RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 SYNE4Q8N205 404 aa10.25□□□□□ -0.77
CACNA1A-232ENST00000636966 NEURL1BA8MQ27 555 aa10.25□□□□□ -0.77
CACNA1A-232ENST00000636966 TXNRD1Q16881 649 aa10.25□□□□□ -0.77
CACNA1A-232ENST00000636966 PLBD2Q8NHP8 589 aa10.25□□□□□ -0.77
CACNA1A-232ENST00000636966 MYD88Q99836 296 aa10.25□□□□□ -0.77
CACNA1A-232ENST00000636966 METTL22Q9BUU2 404 aaPredicted RBP10.25□□□□□ -0.77
CACNA1A-232ENST00000636966 LTBP1Q14766 1721 aa10.24□□□□□ -0.77
CACNA1A-232ENST00000636966 IL6STP40189 918 aaPredicted RBP10.24□□□□□ -0.77
CACNA1A-232ENST00000636966 ZNF827Q17R98 1081 aa10.24□□□□□ -0.77
CACNA1A-232ENST00000636966 BCL2L12Q9HB09 334 aa10.24□□□□□ -0.77
CACNA1A-232ENST00000636966 PODXL2Q9NZ53 605 aa10.24□□□□□ -0.77
CACNA1A-232ENST00000636966 UBN2Q6ZU65 1347 aa10.24□□□□□ -0.77
CACNA1A-232ENST00000636966 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
CACNA1A-232ENST00000636966 RIC3Q7Z5B4 369 aa10.24□□□□□ -0.77
CACNA1A-232ENST00000636966 CAMTA2O94983 1202 aa10.24□□□□□ -0.77
CACNA1A-232ENST00000636966 NUP98P52948 1817 aa10.24□□□□□ -0.77
CACNA1A-232ENST00000636966 CNTNAP4Q9C0A0 1308 aa10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 PLSCR1O15162 318 aa10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 CASP7P55210 303 aa10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 BECN1Q14457 450 aa10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 DEFB132Q7Z7B7 95 aa10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 COL15A1P39059 1388 aa10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 CCT4P50991 539 aaKnown RBP10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 EPHA10Q5JZY3 1008 aa10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 SRP68Q9UHB9 627 aaKnown RBP10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 MAP3K15Q6ZN16 1313 aa10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 EN1Q05925 392 aaPredicted RBP10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 EZH2Q15910 746 aaKnown RBP10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 CAMKK2Q96RR4 588 aa10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 RTN4Q9NQC3 1192 aaKnown RBP10.23□□□□□ -0.77
CACNA1A-232ENST00000636966 AFDNP55196 1824 aaKnown RBP10.22□□□□□ -0.77
CACNA1A-232ENST00000636966 GNPATO15228 680 aa10.22□□□□□ -0.77
CACNA1A-232ENST00000636966 GCKRQ14397 625 aa10.22□□□□□ -0.77
CACNA1A-232ENST00000636966 DZIP3Q86Y13 1208 aaKnown RBP10.22□□□□□ -0.77
CACNA1A-232ENST00000636966 SRCIN1Q9C0H9 1055 aa10.22□□□□□ -0.77
CACNA1A-232ENST00000636966 PDZRN3Q9UPQ7 1066 aa10.22□□□□□ -0.77
CACNA1A-232ENST00000636966 PNMA6EA0A0J9YXQ4 647 aa10.22□□□□□ -0.77
CACNA1A-232ENST00000636966 LINS1Q8NG48 757 aa10.22□□□□□ -0.77
CACNA1A-232ENST00000636966 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
CACNA1A-232ENST00000636966 CEP85Q6P2H3 762 aa10.21□□□□□ -0.77
CACNA1A-232ENST00000636966 ISCA1Q9BUE6 129 aa10.21□□□□□ -0.77
CACNA1A-232ENST00000636966 LRRFIP2Q9Y608 721 aaKnown RBP10.21□□□□□ -0.77
CACNA1A-232ENST00000636966 UTYO14607 1347 aa10.21□□□□□ -0.77
CACNA1A-232ENST00000636966 PHF14O94880 888 aa10.21□□□□□ -0.78
CACNA1A-232ENST00000636966 GIGYF2Q6Y7W6 1299 aaKnown RBP10.21□□□□□ -0.78
CACNA1A-232ENST00000636966 PDGFDQ9GZP0 370 aaPredicted RBP10.21□□□□□ -0.78
CACNA1A-232ENST00000636966 GPTP24298 496 aa10.21□□□□□ -0.78
CACNA1A-232ENST00000636966 RC3H1Q5TC82 1133 aaKnown RBP10.21□□□□□ -0.78
CACNA1A-232ENST00000636966 AKT1S1Q96B36 256 aa10.21□□□□□ -0.78
CACNA1A-232ENST00000636966 SUCLG2Q96I99 432 aa10.21□□□□□ -0.78
CACNA1A-232ENST00000636966 BRCA1P38398 1863 aaKnown RBP10.21□□□□□ -0.78
CACNA1A-232ENST00000636966 MYH3P11055 1940 aa10.2□□□□□ -0.78
CACNA1A-232ENST00000636966 COL4A1P02462 1669 aa10.2□□□□□ -0.78
CACNA1A-232ENST00000636966 TCIRG1Q13488 830 aa10.2□□□□□ -0.78
CACNA1A-232ENST00000636966 RPS6KA4O75676 772 aa10.2□□□□□ -0.78
CACNA1A-232ENST00000636966 DDX58O95786 925 aaKnown RBP10.2□□□□□ -0.78
CACNA1A-232ENST00000636966 SLC27A3Q5K4L6 730 aa10.2□□□□□ -0.78
CACNA1A-232ENST00000636966 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.2□□□□□ -0.78
CACNA1A-232ENST00000636966 GRM8O00222 908 aa10.19□□□□□ -0.78
CACNA1A-232ENST00000636966 USPL1Q5W0Q7 1092 aa10.19□□□□□ -0.78
CACNA1A-232ENST00000636966 ZNF34Q8IZ26 560 aa10.19□□□□□ -0.78
CACNA1A-232ENST00000636966 CHMP4AQ9BY43 222 aa10.19□□□□□ -0.78
CACNA1A-232ENST00000636966 NLRP10Q86W26 655 aa10.19□□□□□ -0.78
CACNA1A-232ENST00000636966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.19□□□□□ -0.78
CACNA1A-232ENST00000636966 ANKRD44Q8N8A2 993 aa10.19□□□□□ -0.78
CACNA1A-232ENST00000636966 FAM89AQ96GI7 184 aa10.19□□□□□ -0.78
CACNA1A-232ENST00000636966 ALDH1L1O75891 902 aa10.18□□□□□ -0.78
CACNA1A-232ENST00000636966 TBC1D9BQ66K14 1250 aa10.18□□□□□ -0.78
CACNA1A-232ENST00000636966 UBE3BQ7Z3V4 1068 aa10.18□□□□□ -0.78
CACNA1A-232ENST00000636966 ERVV-1B6SEH8 477 aa10.18□□□□□ -0.78
CACNA1A-232ENST00000636966 H7C1W4 665 aa10.18□□□□□ -0.78
CACNA1A-232ENST00000636966 SUSD4Q5VX71 490 aa10.18□□□□□ -0.78
CACNA1A-232ENST00000636966 BICC1Q9H694 974 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-232ENST00000636966 A0A087WZG4 1122 aa10.18□□□□□ -0.78
CACNA1A-232ENST00000636966 RGL2O15211 777 aa10.18□□□□□ -0.78
CACNA1A-232ENST00000636966 DEKP35659 375 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-232ENST00000636966 HDAC1Q13547 482 aaPredicted RBP10.18□□□□□ -0.78
CACNA1A-232ENST00000636966 FOXO4P98177 505 aa10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 KIF6Q6ZMV9 814 aa10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 MFAP1P55081 439 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 TRIM28Q13263 835 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 KLHDC4Q8TBB5 520 aa10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 RTCBQ9Y3I0 505 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 USP42Q9H9J4 1324 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 GNAI2P04899 355 aa10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 UBTFL1P0CB47 393 aaPredicted RBP10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 C8orf34Q49A92 452 aa10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 ANKRD45Q5TZF3 282 aa10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 ILDR2Q71H61 639 aa10.17□□□□□ -0.78
CACNA1A-232ENST00000636966 C3orf67Q6ZVT6 689 aa10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 COL23A1Q86Y22 540 aaPredicted RBP10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 LNPKQ9C0E8 428 aa10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 NARFQ9UHQ1 456 aa10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 CCDC191Q8NCU4 936 aa10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 C9orf78Q9NZ63 289 aaPredicted RBP10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 PNPLA7Q6ZV29 1317 aa10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 FAM177BA6PVY3 158 aa10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 GYS1P13807 737 aa10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 PPP1R42Q7Z4L9 355 aa10.16□□□□□ -0.78
CACNA1A-232ENST00000636966 SLC51AQ86UW1 340 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms