RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 TIAM2Q8IVF5 1701 aa19.48■□□□□ 0.71
CACNA1A-230ENST00000636768 ANP32CO43423 234 aa19.48■□□□□ 0.71
CACNA1A-230ENST00000636768 VEGFAP15692 232 aaPredicted RBP19.48■□□□□ 0.71
CACNA1A-230ENST00000636768 FKBP4Q02790 459 aaKnown RBP eCLIP19.48■□□□□ 0.71
CACNA1A-230ENST00000636768 OLFM4Q6UX06 510 aa19.48■□□□□ 0.71
CACNA1A-230ENST00000636768 RBM17Q96I25 401 aaKnown RBP19.48■□□□□ 0.71
CACNA1A-230ENST00000636768 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
CACNA1A-230ENST00000636768 NUP98P52948 1817 aa19.48■□□□□ 0.71
CACNA1A-230ENST00000636768 ARFGEF2Q9Y6D5 1785 aa19.47■□□□□ 0.71
CACNA1A-230ENST00000636768 ZNF853P0CG23 659 aa19.47■□□□□ 0.71
CACNA1A-230ENST00000636768 RNF123Q5XPI4 1314 aa19.47■□□□□ 0.71
CACNA1A-230ENST00000636768 FER1L6Q2WGJ9 1857 aa19.46■□□□□ 0.71
CACNA1A-230ENST00000636768 HOXA10P31260 410 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-230ENST00000636768 APLP1P51693 650 aa19.46■□□□□ 0.71
CACNA1A-230ENST00000636768 FSTL1Q12841 308 aa19.46■□□□□ 0.71
CACNA1A-230ENST00000636768 TCIRG1Q13488 830 aa19.46■□□□□ 0.71
CACNA1A-230ENST00000636768 NLRP10Q86W26 655 aa19.46■□□□□ 0.71
CACNA1A-230ENST00000636768 NLRP3Q96P20 1036 aa19.46■□□□□ 0.71
CACNA1A-230ENST00000636768 MRS2Q9HD23 443 aa19.46■□□□□ 0.71
CACNA1A-230ENST00000636768 ZNF277Q9NRM2 450 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-230ENST00000636768 HYPKQ9NX55 129 aa19.46■□□□□ 0.71
CACNA1A-230ENST00000636768 CACNA1SQ13698 1873 aa19.45■□□□□ 0.7
CACNA1A-230ENST00000636768 C3orf67Q6ZVT6 689 aa19.45■□□□□ 0.7
CACNA1A-230ENST00000636768 PLBD2Q8NHP8 589 aa19.45■□□□□ 0.7
CACNA1A-230ENST00000636768 TRMT112Q9UI30 125 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-230ENST00000636768 ELL2O00472 640 aaPredicted RBP19.44■□□□□ 0.7
CACNA1A-230ENST00000636768 ANKRD13DQ6ZTN6 518 aa19.44■□□□□ 0.7
CACNA1A-230ENST00000636768 SMC1BQ8NDV3 1235 aa19.44■□□□□ 0.7
CACNA1A-230ENST00000636768 CRAMP1Q96RY5 1269 aa19.44■□□□□ 0.7
CACNA1A-230ENST00000636768 PPEF1O14829 653 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-230ENST00000636768 SLC10A5Q5PT55 438 aa19.43■□□□□ 0.7
CACNA1A-230ENST00000636768 CC2D2BQ6DHV5 1058 aa19.43■□□□□ 0.7
CACNA1A-230ENST00000636768 SYNE4Q8N205 404 aa19.43■□□□□ 0.7
CACNA1A-230ENST00000636768 CEP350Q5VT06 3117 aa19.42■□□□□ 0.7
CACNA1A-230ENST00000636768 TCERG1O14776 1098 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-230ENST00000636768 DDNO94850 711 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-230ENST00000636768 HCLS1P14317 486 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-230ENST00000636768 IARSP41252 1262 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-230ENST00000636768 ZNF428Q96B54 188 aa19.42■□□□□ 0.7
CACNA1A-230ENST00000636768 PSMD1Q99460 953 aa19.42■□□□□ 0.7
CACNA1A-230ENST00000636768 TMX4Q9H1E5 349 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-230ENST00000636768 SH3TC1Q8TE82 1336 aa19.42■□□□□ 0.7
CACNA1A-230ENST00000636768 GOLGA2Q08379 1002 aa19.41■□□□□ 0.7
CACNA1A-230ENST00000636768 GRIPAP1Q4V328 841 aa19.4■□□□□ 0.7
CACNA1A-230ENST00000636768 C8orf58Q8NAV2 365 aa19.4■□□□□ 0.7
CACNA1A-230ENST00000636768 POTECB2RU33 542 aa19.39■□□□□ 0.69
CACNA1A-230ENST00000636768 ATP5J2-PTCD1G3V325 749 aa19.39■□□□□ 0.69
CACNA1A-230ENST00000636768 CCDC27Q2M243 656 aa19.39■□□□□ 0.69
CACNA1A-230ENST00000636768 RIC3Q7Z5B4 369 aa19.39■□□□□ 0.69
CACNA1A-230ENST00000636768 JDP2Q8WYK2 163 aa19.39■□□□□ 0.69
CACNA1A-230ENST00000636768 CHMP4AQ9BY43 222 aa19.39■□□□□ 0.69
CACNA1A-230ENST00000636768 CCDC88AQ3V6T2 1871 aa19.39■□□□□ 0.69
CACNA1A-230ENST00000636768 ABCC4O15439 1325 aa19.38■□□□□ 0.69
CACNA1A-230ENST00000636768 DDX46Q7L014 1031 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-230ENST00000636768 WWC1Q8IX03 1113 aa19.38■□□□□ 0.69
CACNA1A-230ENST00000636768 SNED1Q8TER0 1413 aa19.38■□□□□ 0.69
CACNA1A-230ENST00000636768 TSR2Q969E8 191 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-230ENST00000636768 WDR90Q96KV7 1748 aa19.38■□□□□ 0.69
CACNA1A-230ENST00000636768 ISCA1Q9BUE6 129 aa19.38■□□□□ 0.69
CACNA1A-230ENST00000636768 ZNF541Q9H0D2 1346 aa19.38■□□□□ 0.69
CACNA1A-230ENST00000636768 PHAXQ9H814 394 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-230ENST00000636768 IQCA1LA6NCM1 817 aa19.37■□□□□ 0.69
CACNA1A-230ENST00000636768 CCDC30Q5VVM6 783 aa19.37■□□□□ 0.69
CACNA1A-230ENST00000636768 SLC51AQ86UW1 340 aa19.37■□□□□ 0.69
CACNA1A-230ENST00000636768 ATP6V0A2Q9Y487 856 aa19.37■□□□□ 0.69
CACNA1A-230ENST00000636768 ANKRD36CQ5JPF3 1778 aa19.37■□□□□ 0.69
CACNA1A-230ENST00000636768 DICER1Q9UPY3 1922 aaKnown RBP19.36■□□□□ 0.69
CACNA1A-230ENST00000636768 FAM89AQ96GI7 184 aa19.36■□□□□ 0.69
CACNA1A-230ENST00000636768 FZD9O00144 591 aa19.35■□□□□ 0.69
CACNA1A-230ENST00000636768 BBOX1O75936 387 aa19.35■□□□□ 0.69
CACNA1A-230ENST00000636768 LARGE2Q8N3Y3 721 aa19.35■□□□□ 0.69
CACNA1A-230ENST00000636768 TSPYL6Q8N831 410 aa19.35■□□□□ 0.69
CACNA1A-230ENST00000636768 L3MBTL3Q96JM7 780 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-230ENST00000636768 DDX58O95786 925 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-230ENST00000636768 EIF6P56537 245 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-230ENST00000636768 HTRA3P83110 453 aa19.34■□□□□ 0.69
CACNA1A-230ENST00000636768 TRIM28Q13263 835 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-230ENST00000636768 GRAPQ13588 217 aa19.34■□□□□ 0.69
CACNA1A-230ENST00000636768 RTL5Q5HYW3 569 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-230ENST00000636768 GRAPLQ8TC17 118 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-230ENST00000636768 MYD88Q99836 296 aa19.33■□□□□ 0.68
CACNA1A-230ENST00000636768 STK31Q9BXU1 1019 aa19.33■□□□□ 0.68
CACNA1A-230ENST00000636768 SALL2Q9Y467 1007 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-230ENST00000636768 IL16Q14005 1332 aa19.32■□□□□ 0.68
CACNA1A-230ENST00000636768 IRS4O14654 1257 aaPredicted RBP19.32■□□□□ 0.68
CACNA1A-230ENST00000636768 PPIP5K2O43314 1243 aa19.32■□□□□ 0.68
CACNA1A-230ENST00000636768 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-230ENST00000636768 DPP8Q6V1X1 898 aaPredicted RBP19.32■□□□□ 0.68
CACNA1A-230ENST00000636768 SP8Q8IXZ3 490 aa19.32■□□□□ 0.68
CACNA1A-230ENST00000636768 NIM1KQ8IY84 436 aa19.32■□□□□ 0.68
CACNA1A-230ENST00000636768 GPC2Q8N158 579 aa19.32■□□□□ 0.68
CACNA1A-230ENST00000636768 SUPT20HQ8NEM7 779 aa19.32■□□□□ 0.68
CACNA1A-230ENST00000636768 TAF1DQ9H5J8 278 aaPredicted RBP19.32■□□□□ 0.68
CACNA1A-230ENST00000636768 HACL1Q9UJ83 578 aa19.32■□□□□ 0.68
CACNA1A-230ENST00000636768 POTEIP0CG38 1075 aa19.31■□□□□ 0.68
CACNA1A-230ENST00000636768 POTEJP0CG39 1038 aa19.31■□□□□ 0.68
CACNA1A-230ENST00000636768 AOC3Q16853 763 aa19.31■□□□□ 0.68
CACNA1A-230ENST00000636768 TWISTNBQ3B726 338 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-230ENST00000636768 CHADLQ6NUI6 762 aa19.31■□□□□ 0.68
CACNA1A-230ENST00000636768 MPNDQ8N594 471 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms