RNA–Protein interactions for RNA: ENST00000636690.1

GABRB3-221, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-221ENST00000636690 LIMCH1Q9UPQ0 1083 aa8.47□□□□□ -1.05
GABRB3-221ENST00000636690 DDX49Q9Y6V7 483 aaKnown RBP8.47□□□□□ -1.05
GABRB3-221ENST00000636690 CCDC171Q6TFL3 1326 aa8.47□□□□□ -1.05
GABRB3-221ENST00000636690 MED23Q9ULK4 1368 aa8.47□□□□□ -1.05
GABRB3-221ENST00000636690 STRCQ7RTU9 1775 aa8.46□□□□□ -1.05
GABRB3-221ENST00000636690 CIAO1O76071 339 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 PHF14O94880 888 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 SASH1O94885 1247 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 ANXA1P04083 346 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 XRCC6P12956 609 aaKnown RBP eCLIP8.46□□□□□ -1.06
GABRB3-221ENST00000636690 TRIM28Q13263 835 aaKnown RBP8.46□□□□□ -1.06
GABRB3-221ENST00000636690 CSPP1Q1MSJ5 1256 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 TSHZ3Q63HK5 1081 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 CCDC191Q8NCU4 936 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.46□□□□□ -1.06
GABRB3-221ENST00000636690 MAP4K1Q92918 833 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 CHMP4CQ96CF2 233 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 ZSWIM6Q9HCJ5 1215 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 BRPF3Q9ULD4 1205 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 PALD1Q9ULE6 856 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 SNX14Q9Y5W7 946 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 PLCH1Q4KWH8 1693 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 ABCC12Q96J65 1359 aa8.46□□□□□ -1.06
GABRB3-221ENST00000636690 RPAP1Q9BWH6 1393 aaPredicted RBP8.46□□□□□ -1.06
GABRB3-221ENST00000636690 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
GABRB3-221ENST00000636690 H7C1W4 665 aa8.45□□□□□ -1.06
GABRB3-221ENST00000636690 RFX5P48382 616 aaPredicted RBP8.45□□□□□ -1.06
GABRB3-221ENST00000636690 CASP7P55210 303 aa8.45□□□□□ -1.06
GABRB3-221ENST00000636690 SLC39A6Q13433 755 aa8.45□□□□□ -1.06
GABRB3-221ENST00000636690 NECTIN1Q15223 517 aa8.45□□□□□ -1.06
GABRB3-221ENST00000636690 LRRFIP1Q32MZ4 808 aaKnown RBP8.45□□□□□ -1.06
GABRB3-221ENST00000636690 ZGPATQ8N5A5 531 aaKnown RBP8.45□□□□□ -1.06
GABRB3-221ENST00000636690 ANP32BQ92688 251 aaKnown RBP8.45□□□□□ -1.06
GABRB3-221ENST00000636690 EAF2Q96CJ1 260 aaPredicted RBP8.45□□□□□ -1.06
GABRB3-221ENST00000636690 MYD88Q99836 296 aa8.45□□□□□ -1.06
GABRB3-221ENST00000636690 SLAIN2Q9P270 581 aa8.45□□□□□ -1.06
GABRB3-221ENST00000636690 ZDHHC9Q9Y397 364 aa8.45□□□□□ -1.06
GABRB3-221ENST00000636690 SHANK3Q9BYB0 1731 aa8.45□□□□□ -1.06
GABRB3-221ENST00000636690 PALLDQ8WX93 1383 aa8.45□□□□□ -1.06
GABRB3-221ENST00000636690 PRAMEF22A3QJZ6 481 aa8.44□□□□□ -1.06
GABRB3-221ENST00000636690 LETM1O95202 739 aaPredicted RBP8.44□□□□□ -1.06
GABRB3-221ENST00000636690 PDCP20941 246 aa8.44□□□□□ -1.06
GABRB3-221ENST00000636690 PTPN12Q05209 780 aaKnown RBP8.44□□□□□ -1.06
GABRB3-221ENST00000636690 CCDC173Q0VFZ6 552 aa8.44□□□□□ -1.06
GABRB3-221ENST00000636690 AIMP1Q12904 312 aaKnown RBP8.44□□□□□ -1.06
GABRB3-221ENST00000636690 HS1BP3Q53T59 392 aa8.44□□□□□ -1.06
GABRB3-221ENST00000636690 USPL1Q5W0Q7 1092 aa8.44□□□□□ -1.06
GABRB3-221ENST00000636690 MCTP1Q6DN14 999 aa8.44□□□□□ -1.06
GABRB3-221ENST00000636690 CWC27Q6UX04 472 aaKnown RBP8.44□□□□□ -1.06
GABRB3-221ENST00000636690 TOM1L2Q6ZVM7 507 aa8.44□□□□□ -1.06
GABRB3-221ENST00000636690 PLA2G12BQ9BX93 195 aa8.44□□□□□ -1.06
GABRB3-221ENST00000636690 CWC25Q9NXE8 425 aaPredicted RBP8.44□□□□□ -1.06
GABRB3-221ENST00000636690 USP16Q9Y5T5 823 aa8.44□□□□□ -1.06
GABRB3-221ENST00000636690 CYP46A1Q9Y6A2 500 aa8.44□□□□□ -1.06
GABRB3-221ENST00000636690 COL22A1Q8NFW1 1626 aaPredicted RBP8.43□□□□□ -1.06
GABRB3-221ENST00000636690 COL14A1Q05707 1796 aaKnown RBP8.43□□□□□ -1.06
GABRB3-221ENST00000636690 A0A087WZG4 1122 aa8.43□□□□□ -1.06
GABRB3-221ENST00000636690 MYL6BP14649 208 aa8.43□□□□□ -1.06
GABRB3-221ENST00000636690 NCLP19338 710 aaKnown RBP8.43□□□□□ -1.06
GABRB3-221ENST00000636690 IL15P40933 162 aaPredicted RBP8.43□□□□□ -1.06
GABRB3-221ENST00000636690 CHRNA2Q15822 529 aa8.43□□□□□ -1.06
GABRB3-221ENST00000636690 TNNI3KQ59H18 835 aa8.43□□□□□ -1.06
GABRB3-221ENST00000636690 RUFY3Q7L099 469 aa8.43□□□□□ -1.06
GABRB3-221ENST00000636690 PPP1R9BQ96SB3 815 aa8.43□□□□□ -1.06
GABRB3-221ENST00000636690 HAUS7Q99871 368 aa8.43□□□□□ -1.06
GABRB3-221ENST00000636690 IL25Q9H293 177 aa8.43□□□□□ -1.06
GABRB3-221ENST00000636690 PA2G4Q9UQ80 394 aaKnown RBP8.43□□□□□ -1.06
GABRB3-221ENST00000636690 FPGT-TNNI3KV9GXZ4 949 aa8.43□□□□□ -1.06
GABRB3-221ENST00000636690 SH3TC1Q8TE82 1336 aa8.43□□□□□ -1.06
GABRB3-221ENST00000636690 TJP1Q07157 1748 aa8.43□□□□□ -1.06
GABRB3-221ENST00000636690 HMGB1P09429 215 aaKnown RBP8.42□□□□□ -1.06
GABRB3-221ENST00000636690 AK2P54819 239 aa8.42□□□□□ -1.06
GABRB3-221ENST00000636690 HSP90AB3PQ58FF7 597 aa8.42□□□□□ -1.06
GABRB3-221ENST00000636690 CREB3L3Q68CJ9 461 aa8.42□□□□□ -1.06
GABRB3-221ENST00000636690 FAM184AQ8NB25 1140 aa8.42□□□□□ -1.06
GABRB3-221ENST00000636690 RGS22Q8NE09 1264 aa8.42□□□□□ -1.06
GABRB3-221ENST00000636690 FSD1Q9BTV5 496 aa8.42□□□□□ -1.06
GABRB3-221ENST00000636690 UPF3BQ9BZI7 483 aaKnown RBP8.42□□□□□ -1.06
GABRB3-221ENST00000636690 GZF1Q9H116 711 aaPredicted RBP8.42□□□□□ -1.06
GABRB3-221ENST00000636690 PDRG1Q9NUG6 133 aa8.42□□□□□ -1.06
GABRB3-221ENST00000636690 RBM8AQ9Y5S9 174 aaKnown RBP8.42□□□□□ -1.06
GABRB3-221ENST00000636690 U3KPZ7 1027 aaPredicted RBP8.42□□□□□ -1.06
GABRB3-221ENST00000636690 DISP2A7MBM2 1401 aa8.42□□□□□ -1.06
GABRB3-221ENST00000636690 AHDC1Q5TGY3 1603 aaPredicted RBP8.42□□□□□ -1.06
GABRB3-221ENST00000636690 CICQ96RK0 1608 aaPredicted RBP8.41□□□□□ -1.06
GABRB3-221ENST00000636690 ZNF609O15014 1411 aa8.41□□□□□ -1.06
GABRB3-221ENST00000636690 CDHR2Q9BYE9 1310 aa8.41□□□□□ -1.06
GABRB3-221ENST00000636690 ZSCAN22P10073 491 aaPredicted RBP8.41□□□□□ -1.06
GABRB3-221ENST00000636690 CASTP20810 708 aaKnown RBP8.41□□□□□ -1.06
GABRB3-221ENST00000636690 NASPP49321 788 aaPredicted RBP8.41□□□□□ -1.06
GABRB3-221ENST00000636690 NMIQ13287 307 aaPredicted RBP8.41□□□□□ -1.06
GABRB3-221ENST00000636690 ZSCAN23Q3MJ62 389 aa8.41□□□□□ -1.06
GABRB3-221ENST00000636690 LRSAM1Q6UWE0 723 aa8.41□□□□□ -1.06
GABRB3-221ENST00000636690 UBE3BQ7Z3V4 1068 aa8.41□□□□□ -1.06
GABRB3-221ENST00000636690 RASEFQ8IZ41 740 aa8.41□□□□□ -1.06
GABRB3-221ENST00000636690 PIAS4Q8N2W9 510 aaPredicted RBP8.41□□□□□ -1.06
GABRB3-221ENST00000636690 KBTBD3Q8NAB2 608 aa8.41□□□□□ -1.06
GABRB3-221ENST00000636690 CABLES1Q8TDN4 633 aa8.41□□□□□ -1.06
GABRB3-221ENST00000636690 ISCA1Q9BUE6 129 aa8.41□□□□□ -1.06
GABRB3-221ENST00000636690 DSCC1Q9BVC3 393 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms