RNA–Protein interactions for RNA: ENST00000637121.1

EFHC1-228, Transcript of EF-hand domain containing 1, humanhuman

TSL 3

Gene EFHC1, Length 2,786 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-228ENST00000637121 LSG1Q9H089 658 aaKnown RBP6.3□□□□□ -1.4
EFHC1-228ENST00000637121 PRDM16Q9HAZ2 1276 aa6.3□□□□□ -1.4
EFHC1-228ENST00000637121 IL1RAPL2Q9NP60 686 aa6.3□□□□□ -1.4
EFHC1-228ENST00000637121 SSUH2Q9Y2M2 353 aa6.3□□□□□ -1.4
EFHC1-228ENST00000637121 TRPM3Q9HCF6 1732 aaPredicted RBP6.3□□□□□ -1.4
EFHC1-228ENST00000637121 NBPF7P0C2Y1 421 aaPredicted RBP6.3□□□□□ -1.4
EFHC1-228ENST00000637121 PDCP20941 246 aa6.3□□□□□ -1.4
EFHC1-228ENST00000637121 NUTM2GQ5VZR2 741 aa6.3□□□□□ -1.4
EFHC1-228ENST00000637121 GPT2Q8TD30 523 aa6.3□□□□□ -1.4
EFHC1-228ENST00000637121 HMG20BQ9P0W2 317 aa6.3□□□□□ -1.4
EFHC1-228ENST00000637121 CCDC39Q9UFE4 941 aa6.3□□□□□ -1.4
EFHC1-228ENST00000637121 PALD1Q9ULE6 856 aa6.3□□□□□ -1.4
EFHC1-228ENST00000637121 MRC1P22897 1456 aa6.3□□□□□ -1.4
EFHC1-228ENST00000637121 GRM8O00222 908 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 G3BP1Q13283 466 aaKnown RBP eCLIP6.29□□□□□ -1.4
EFHC1-228ENST00000637121 PKP1Q13835 747 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 ANKRD24Q8TF21 1146 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 ALDH8A1Q9H2A2 487 aaPredicted RBP6.29□□□□□ -1.4
EFHC1-228ENST00000637121 NOL7Q9UMY1 257 aaKnown RBP6.29□□□□□ -1.4
EFHC1-228ENST00000637121 SMC3Q9UQE7 1217 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 SNX14Q9Y5W7 946 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 ADAMTSL3P82987 1691 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 ZNF500O60304 480 aaPredicted RBP6.29□□□□□ -1.4
EFHC1-228ENST00000637121 UBE2HP62256 183 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 CCDC183Q5T5S1 534 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 TSHZ3Q63HK5 1081 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 NUTM1Q86Y26 1132 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 UNC5CLQ8IV45 518 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 USHBP1Q8N6Y0 703 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 CHMP4CQ96CF2 233 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 TSPY26PQ9H489 355 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 LGR6Q9HBX8 967 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 MAP3K2Q9Y2U5 619 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 CYP46A1Q9Y6A2 500 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 ERBB3P21860 1342 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 ERBB4Q15303 1308 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 CCDC171Q6TFL3 1326 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 STX6O43752 255 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 ZSCAN22P10073 491 aaPredicted RBP6.29□□□□□ -1.4
EFHC1-228ENST00000637121 PRIM1P49642 420 aaKnown RBP6.29□□□□□ -1.4
EFHC1-228ENST00000637121 KRT32Q14532 448 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 RAPGEF4Q8WZA2 1011 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 ZSWIM6Q9HCJ5 1215 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 TMEM63CQ9P1W3 806 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 SPG7Q9UQ90 795 aa6.29□□□□□ -1.4
EFHC1-228ENST00000637121 UPF3BQ9BZI7 483 aaKnown RBP6.28□□□□□ -1.4
EFHC1-228ENST00000637121 SCN11AQ9UI33 1791 aa6.28□□□□□ -1.4
EFHC1-228ENST00000637121 PXDNQ92626 1479 aa6.28□□□□□ -1.4
EFHC1-228ENST00000637121 ALS2Q96Q42 1657 aa6.28□□□□□ -1.4
EFHC1-228ENST00000637121 TSGA10IPQ3SY00 556 aa6.28□□□□□ -1.4
EFHC1-228ENST00000637121 MPRIPQ6WCQ1 1025 aa6.28□□□□□ -1.4
EFHC1-228ENST00000637121 RPAP1Q9BWH6 1393 aaPredicted RBP6.28□□□□□ -1.4
EFHC1-228ENST00000637121 RGPD2P0DJD1 1756 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 PARP4Q9UKK3 1724 aaKnown RBP6.27□□□□□ -1.41
EFHC1-228ENST00000637121 SYCE3A1L190 88 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 OFD1O75665 1012 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 F13A1P00488 732 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 TATP17735 454 aaPredicted RBP6.27□□□□□ -1.41
EFHC1-228ENST00000637121 CASTP20810 708 aaKnown RBP6.27□□□□□ -1.41
EFHC1-228ENST00000637121 AK2P54819 239 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 ZNF790Q6PG37 636 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 CWC27Q6UX04 472 aaKnown RBP6.27□□□□□ -1.41
EFHC1-228ENST00000637121 RUFY3Q7L099 469 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 CNPY4Q8N129 248 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 RBSNQ9H1K0 784 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 C19orf44Q9H6X5 657 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 PDRG1Q9NUG6 133 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 ZKSCAN5Q9Y2L8 839 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 JCADQ9P266 1359 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 C1orf167Q5SNV9 1468 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 NPHP3Q7Z494 1330 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 RRP9O43818 475 aaKnown RBP6.27□□□□□ -1.41
EFHC1-228ENST00000637121 TPM3P06753 285 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 NECTIN1Q15223 517 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 RIC3Q7Z5B4 369 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 AACSQ86V21 672 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 IFNL2Q8IZJ0 200 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 MAP4K1Q92918 833 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 SLC52A2Q9HAB3 445 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 COPRSQ9NQ92 184 aa6.27□□□□□ -1.41
EFHC1-228ENST00000637121 ELP1O95163 1332 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 KCNJ4P48050 445 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 KRT28Q7Z3Y7 464 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 DCAF5Q96JK2 942 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 METTL22Q9BUU2 404 aaPredicted RBP6.26□□□□□ -1.41
EFHC1-228ENST00000637121 MED23Q9ULK4 1368 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 KDM4AO75164 1064 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 SNRPA1P09661 255 aaKnown RBP6.26□□□□□ -1.41
EFHC1-228ENST00000637121 SYT1P21579 422 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 GRIPAP1Q4V328 841 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 USP48Q86UV5 1035 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 TTC5Q8N0Z6 440 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 LRRC59Q96AG4 307 aaKnown RBP6.26□□□□□ -1.41
EFHC1-228ENST00000637121 JAKMIP1Q96N16 626 aaKnown RBP6.26□□□□□ -1.41
EFHC1-228ENST00000637121 KIF3AQ9Y496 699 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 PKD1L3Q7Z443 1732 aa6.26□□□□□ -1.41
EFHC1-228ENST00000637121 LAMB4A4D0S4 1761 aa6.25□□□□□ -1.41
EFHC1-228ENST00000637121 NEURL1BA8MQ27 555 aa6.25□□□□□ -1.41
EFHC1-228ENST00000637121 VASPP50552 380 aaPredicted RBP6.25□□□□□ -1.41
EFHC1-228ENST00000637121 KRT85P78386 507 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms