RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	UTP14A	Q9BVJ6	771 aa	Known RBP	28.37	■■■□□ 2.13
CHRNA7-231	ENST00000637786	NTSR2	O95665	410 aa		28.36	■■■□□ 2.13
CHRNA7-231	ENST00000637786	CWF19L2	Q2TBE0	894 aa	Known RBP	28.36	■■■□□ 2.13
CHRNA7-231	ENST00000637786	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	28.36	■■■□□ 2.13
CHRNA7-231	ENST00000637786	CNBD1	Q8NA66	436 aa		28.36	■■■□□ 2.13
CHRNA7-231	ENST00000637786	SRCIN1	Q9C0H9	1055 aa		28.36	■■■□□ 2.13
CHRNA7-231	ENST00000637786	KIF13B	Q9NQT8	1826 aa		28.35	■■■□□ 2.13
CHRNA7-231	ENST00000637786	CCT4	P50991	539 aa	Known RBP	28.35	■■■□□ 2.13
CHRNA7-231	ENST00000637786	MS4A1	P11836	297 aa		28.34	■■■□□ 2.13
CHRNA7-231	ENST00000637786	PRR5L	Q6MZQ0	368 aa		28.34	■■■□□ 2.13
CHRNA7-231	ENST00000637786	C10orf71	Q711Q0	1435 aa		28.34	■■■□□ 2.13
CHRNA7-231	ENST00000637786	GCKR	Q14397	625 aa		28.33	■■■□□ 2.13
CHRNA7-231	ENST00000637786	TRMT112	Q9UI30	125 aa	Known RBP	28.33	■■■□□ 2.13
CHRNA7-231	ENST00000637786	RIC1	Q4ADV7	1423 aa		28.33	■■■□□ 2.13
CHRNA7-231	ENST00000637786	NPHP1	O15259	732 aa		28.32	■■■□□ 2.12
CHRNA7-231	ENST00000637786	ST5	P78524	1137 aa		28.32	■■■□□ 2.12
CHRNA7-231	ENST00000637786	INTS3	Q68E01	1043 aa	Known RBP	28.32	■■■□□ 2.12
CHRNA7-231	ENST00000637786	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	28.32	■■■□□ 2.12
CHRNA7-231	ENST00000637786	SH3TC1	Q8TE82	1336 aa		28.32	■■■□□ 2.12
CHRNA7-231	ENST00000637786	FAM177B	A6PVY3	158 aa		28.31	■■■□□ 2.12
CHRNA7-231	ENST00000637786	PCCA	P05165	728 aa	Predicted RBP	28.31	■■■□□ 2.12
CHRNA7-231	ENST00000637786	GTF2E1	P29083	439 aa	Predicted RBP	28.31	■■■□□ 2.12
CHRNA7-231	ENST00000637786	DZIP1L	Q8IYY4	767 aa	Known RBP	28.31	■■■□□ 2.12
CHRNA7-231	ENST00000637786	FTSJ3	Q8IY81	847 aa	Known RBP	28.3	■■■□□ 2.12
CHRNA7-231	ENST00000637786	SLC10A5	Q5PT55	438 aa		28.29	■■■□□ 2.12
CHRNA7-231	ENST00000637786	CLUAP1	Q96AJ1	413 aa		28.29	■■■□□ 2.12
CHRNA7-231	ENST00000637786	TNN	Q9UQP3	1299 aa		28.29	■■■□□ 2.12
CHRNA7-231	ENST00000637786	CD2AP	Q9Y5K6	639 aa		28.29	■■■□□ 2.12
CHRNA7-231	ENST00000637786	ANKRD31	Q8N7Z5	1873 aa		28.29	■■■□□ 2.12
CHRNA7-231	ENST00000637786	LAMB2	P55268	1798 aa		28.29	■■■□□ 2.12
CHRNA7-231	ENST00000637786		H7C1W4	665 aa		28.28	■■■□□ 2.12
CHRNA7-231	ENST00000637786	ERFE	Q4G0M1	354 aa		28.28	■■■□□ 2.12
CHRNA7-231	ENST00000637786	NUTM1	Q86Y26	1132 aa		28.28	■■■□□ 2.12
CHRNA7-231	ENST00000637786	BRIP1	Q9BX63	1249 aa		28.28	■■■□□ 2.12
CHRNA7-231	ENST00000637786	PPP1R1B	Q9UD71	204 aa	Predicted RBP	28.28	■■■□□ 2.12
CHRNA7-231	ENST00000637786	ABCC12	Q96J65	1359 aa		28.27	■■■□□ 2.12
CHRNA7-231	ENST00000637786	CDHR2	Q9BYE9	1310 aa		28.27	■■■□□ 2.12
CHRNA7-231	ENST00000637786	HSP90B1	P14625	803 aa	Known RBP	28.27	■■■□□ 2.12
CHRNA7-231	ENST00000637786	PDE3A	Q14432	1141 aa		28.27	■■■□□ 2.12
CHRNA7-231	ENST00000637786	FAM89A	Q96GI7	184 aa		28.27	■■■□□ 2.12
CHRNA7-231	ENST00000637786	GRM8	O00222	908 aa		28.26	■■■□□ 2.11
CHRNA7-231	ENST00000637786	PLIN1	O60240	522 aa		28.26	■■■□□ 2.11
CHRNA7-231	ENST00000637786	RRP1	P56182	461 aa	Known RBP	28.26	■■■□□ 2.11
CHRNA7-231	ENST00000637786	DDX60	Q8IY21	1712 aa	Known RBP	28.26	■■■□□ 2.11
CHRNA7-231	ENST00000637786	UTY	O14607	1347 aa		28.25	■■■□□ 2.11
CHRNA7-231	ENST00000637786	RLBP1	P12271	317 aa		28.25	■■■□□ 2.11
CHRNA7-231	ENST00000637786	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.25	■■■□□ 2.11
CHRNA7-231	ENST00000637786	PDZRN3	Q9UPQ7	1066 aa		28.25	■■■□□ 2.11
CHRNA7-231	ENST00000637786	PDE6B	P35913	854 aa		28.24	■■■□□ 2.11
CHRNA7-231	ENST00000637786	CASP7	P55210	303 aa		28.24	■■■□□ 2.11
CHRNA7-231	ENST00000637786	UBE3B	Q7Z3V4	1068 aa		28.24	■■■□□ 2.11
CHRNA7-231	ENST00000637786	TMEM57	Q8N5G2	664 aa		28.24	■■■□□ 2.11
CHRNA7-231	ENST00000637786	KLRG2	A4D1S0	409 aa	Predicted RBP	28.23	■■■□□ 2.11
CHRNA7-231	ENST00000637786	IRS4	O14654	1257 aa	Predicted RBP	28.23	■■■□□ 2.11
CHRNA7-231	ENST00000637786	SYNE4	Q8N205	404 aa		28.23	■■■□□ 2.11
CHRNA7-231	ENST00000637786	USP44	Q9H0E7	712 aa		28.23	■■■□□ 2.11
CHRNA7-231	ENST00000637786	MYH3	P11055	1940 aa		28.22	■■■□□ 2.11
CHRNA7-231	ENST00000637786	TGFB2	P61812	414 aa		28.22	■■■□□ 2.11
CHRNA7-231	ENST00000637786	CCDC24	Q8N4L8	307 aa		28.22	■■■□□ 2.11
CHRNA7-231	ENST00000637786	TNRC6C	Q9HCJ0	1690 aa	Known RBP	28.22	■■■□□ 2.11
CHRNA7-231	ENST00000637786	KIAA1551	Q9HCM1	1747 aa		28.21	■■■□□ 2.11
CHRNA7-231	ENST00000637786	CENPB	P07199	599 aa	Predicted RBP	28.21	■■■□□ 2.11
CHRNA7-231	ENST00000637786	RTL5	Q5HYW3	569 aa	Predicted RBP	28.21	■■■□□ 2.11
CHRNA7-231	ENST00000637786	PANK1	Q8TE04	598 aa		28.21	■■■□□ 2.11
CHRNA7-231	ENST00000637786	NLRP3	Q96P20	1036 aa		28.2	■■■□□ 2.1
CHRNA7-231	ENST00000637786	PLA2G12B	Q9BX93	195 aa		28.2	■■■□□ 2.1
CHRNA7-231	ENST00000637786	FHDC1	Q9C0D6	1143 aa	Predicted RBP	28.2	■■■□□ 2.1
CHRNA7-231	ENST00000637786	PDE8A	O60658	829 aa		28.19	■■■□□ 2.1
CHRNA7-231	ENST00000637786	HCLS1	P14317	486 aa	Predicted RBP	28.19	■■■□□ 2.1
CHRNA7-231	ENST00000637786	DLEC1	Q9Y238	1755 aa		28.19	■■■□□ 2.1
CHRNA7-231	ENST00000637786	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.18	■■■□□ 2.1
CHRNA7-231	ENST00000637786	CRY2	Q49AN0	593 aa		28.18	■■■□□ 2.1
CHRNA7-231	ENST00000637786	ITPRIP	Q8IWB1	547 aa		28.18	■■■□□ 2.1
CHRNA7-231	ENST00000637786	JARID2	Q92833	1246 aa	Predicted RBP	28.18	■■■□□ 2.1
CHRNA7-231	ENST00000637786	HDAC5	Q9UQL6	1122 aa		28.18	■■■□□ 2.1
CHRNA7-231	ENST00000637786	MVP	Q14764	893 aa	Known RBP	28.17	■■■□□ 2.1
CHRNA7-231	ENST00000637786	KLHL34	Q8N239	644 aa		28.17	■■■□□ 2.1
CHRNA7-231	ENST00000637786	COL11A2	P13942	1736 aa	Predicted RBP	28.17	■■■□□ 2.1
CHRNA7-231	ENST00000637786	SRCAP	Q6ZRS2	3230 aa		28.16	■■■□□ 2.1
CHRNA7-231	ENST00000637786	GNAI3	P08754	354 aa		28.16	■■■□□ 2.1
CHRNA7-231	ENST00000637786	C20orf194	Q5TEA3	1177 aa		28.16	■■■□□ 2.1
CHRNA7-231	ENST00000637786	SUPT16H	Q9Y5B9	1047 aa	Known RBP	28.16	■■■□□ 2.1
CHRNA7-231	ENST00000637786		H0YIN7	160 aa		28.15	■■■□□ 2.1
CHRNA7-231	ENST00000637786	SF3B3	Q15393	1217 aa	Known RBP	28.15	■■■□□ 2.1
CHRNA7-231	ENST00000637786	SYT17	Q9BSW7	474 aa		28.15	■■■□□ 2.1
CHRNA7-231	ENST00000637786	UBTFL1	P0CB47	393 aa	Predicted RBP	28.14	■■■□□ 2.1
CHRNA7-231	ENST00000637786	SRGN	P10124	158 aa		28.14	■■■□□ 2.1
CHRNA7-231	ENST00000637786	C2CD5	Q86YS7	1000 aa		28.14	■■■□□ 2.1
CHRNA7-231	ENST00000637786	MEIS3	Q99687	375 aa		28.14	■■■□□ 2.1
CHRNA7-231	ENST00000637786	DDX19B	Q9UMR2	479 aa		28.14	■■■□□ 2.1
CHRNA7-231	ENST00000637786	CTSW	P56202	376 aa		28.13	■■■□□ 2.09
CHRNA7-231	ENST00000637786	C3orf67	Q6ZVT6	689 aa		28.13	■■■□□ 2.09
CHRNA7-231	ENST00000637786	CHMP4B	Q9H444	224 aa	Known RBP	28.13	■■■□□ 2.09
CHRNA7-231	ENST00000637786	BRCA1	P38398	1863 aa	Known RBP	28.12	■■■□□ 2.09
CHRNA7-231	ENST00000637786	ZBTB7B	O15156	539 aa	Predicted RBP	28.12	■■■□□ 2.09
CHRNA7-231	ENST00000637786	NPR1	P16066	1061 aa		28.12	■■■□□ 2.09
CHRNA7-231	ENST00000637786	DPEP1	P16444	411 aa		28.12	■■■□□ 2.09
CHRNA7-231	ENST00000637786	HOXA10	P31260	410 aa	Predicted RBP	28.12	■■■□□ 2.09
CHRNA7-231	ENST00000637786	MASTL	Q96GX5	879 aa		28.12	■■■□□ 2.09
CHRNA7-231	ENST00000637786	COG6	Q9Y2V7	657 aa		28.12	■■■□□ 2.09

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