST00000638175 CDV3Q9UKY7 258 aaKnown RBP8.67□□□□□ -1.02
SCARB2-206ENST00000638175 ANKRD26Q9UPS8 1709 aa8.66□□□□□ -1.02
SCARB2-206ENST00000638175 BRD4O60885 1362 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-206ENST00000638175 JCADQ9P266 1359 aa8.66□□□□□ -1.02
SCARB2-206ENST00000638175 SOS2Q07890 1332 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-206ENST00000638175 ESPNB1AK53 854 aa8.66□□□□□ -1.02
SCARB2-206ENST00000638175 HSPA1LP34931 641 aa8.66□□□□□ -1.02
SCARB2-206ENST00000638175 INSM1Q01101 510 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-206ENST00000638175 NUDT16Q96DE0 195 aaKnown RBP8.66□□□□□ -1.02
SCARB2-206ENST00000638175 SLC10A4Q96EP9 437 aa8.66□□□□□ -1.02
SCARB2-206ENST00000638175 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
SCARB2-206ENST00000638175 TESK2Q96S53 571 aa8.66□□□□□ -1.02
SCARB2-206ENST00000638175 MAP4K5Q9Y4K4 846 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms