RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 TMEM132AQ24JP5 1023 aa16.55■□□□□ 0.24
GABRB3-219ENST00000636466 HSP90AA4PQ58FG1 418 aa16.55■□□□□ 0.24
GABRB3-219ENST00000636466 PTPRTO14522 1441 aa16.55■□□□□ 0.24
GABRB3-219ENST00000636466 SPATA31E1Q6ZUB1 1445 aa16.55■□□□□ 0.24
GABRB3-219ENST00000636466 IARSP41252 1262 aaKnown RBP16.55■□□□□ 0.24
GABRB3-219ENST00000636466 DACH1Q9UI36 760 aa16.55■□□□□ 0.24
GABRB3-219ENST00000636466 KLF18A0A0U1RQI7 1052 aa16.54■□□□□ 0.24
GABRB3-219ENST00000636466 ZNF830Q96NB3 372 aaPredicted RBP16.54■□□□□ 0.24
GABRB3-219ENST00000636466 SFPQP23246 707 aaKnown RBP eCLIP16.54■□□□□ 0.24
GABRB3-219ENST00000636466 ZNF165P49910 485 aa16.54■□□□□ 0.24
GABRB3-219ENST00000636466 ATP2B3Q16720 1220 aa16.54■□□□□ 0.24
GABRB3-219ENST00000636466 KLHL40Q2TBA0 621 aa16.54■□□□□ 0.24
GABRB3-219ENST00000636466 NMIQ13287 307 aaPredicted RBP16.54■□□□□ 0.24
GABRB3-219ENST00000636466 IP6K1Q92551 441 aa16.54■□□□□ 0.24
GABRB3-219ENST00000636466 MSH6P52701 1360 aa16.54■□□□□ 0.24
GABRB3-219ENST00000636466 EIF5P55010 431 aaKnown RBP16.53■□□□□ 0.24
GABRB3-219ENST00000636466 ZNF444Q8N0Y2 327 aaPredicted RBP16.53■□□□□ 0.24
GABRB3-219ENST00000636466 CRACR2BQ8N4Y2 399 aaPredicted RBP16.53■□□□□ 0.24
GABRB3-219ENST00000636466 SF3B2Q13435 895 aaKnown RBP16.53■□□□□ 0.24
GABRB3-219ENST00000636466 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 SLC26A6Q9BXS9 759 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 TMX1Q9H3N1 280 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 ANO10Q9NW15 660 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.24
GABRB3-219ENST00000636466 DNM1Q05193 864 aaKnown RBP16.53■□□□□ 0.24
GABRB3-219ENST00000636466 SBNO2Q9Y2G9 1366 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 MBD5Q9P267 1494 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 ATP7AQ04656 1500 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 SAMD9Q5K651 1589 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 CCDC196A0A1B0GTZ2 297 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 ZNF76P36508 570 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 ENOX2Q16206 610 aaKnown RBP16.53■□□□□ 0.24
GABRB3-219ENST00000636466 ZSCAN23Q3MJ62 389 aa16.53■□□□□ 0.24
GABRB3-219ENST00000636466 C16orf45Q96MC5 204 aaPredicted RBP16.53■□□□□ 0.24
GABRB3-219ENST00000636466 CNNM3Q8NE01 707 aa16.52■□□□□ 0.24
GABRB3-219ENST00000636466 WWC3Q9ULE0 1092 aa16.52■□□□□ 0.24
GABRB3-219ENST00000636466 ADCY5O95622 1261 aa16.52■□□□□ 0.24
GABRB3-219ENST00000636466 TIMM10P62072 90 aa16.52■□□□□ 0.24
GABRB3-219ENST00000636466 SLC9C2Q5TAH2 1124 aa16.52■□□□□ 0.24
GABRB3-219ENST00000636466 CLIP2Q9UDT6 1046 aa16.52■□□□□ 0.24
GABRB3-219ENST00000636466 STX8Q9UNK0 236 aa16.52■□□□□ 0.24
GABRB3-219ENST00000636466 ALDH1L1O75891 902 aa16.52■□□□□ 0.23
GABRB3-219ENST00000636466 CHL1O00533 1208 aa16.51■□□□□ 0.23
GABRB3-219ENST00000636466 RNMTO43148 476 aaKnown RBP16.51■□□□□ 0.23
GABRB3-219ENST00000636466 NBPF7P0C2Y1 421 aaPredicted RBP16.51■□□□□ 0.23
GABRB3-219ENST00000636466 ZSCAN22P10073 491 aaPredicted RBP16.51■□□□□ 0.23
GABRB3-219ENST00000636466 NDUFB9Q9Y6M9 179 aa16.51■□□□□ 0.23
GABRB3-219ENST00000636466 YEATS2Q9ULM3 1422 aa16.51■□□□□ 0.23
GABRB3-219ENST00000636466 PNMA6EA0A0J9YXQ4 647 aa16.51■□□□□ 0.23
GABRB3-219ENST00000636466 NLRP5P59047 1200 aa16.51■□□□□ 0.23
GABRB3-219ENST00000636466 USP48Q86UV5 1035 aa16.51■□□□□ 0.23
GABRB3-219ENST00000636466 BMP2KQ9NSY1 1161 aaPredicted RBP16.51■□□□□ 0.23
GABRB3-219ENST00000636466 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
GABRB3-219ENST00000636466 SMTNL1A8MU46 457 aa16.51■□□□□ 0.23
GABRB3-219ENST00000636466 METAP2P50579 478 aaKnown RBP eCLIP16.51■□□□□ 0.23
GABRB3-219ENST00000636466 JAG2Q9Y219 1238 aa16.51■□□□□ 0.23
GABRB3-219ENST00000636466 TSPY2A6NKD2 308 aa16.51■□□□□ 0.23
GABRB3-219ENST00000636466 SSRP1Q08945 709 aaKnown RBP16.51■□□□□ 0.23
GABRB3-219ENST00000636466 AXDND1Q5T1B0 1012 aaPredicted RBP16.51■□□□□ 0.23
GABRB3-219ENST00000636466 PDCL3Q9H2J4 239 aa16.51■□□□□ 0.23
GABRB3-219ENST00000636466 BICC1Q9H694 974 aaKnown RBP16.51■□□□□ 0.23
GABRB3-219ENST00000636466 CBFA2T2O43439 604 aa16.5■□□□□ 0.23
GABRB3-219ENST00000636466 MFSD6Q6ZSS7 791 aa16.5■□□□□ 0.23
GABRB3-219ENST00000636466 Q6ZUG5 572 aa16.5■□□□□ 0.23
GABRB3-219ENST00000636466 NCOA7Q8NI08 942 aa16.5■□□□□ 0.23
GABRB3-219ENST00000636466 ATP6V1AP38606 617 aa16.5■□□□□ 0.23
GABRB3-219ENST00000636466 AK2P54819 239 aa16.5■□□□□ 0.23
GABRB3-219ENST00000636466 TFCP2Q12800 502 aa16.5■□□□□ 0.23
GABRB3-219ENST00000636466 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
GABRB3-219ENST00000636466 RPGRQ92834 1020 aaKnown RBP16.5■□□□□ 0.23
GABRB3-219ENST00000636466 FAM89AQ96GI7 184 aa16.5■□□□□ 0.23
GABRB3-219ENST00000636466 ARHGAP29Q52LW3 1261 aa16.5■□□□□ 0.23
GABRB3-219ENST00000636466 CDC5LQ99459 802 aaKnown RBP16.5■□□□□ 0.23
GABRB3-219ENST00000636466 TEX13AQ9BXU3 409 aaPredicted RBP16.5■□□□□ 0.23
GABRB3-219ENST00000636466 SEPT11Q9NVA2 429 aaKnown RBP16.5■□□□□ 0.23
GABRB3-219ENST00000636466 KCNQ3O43525 872 aa16.49■□□□□ 0.23
GABRB3-219ENST00000636466 PDIA4P13667 645 aaKnown RBP16.49■□□□□ 0.23
GABRB3-219ENST00000636466 CHMLP26374 656 aa16.49■□□□□ 0.23
GABRB3-219ENST00000636466 AK7Q96M32 723 aa16.49■□□□□ 0.23
GABRB3-219ENST00000636466 UBE2HP62256 183 aa16.49■□□□□ 0.23
GABRB3-219ENST00000636466 RXRAP19793 462 aa16.49■□□□□ 0.23
GABRB3-219ENST00000636466 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
GABRB3-219ENST00000636466 SEC63Q9UGP8 760 aaKnown RBP16.49■□□□□ 0.23
GABRB3-219ENST00000636466 EPB41L2O43491 1005 aaKnown RBP16.49■□□□□ 0.23
GABRB3-219ENST00000636466 IL2RBP14784 551 aa16.49■□□□□ 0.23
GABRB3-219ENST00000636466 NBPF5PQ86XG9 351 aaPredicted RBP16.49■□□□□ 0.23
GABRB3-219ENST00000636466 ACBD3Q9H3P7 528 aa16.49■□□□□ 0.23
GABRB3-219ENST00000636466 NIP7Q9Y221 180 aaKnown RBP eCLIP16.49■□□□□ 0.23
GABRB3-219ENST00000636466 SOS1Q07889 1333 aaPredicted RBP16.49■□□□□ 0.23
GABRB3-219ENST00000636466 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 CCDC194A0A1B0GVG4 234 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 CCP110O43303 1012 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 DNA2P51530 1060 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 PTPN14Q15678 1187 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 MCMDC2Q4G0Z9 681 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 CATIPQ7Z7H3 387 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 SIRT1Q96EB6 747 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 MAP7D2Q96T17 732 aa16.48■□□□□ 0.23
GABRB3-219ENST00000636466 RNF41Q9H4P4 317 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms