RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 RNF123Q5XPI4 1314 aa19.68■□□□□ 0.74
CTSD-207ENST00000636571 IPO8O15397 1037 aaKnown RBP19.67■□□□□ 0.74
CTSD-207ENST00000636571 NTSR2O95665 410 aa19.67■□□□□ 0.74
CTSD-207ENST00000636571 POLD1P28340 1107 aa19.67■□□□□ 0.74
CTSD-207ENST00000636571 C20orf194Q5TEA3 1177 aa19.67■□□□□ 0.74
CTSD-207ENST00000636571 NBPF5PQ86XG9 351 aaPredicted RBP19.67■□□□□ 0.74
CTSD-207ENST00000636571 ABCC4O15439 1325 aa19.67■□□□□ 0.74
CTSD-207ENST00000636571 PRR5LQ6MZQ0 368 aa19.67■□□□□ 0.74
CTSD-207ENST00000636571 LINS1Q8NG48 757 aa19.67■□□□□ 0.74
CTSD-207ENST00000636571 PANK1Q8TE04 598 aa19.67■□□□□ 0.74
CTSD-207ENST00000636571 NEFLP07196 543 aa19.66■□□□□ 0.74
CTSD-207ENST00000636571 ANKRD31Q8N7Z5 1873 aa19.66■□□□□ 0.74
CTSD-207ENST00000636571 FAM89AQ96GI7 184 aa19.66■□□□□ 0.74
CTSD-207ENST00000636571 GTF3C3Q9Y5Q9 886 aa19.66■□□□□ 0.74
CTSD-207ENST00000636571 PXDNLA1KZ92 1463 aa19.66■□□□□ 0.74
CTSD-207ENST00000636571 ABCC12Q96J65 1359 aa19.66■□□□□ 0.74
CTSD-207ENST00000636571 TRIM28Q13263 835 aaKnown RBP19.65■□□□□ 0.74
CTSD-207ENST00000636571 ERFEQ4G0M1 354 aa19.65■□□□□ 0.74
CTSD-207ENST00000636571 PARP10Q53GL7 1025 aa19.65■□□□□ 0.74
CTSD-207ENST00000636571 TMEM57Q8N5G2 664 aa19.65■□□□□ 0.74
CTSD-207ENST00000636571 CWC25Q9NXE8 425 aaPredicted RBP19.65■□□□□ 0.74
CTSD-207ENST00000636571 GCKRQ14397 625 aa19.65■□□□□ 0.74
CTSD-207ENST00000636571 CNBD1Q8NA66 436 aa19.65■□□□□ 0.74
CTSD-207ENST00000636571 CCDC191Q8NCU4 936 aa19.65■□□□□ 0.74
CTSD-207ENST00000636571 UTP14AQ9BVJ6 771 aaKnown RBP19.65■□□□□ 0.74
CTSD-207ENST00000636571 SRCIN1Q9C0H9 1055 aa19.65■□□□□ 0.74
CTSD-207ENST00000636571 TRMT112Q9UI30 125 aaKnown RBP19.65■□□□□ 0.74
CTSD-207ENST00000636571 TNRC6CQ9HCJ0 1690 aaKnown RBP19.65■□□□□ 0.74
CTSD-207ENST00000636571 DZIP1LQ8IYY4 767 aaKnown RBP19.64■□□□□ 0.73
CTSD-207ENST00000636571 KLHL34Q8N239 644 aa19.64■□□□□ 0.73
CTSD-207ENST00000636571 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.64■□□□□ 0.73
CTSD-207ENST00000636571 NPHP1O15259 732 aa19.63■□□□□ 0.73
CTSD-207ENST00000636571 PPP1R42Q7Z4L9 355 aa19.63■□□□□ 0.73
CTSD-207ENST00000636571 PPP1R1BQ9UD71 204 aaPredicted RBP19.63■□□□□ 0.73
CTSD-207ENST00000636571 DDX60Q8IY21 1712 aaKnown RBP19.63■□□□□ 0.73
CTSD-207ENST00000636571 TPTE2Q6XPS3 522 aa19.62■□□□□ 0.73
CTSD-207ENST00000636571 FTSJ3Q8IY81 847 aaKnown RBP19.62■□□□□ 0.73
CTSD-207ENST00000636571 C3orf67Q6ZVT6 689 aa19.62■□□□□ 0.73
CTSD-207ENST00000636571 UBE3BQ7Z3V4 1068 aa19.62■□□□□ 0.73
CTSD-207ENST00000636571 HCLS1P14317 486 aaPredicted RBP19.61■□□□□ 0.73
CTSD-207ENST00000636571 GTF2E1P29083 439 aaPredicted RBP19.61■□□□□ 0.73
CTSD-207ENST00000636571 INTS3Q68E01 1043 aaKnown RBP19.61■□□□□ 0.73
CTSD-207ENST00000636571 C10orf71Q711Q0 1435 aa19.61■□□□□ 0.73
CTSD-207ENST00000636571 LRP5O75197 1615 aa19.61■□□□□ 0.73
CTSD-207ENST00000636571 KIF13BQ9NQT8 1826 aa19.61■□□□□ 0.73
CTSD-207ENST00000636571 ALDH1L1O75891 902 aa19.6■□□□□ 0.73
CTSD-207ENST00000636571 NBPF7P0C2Y1 421 aaPredicted RBP19.6■□□□□ 0.73
CTSD-207ENST00000636571 CCT4P50991 539 aaKnown RBP19.6■□□□□ 0.73
CTSD-207ENST00000636571 ZBTB38Q8NAP3 1195 aaPredicted RBP19.6■□□□□ 0.73
CTSD-207ENST00000636571 NYXQ9GZU5 481 aa19.6■□□□□ 0.73
CTSD-207ENST00000636571 SH3TC1Q8TE82 1336 aa19.6■□□□□ 0.73
CTSD-207ENST00000636571 IBTKQ9P2D0 1353 aaPredicted RBP19.6■□□□□ 0.73
CTSD-207ENST00000636571 LAMB2P55268 1798 aa19.6■□□□□ 0.73
CTSD-207ENST00000636571 CASP7P55210 303 aa19.6■□□□□ 0.73
CTSD-207ENST00000636571 USP44Q9H0E7 712 aa19.6■□□□□ 0.73
CTSD-207ENST00000636571 COL11A2P13942 1736 aaPredicted RBP19.59■□□□□ 0.73
CTSD-207ENST00000636571 H7C1W4 665 aa19.59■□□□□ 0.73
CTSD-207ENST00000636571 GRM8O00222 908 aa19.59■□□□□ 0.73
CTSD-207ENST00000636571 PCCAP05165 728 aaPredicted RBP19.59■□□□□ 0.73
CTSD-207ENST00000636571 ITPRIPQ8IWB1 547 aa19.59■□□□□ 0.73
CTSD-207ENST00000636571 COG6Q9Y2V7 657 aa19.59■□□□□ 0.73
CTSD-207ENST00000636571 KIAA1551Q9HCM1 1747 aa19.59■□□□□ 0.73
CTSD-207ENST00000636571 ST5P78524 1137 aa19.58■□□□□ 0.73
CTSD-207ENST00000636571 MEIS3Q99687 375 aa19.58■□□□□ 0.73
CTSD-207ENST00000636571 FHDC1Q9C0D6 1143 aaPredicted RBP19.58■□□□□ 0.73
CTSD-207ENST00000636571 C9orf78Q9NZ63 289 aaPredicted RBP19.58■□□□□ 0.73
CTSD-207ENST00000636571 IRS4O14654 1257 aaPredicted RBP19.57■□□□□ 0.72
CTSD-207ENST00000636571 CHRNA5P30532 468 aa19.57■□□□□ 0.72
CTSD-207ENST00000636571 NLGN2Q8NFZ4 835 aa19.57■□□□□ 0.72
CTSD-207ENST00000636571 CRBNQ96SW2 442 aa19.57■□□□□ 0.72
CTSD-207ENST00000636571 TAF1P21675 1872 aa19.56■□□□□ 0.72
CTSD-207ENST00000636571 WWC3Q9ULE0 1092 aa19.56■□□□□ 0.72
CTSD-207ENST00000636571 UTRNP46939 3433 aa19.56■□□□□ 0.72
CTSD-207ENST00000636571 MYH3P11055 1940 aa19.55■□□□□ 0.72
CTSD-207ENST00000636571 EPHA10Q5JZY3 1008 aa19.55■□□□□ 0.72
CTSD-207ENST00000636571 SUCLG2Q96I99 432 aa19.55■□□□□ 0.72
CTSD-207ENST00000636571 CCDC85AQ96PX6 553 aaPredicted RBP19.55■□□□□ 0.72
CTSD-207ENST00000636571 A0A0G2JLW4 131 aa19.55■□□□□ 0.72
CTSD-207ENST00000636571 SLC10A5Q5PT55 438 aa19.55■□□□□ 0.72
CTSD-207ENST00000636571 EXOC6Q8TAG9 804 aa19.55■□□□□ 0.72
CTSD-207ENST00000636571 KAZALD1Q96I82 304 aa19.55■□□□□ 0.72
CTSD-207ENST00000636571 BRIP1Q9BX63 1249 aa19.55■□□□□ 0.72
CTSD-207ENST00000636571 COL4A1P02462 1669 aa19.54■□□□□ 0.72
CTSD-207ENST00000636571 UTYO14607 1347 aa19.54■□□□□ 0.72
CTSD-207ENST00000636571 CDHR2Q9BYE9 1310 aa19.54■□□□□ 0.72
CTSD-207ENST00000636571 PDE3AQ14432 1141 aa19.54■□□□□ 0.72
CTSD-207ENST00000636571 MVPQ14764 893 aaKnown RBP19.54■□□□□ 0.72
CTSD-207ENST00000636571 CACNA1SQ13698 1873 aa19.53■□□□□ 0.72
CTSD-207ENST00000636571 DPEP1P16444 411 aa19.52■□□□□ 0.72
CTSD-207ENST00000636571 C1orf115Q9H7X2 142 aa19.52■□□□□ 0.72
CTSD-207ENST00000636571 ZBTB7BO15156 539 aaPredicted RBP19.52■□□□□ 0.71
CTSD-207ENST00000636571 C2CD5Q86YS7 1000 aa19.52■□□□□ 0.71
CTSD-207ENST00000636571 SYT17Q9BSW7 474 aa19.52■□□□□ 0.71
CTSD-207ENST00000636571 CD2APQ9Y5K6 639 aa19.52■□□□□ 0.71
CTSD-207ENST00000636571 RIC1Q4ADV7 1423 aa19.51■□□□□ 0.71
CTSD-207ENST00000636571 PDE8AO60658 829 aa19.51■□□□□ 0.71
CTSD-207ENST00000636571 MS4A1P11836 297 aa19.51■□□□□ 0.71
CTSD-207ENST00000636571 FOXO4P98177 505 aa19.51■□□□□ 0.71
CTSD-207ENST00000636571 SLC51AQ86UW1 340 aa19.51■□□□□ 0.71
CTSD-207ENST00000636571 NLRP3Q96P20 1036 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms