RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 COL24A1Q17RW2 1714 aa13.45□□□□□ -0.26
CLN5-213ENST00000636681 DDX60Q8IY21 1712 aaKnown RBP13.45□□□□□ -0.26
CLN5-213ENST00000636681 SUSD4Q5VX71 490 aa13.45□□□□□ -0.26
CLN5-213ENST00000636681 NIP7Q9Y221 180 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLN5-213ENST00000636681 EPHA10Q5JZY3 1008 aa13.44□□□□□ -0.26
CLN5-213ENST00000636681 UBE3BQ7Z3V4 1068 aa13.44□□□□□ -0.26
CLN5-213ENST00000636681 FAM89AQ96GI7 184 aa13.44□□□□□ -0.26
CLN5-213ENST00000636681 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
CLN5-213ENST00000636681 LRRFIP2Q9Y608 721 aaKnown RBP13.44□□□□□ -0.26
CLN5-213ENST00000636681 LAMB2P55268 1798 aa13.44□□□□□ -0.26
CLN5-213ENST00000636681 MYH3P11055 1940 aa13.44□□□□□ -0.26
CLN5-213ENST00000636681 ALDH1L1O75891 902 aa13.43□□□□□ -0.26
CLN5-213ENST00000636681 CASP7P55210 303 aa13.43□□□□□ -0.26
CLN5-213ENST00000636681 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
CLN5-213ENST00000636681 NUTM1Q86Y26 1132 aa13.43□□□□□ -0.26
CLN5-213ENST00000636681 SUCLG2Q96I99 432 aa13.43□□□□□ -0.26
CLN5-213ENST00000636681 CWC25Q9NXE8 425 aaPredicted RBP13.43□□□□□ -0.26
CLN5-213ENST00000636681 C9orf78Q9NZ63 289 aaPredicted RBP13.43□□□□□ -0.26
CLN5-213ENST00000636681 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
CLN5-213ENST00000636681 GRM8O00222 908 aa13.43□□□□□ -0.26
CLN5-213ENST00000636681 ADRA2BP18089 450 aa13.43□□□□□ -0.26
CLN5-213ENST00000636681 NFIXQ14938 502 aa13.43□□□□□ -0.26
CLN5-213ENST00000636681 R3HDM1Q15032 1099 aaKnown RBP13.42□□□□□ -0.26
CLN5-213ENST00000636681 SIRT2Q8IXJ6 389 aa13.42□□□□□ -0.26
CLN5-213ENST00000636681 CCDC191Q8NCU4 936 aa13.42□□□□□ -0.26
CLN5-213ENST00000636681 H7C1W4 665 aa13.41□□□□□ -0.26
CLN5-213ENST00000636681 DDR1Q08345 913 aa13.41□□□□□ -0.26
CLN5-213ENST00000636681 COL4A1P02462 1669 aa13.41□□□□□ -0.26
CLN5-213ENST00000636681 TNRC6CQ9HCJ0 1690 aaKnown RBP13.41□□□□□ -0.26
CLN5-213ENST00000636681 NTSR2O95665 410 aa13.4□□□□□ -0.26
CLN5-213ENST00000636681 IGHDP01880 384 aa13.4□□□□□ -0.26
CLN5-213ENST00000636681 UBTFL1P0CB47 393 aaPredicted RBP13.4□□□□□ -0.26
CLN5-213ENST00000636681 TRIM28Q13263 835 aaKnown RBP13.4□□□□□ -0.26
CLN5-213ENST00000636681 CLEC4GQ6UXB4 293 aa13.4□□□□□ -0.26
CLN5-213ENST00000636681 TRMT112Q9UI30 125 aaKnown RBP13.4□□□□□ -0.26
CLN5-213ENST00000636681 SRCAPQ6ZRS2 3230 aa13.4□□□□□ -0.26
CLN5-213ENST00000636681 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
CLN5-213ENST00000636681 HCLS1P14317 486 aaPredicted RBP13.4□□□□□ -0.26
CLN5-213ENST00000636681 ERFEQ4G0M1 354 aa13.4□□□□□ -0.26
CLN5-213ENST00000636681 HSP90AB3PQ58FF7 597 aa13.4□□□□□ -0.26
CLN5-213ENST00000636681 C3orf67Q6ZVT6 689 aa13.4□□□□□ -0.26
CLN5-213ENST00000636681 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
CLN5-213ENST00000636681 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
CLN5-213ENST00000636681 UTYO14607 1347 aa13.4□□□□□ -0.27
CLN5-213ENST00000636681 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
CLN5-213ENST00000636681 PNMA6EA0A0J9YXQ4 647 aa13.39□□□□□ -0.27
CLN5-213ENST00000636681 TM4SF1P30408 202 aa13.39□□□□□ -0.27
CLN5-213ENST00000636681 ANKRD44Q8N8A2 993 aa13.39□□□□□ -0.27
CLN5-213ENST00000636681 BICC1Q9H694 974 aaKnown RBP13.39□□□□□ -0.27
CLN5-213ENST00000636681 ABCC12Q96J65 1359 aa13.39□□□□□ -0.27
CLN5-213ENST00000636681 GOLGB1Q14789 3259 aaKnown RBP13.38□□□□□ -0.27
CLN5-213ENST00000636681 GNAI2P04899 355 aa13.38□□□□□ -0.27
CLN5-213ENST00000636681 GNAI3P08754 354 aa13.38□□□□□ -0.27
CLN5-213ENST00000636681 CEP85Q6P2H3 762 aa13.38□□□□□ -0.27
CLN5-213ENST00000636681 SETDB2Q96T68 719 aa13.38□□□□□ -0.27
CLN5-213ENST00000636681 CARMIL3Q8ND23 1372 aa13.38□□□□□ -0.27
CLN5-213ENST00000636681 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
CLN5-213ENST00000636681 PCCAP05165 728 aaPredicted RBP13.37□□□□□ -0.27
CLN5-213ENST00000636681 FOXO4P98177 505 aa13.37□□□□□ -0.27
CLN5-213ENST00000636681 SKAP1Q86WV1 359 aa13.37□□□□□ -0.27
CLN5-213ENST00000636681 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
CLN5-213ENST00000636681 UTP14AQ9BVJ6 771 aaKnown RBP13.37□□□□□ -0.27
CLN5-213ENST00000636681 NRXN2Q9P2S2 1712 aa13.37□□□□□ -0.27
CLN5-213ENST00000636681 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
CLN5-213ENST00000636681 IRS4O14654 1257 aaPredicted RBP13.37□□□□□ -0.27
CLN5-213ENST00000636681 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
CLN5-213ENST00000636681 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
CLN5-213ENST00000636681 KLHDC4Q8TBB5 520 aa13.37□□□□□ -0.27
CLN5-213ENST00000636681 PPP4R2Q9NY27 417 aa13.37□□□□□ -0.27
CLN5-213ENST00000636681 SERPINB2P05120 415 aa13.36□□□□□ -0.27
CLN5-213ENST00000636681 MMP10P09238 476 aa13.36□□□□□ -0.27
CLN5-213ENST00000636681 PARP10Q53GL7 1025 aa13.36□□□□□ -0.27
CLN5-213ENST00000636681 LMBR1LQ6UX01 489 aa13.35□□□□□ -0.27
CLN5-213ENST00000636681 PPP1R42Q7Z4L9 355 aa13.35□□□□□ -0.27
CLN5-213ENST00000636681 CCDC136Q96JN2 1154 aa13.35□□□□□ -0.27
CLN5-213ENST00000636681 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
CLN5-213ENST00000636681 CACNA1SQ13698 1873 aa13.35□□□□□ -0.27
CLN5-213ENST00000636681 SH3TC1Q8TE82 1336 aa13.35□□□□□ -0.27
CLN5-213ENST00000636681 PRR5LQ6MZQ0 368 aa13.35□□□□□ -0.27
CLN5-213ENST00000636681 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
CLN5-213ENST00000636681 PA2G4Q9UQ80 394 aaKnown RBP13.35□□□□□ -0.27
CLN5-213ENST00000636681 CDHR2Q9BYE9 1310 aa13.34□□□□□ -0.27
CLN5-213ENST00000636681 ATP8B2P98198 1209 aa13.34□□□□□ -0.27
CLN5-213ENST00000636681 NLGN1Q8N2Q7 840 aa13.34□□□□□ -0.27
CLN5-213ENST00000636681 ZNF594Q96JF6 807 aaPredicted RBP13.34□□□□□ -0.27
CLN5-213ENST00000636681 CHMP3Q9Y3E7 222 aa13.34□□□□□ -0.27
CLN5-213ENST00000636681 COL11A2P13942 1736 aaPredicted RBP13.34□□□□□ -0.27
CLN5-213ENST00000636681 IBTKQ9P2D0 1353 aaPredicted RBP13.33□□□□□ -0.27
CLN5-213ENST00000636681 RGL2O15211 777 aa13.33□□□□□ -0.28
CLN5-213ENST00000636681 GTF2E1P29083 439 aaPredicted RBP13.33□□□□□ -0.28
CLN5-213ENST00000636681 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
CLN5-213ENST00000636681 SRGAP3O43295 1099 aa13.32□□□□□ -0.28
CLN5-213ENST00000636681 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
CLN5-213ENST00000636681 ERICH6BQ5W0A0 696 aa13.32□□□□□ -0.28
CLN5-213ENST00000636681 CNBD1Q8NA66 436 aa13.32□□□□□ -0.28
CLN5-213ENST00000636681 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
CLN5-213ENST00000636681 BCL11AQ9H165 835 aa13.32□□□□□ -0.28
CLN5-213ENST00000636681 GREM2Q9H772 168 aa13.32□□□□□ -0.28
CLN5-213ENST00000636681 APBB1O00213 710 aa13.32□□□□□ -0.28
CLN5-213ENST00000636681 PDE8AO60658 829 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms