RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	SAMD1	Q6SPF0	538 aa	Predicted RBP	4.9	□□□□□ -1.63
CHD2-225	ENST00000636861	NLRP13	Q86W25	1043 aa		4.9	□□□□□ -1.63
CHD2-225	ENST00000636861	NGEF	Q8N5V2	710 aa		4.9	□□□□□ -1.63
CHD2-225	ENST00000636861	PDLIM2	Q96JY6	352 aa		4.9	□□□□□ -1.63
CHD2-225	ENST00000636861	MYCBP	Q99417	103 aa	Predicted RBP	4.9	□□□□□ -1.63
CHD2-225	ENST00000636861	RBM28	Q9NW13	759 aa	Known RBP	4.9	□□□□□ -1.63
CHD2-225	ENST00000636861	ABT1	Q9ULW3	272 aa	Known RBP	4.9	□□□□□ -1.63
CHD2-225	ENST00000636861	AKAP11	Q9UKA4	1901 aa		4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	SCN4A	P35499	1836 aa		4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	VGLL3	A8MV65	326 aa		4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	KCNJ4	P48050	445 aa		4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	IRX5	P78411	483 aa	Predicted RBP	4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	CBX1	P83916	185 aa		4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	GRIPAP1	Q4V328	841 aa		4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	NOM1	Q5C9Z4	860 aa	Known RBP	4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	RNF20	Q5VTR2	975 aa		4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	CIAPIN1	Q6FI81	312 aa		4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	CTU1	Q7Z7A3	348 aa	Known RBP	4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	DHX37	Q8IY37	1157 aa	Known RBP	4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	PLCD3	Q8N3E9	789 aa		4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	MNS1	Q8NEH6	495 aa		4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	SYAP1	Q96A49	352 aa	Predicted RBP	4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	P2RX7	Q99572	595 aa	Known RBP	4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	TBC1D2	Q9BYX2	928 aa		4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	CWC15	Q9P013	229 aa	Known RBP	4.89	□□□□□ -1.63
CHD2-225	ENST00000636861	REV3L	O60673	3130 aa		4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	ZNF318	Q5VUA4	2279 aa		4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	KIF1C	O43896	1103 aa	Known RBP	4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	MAP2K2	P36507	400 aa		4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	BRPF1	P55201	1214 aa	Predicted RBP	4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	SLC27A3	Q5K4L6	730 aa		4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	CAVIN1	Q6NZI2	390 aa	Known RBP	4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	WWC1	Q8IX03	1113 aa		4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	CNPY4	Q8N129	248 aa		4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	DEFB123	Q8N688	67 aa		4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	FAM184A	Q8NB25	1140 aa		4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	SNX21	Q969T3	373 aa		4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	MTMR10	Q9NXD2	777 aa		4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	ZNF292	O60281	2723 aa		4.88	□□□□□ -1.63
CHD2-225	ENST00000636861	ASH1L	Q9NR48	2969 aa	Known RBP	4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	RGPD5	Q99666	1765 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	TULP2	O00295	520 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	HTATSF1	O43719	755 aa	Known RBP	4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	MBD3	O95983	291 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	SET	Q01105	290 aa	Predicted RBP	4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	LMOD3	Q0VAK6	560 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	RAB3GAP1	Q15042	981 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	NBPF20	Q3BBV1	942 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	HSP90AB3P	Q58FF7	597 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	TEX35	Q5T0J7	233 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	CLEC17A	Q6ZS10	378 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	WAPL	Q7Z5K2	1190 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	LDHD	Q86WU2	507 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	TICAM2	Q86XR7	235 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	SMC5	Q8IY18	1101 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	KRT222	Q8N1A0	295 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	PIBF1	Q8WXW3	757 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	DDX49	Q9Y6V7	483 aa	Known RBP	4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	DNAH14	Q0VDD8	3507 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	NPC1L1	Q9UHC9	1359 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	ABCC6	O95255	1503 aa		4.87	□□□□□ -1.63
CHD2-225	ENST00000636861	PPL	O60437	1756 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	TRIM6-TRIM34	B2RNG4	842 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	PATL2	C9JE40	543 aa	Known RBP	4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	TNFRSF10A	O00220	468 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	ECE1	P42892	770 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	SSR1	P43307	286 aa	Known RBP	4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	GTF2A1	P52655	376 aa	Predicted RBP	4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	TGFB2	P61812	414 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	NUCB2	P80303	420 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	GPS2	Q13227	327 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	UVSSA	Q2YD98	709 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	MAP1S	Q66K74	1059 aa	Predicted RBP	4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	ANKRD7	Q92527	254 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	NCAPG	Q9BPX3	1015 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	PLCD4	Q9BRC7	762 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	TRIM34	Q9BYJ4	488 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	RASSF4	Q9H2L5	321 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	KNSTRN	Q9Y448	316 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	ARIH1	Q9Y4X5	557 aa	Predicted RBP	4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	RAD50	Q92878	1312 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	KIF16B	Q96L93	1317 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	KANK1	Q14678	1352 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	USP47	Q96K76	1375 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	ACACB	O00763	2458 aa		4.86	□□□□□ -1.63
CHD2-225	ENST00000636861	TSPY4	P0CV99	314 aa		4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	TSPY10	P0CW01	314 aa		4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	EN2	P19622	333 aa	Predicted RBP	4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	PSEN1	P49768	467 aa		4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	FKBP5	Q13451	457 aa	Predicted RBP	4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	PDE3A	Q14432	1141 aa		4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	RABEP1	Q15276	862 aa		4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	CST9	Q5W186	159 aa		4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	CCDC91	Q7Z6B0	441 aa		4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	RPAIN	Q86UA6	219 aa		4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	TXLNB	Q8N3L3	684 aa		4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	TACO1	Q9BSH4	297 aa	Known RBP	4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	CDCA7	Q9BWT1	371 aa	Predicted RBP	4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	C22orf23	Q9BZE7	217 aa		4.85	□□□□□ -1.63
CHD2-225	ENST00000636861	SMC4	Q9NTJ3	1288 aa		4.85	□□□□□ -1.63

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