RNA–Protein interactions for RNA: ENST00000636721.1

CACNB4-231, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-231	ENST00000636721	ZGPAT	Q8N5A5	531 aa	Known RBP	11.4	□□□□□ -0.59
CACNB4-231	ENST00000636721	ZCRB1	Q8TBF4	217 aa	Known RBP	11.4	□□□□□ -0.59
CACNB4-231	ENST00000636721	ANP32B	Q92688	251 aa	Known RBP	11.4	□□□□□ -0.59
CACNB4-231	ENST00000636721	KAZALD1	Q96I82	304 aa		11.4	□□□□□ -0.59
CACNB4-231	ENST00000636721	MYD88	Q99836	296 aa		11.4	□□□□□ -0.59
CACNB4-231	ENST00000636721	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.4	□□□□□ -0.59
CACNB4-231	ENST00000636721	LIMCH1	Q9UPQ0	1083 aa		11.4	□□□□□ -0.59
CACNB4-231	ENST00000636721	SNX14	Q9Y5W7	946 aa		11.4	□□□□□ -0.59
CACNB4-231	ENST00000636721	NUP188	Q5SRE5	1749 aa		11.4	□□□□□ -0.59
CACNB4-231	ENST00000636721	MYL6B	P14649	208 aa		11.39	□□□□□ -0.59
CACNB4-231	ENST00000636721	PSMA5	P28066	241 aa		11.39	□□□□□ -0.59
CACNB4-231	ENST00000636721	VPS53	Q5VIR6	699 aa		11.39	□□□□□ -0.59
CACNB4-231	ENST00000636721	CWC27	Q6UX04	472 aa	Known RBP	11.39	□□□□□ -0.59
CACNB4-231	ENST00000636721	BRINP3	Q76B58	766 aa		11.39	□□□□□ -0.59
CACNB4-231	ENST00000636721	TTC14	Q96N46	770 aa		11.39	□□□□□ -0.59
CACNB4-231	ENST00000636721	ATP6V1D	Q9Y5K8	247 aa		11.39	□□□□□ -0.59
CACNB4-231	ENST00000636721	GLI3	P10071	1580 aa		11.38	□□□□□ -0.59
CACNB4-231	ENST00000636721	STRC	Q7RTU9	1775 aa		11.38	□□□□□ -0.59
CACNB4-231	ENST00000636721	SYAP1	Q96A49	352 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNB4-231	ENST00000636721	CARD10	Q9BWT7	1032 aa		11.38	□□□□□ -0.59
CACNB4-231	ENST00000636721	PRDM11	Q9NQV5	511 aa		11.38	□□□□□ -0.59
CACNB4-231	ENST00000636721	HMG20B	Q9P0W2	317 aa		11.38	□□□□□ -0.59
CACNB4-231	ENST00000636721	PA2G4	Q9UQ80	394 aa	Known RBP	11.38	□□□□□ -0.59
CACNB4-231	ENST00000636721	ZDHHC9	Q9Y397	364 aa		11.38	□□□□□ -0.59
CACNB4-231	ENST00000636721	USP16	Q9Y5T5	823 aa		11.38	□□□□□ -0.59
CACNB4-231	ENST00000636721	CCDC171	Q6TFL3	1326 aa		11.38	□□□□□ -0.59
CACNB4-231	ENST00000636721	COL5A2	P05997	1499 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNB4-231	ENST00000636721	NHSL1	Q5SYE7	1610 aa		11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	TCHH	Q07283	1943 aa		11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	SPEF2	Q9C093	1822 aa		11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	MAP4K4	O95819	1239 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	ATP5J	P18859	108 aa		11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	NCL	P19338	710 aa	Known RBP	11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	ANKRD1	Q15327	319 aa		11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	CHRNA2	Q15822	529 aa		11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	EAF2	Q96CJ1	260 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	GPR108	Q9NPR9	543 aa		11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	CYP46A1	Q9Y6A2	500 aa		11.37	□□□□□ -0.59
CACNB4-231	ENST00000636721	SHANK3	Q9BYB0	1731 aa		11.36	□□□□□ -0.59
CACNB4-231	ENST00000636721	IL2RB	P14784	551 aa		11.36	□□□□□ -0.59
CACNB4-231	ENST00000636721	NECTIN1	Q15223	517 aa		11.36	□□□□□ -0.59
CACNB4-231	ENST00000636721	CSPP1	Q1MSJ5	1256 aa		11.36	□□□□□ -0.59
CACNB4-231	ENST00000636721	TOM1L2	Q6ZVM7	507 aa		11.36	□□□□□ -0.59
CACNB4-231	ENST00000636721	CABLES1	Q8TDN4	633 aa		11.36	□□□□□ -0.59
CACNB4-231	ENST00000636721	MAP4K1	Q92918	833 aa		11.36	□□□□□ -0.59
CACNB4-231	ENST00000636721	ZSWIM6	Q9HCJ5	1215 aa		11.36	□□□□□ -0.59
CACNB4-231	ENST00000636721	ATG3	Q9NT62	314 aa		11.36	□□□□□ -0.59
CACNB4-231	ENST00000636721		H7C1W4	665 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	PRPF40A	O75400	957 aa	Known RBP	11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	KRT32	Q14532	448 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	TSGA10IP	Q3SY00	556 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	CCDC191	Q8NCU4	936 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	DDX17	Q92841	729 aa	Known RBP	11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	UPF3B	Q9BZI7	483 aa	Known RBP	11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	SLAIN2	Q9P270	581 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	FBXO3	Q9UK99	471 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721		A0A087WZG4	1122 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	PHF14	O94880	888 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	KCNJ4	P48050	445 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	RFX5	P48382	616 aa	Predicted RBP	11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	AK2	P54819	239 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	PTPN12	Q05209	780 aa	Known RBP	11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	CCDC173	Q0VFZ6	552 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	FSD1	Q9BTV5	496 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	IL25	Q9H293	177 aa		11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	CWC25	Q9NXE8	425 aa	Predicted RBP	11.35	□□□□□ -0.59
CACNB4-231	ENST00000636721	KCP	Q6ZWJ8	1503 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	JCAD	Q9P266	1359 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	TNS2	Q63HR2	1409 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	CAST	P20810	708 aa	Known RBP	11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	CASP7	P55210	303 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	PKP1	Q13835	747 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	TNNI3K	Q59H18	835 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	RUFY3	Q7L099	469 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	TMEM87A	Q8NBN3	555 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	CERK	Q8TCT0	537 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	TRIM44	Q96DX7	344 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	PDRG1	Q9NUG6	133 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	SMC3	Q9UQE7	1217 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	FPGT-TNNI3K	V9GXZ4	949 aa		11.34	□□□□□ -0.59
CACNB4-231	ENST00000636721	MED23	Q9ULK4	1368 aa		11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	TJP1	Q07157	1748 aa		11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	NMI	Q13287	307 aa	Predicted RBP	11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	ZSCAN23	Q3MJ62	389 aa		11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	CREB3L3	Q68CJ9	461 aa		11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	CAVIN1	Q6NZI2	390 aa	Known RBP	11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	UBE3B	Q7Z3V4	1068 aa		11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	RASEF	Q8IZ41	740 aa		11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	VSIG10	Q8N0Z9	540 aa		11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	JAKMIP1	Q96N16	626 aa	Known RBP	11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	RBM8A	Q9Y5S9	174 aa	Known RBP	11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.33	□□□□□ -0.6
CACNB4-231	ENST00000636721	CIAO1	O76071	339 aa		11.32	□□□□□ -0.6
CACNB4-231	ENST00000636721	LETM1	O95202	739 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNB4-231	ENST00000636721	ZSCAN22	P10073	491 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNB4-231	ENST00000636721	PDC	P20941	246 aa		11.32	□□□□□ -0.6
CACNB4-231	ENST00000636721	IL15	P40933	162 aa	Predicted RBP	11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms