RNA–Protein interactions for RNA: ENST00000636257.1

SPTAN1-230, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-230ENST00000636257 CDCA8Q53HL2 280 aa17.11■□□□□ 0.33
SPTAN1-230ENST00000636257 RBBP6Q7Z6E9 1792 aaKnown RBP17.1■□□□□ 0.33
SPTAN1-230ENST00000636257 POLR2AP24928 1970 aaKnown RBP17.09■□□□□ 0.33
SPTAN1-230ENST00000636257 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
SPTAN1-230ENST00000636257 GRIPAP1Q4V328 841 aa17.09■□□□□ 0.33
SPTAN1-230ENST00000636257 SULT6B1Q6IMI4 303 aa17.09■□□□□ 0.33
SPTAN1-230ENST00000636257 NIM1KQ8IY84 436 aa17.09■□□□□ 0.33
SPTAN1-230ENST00000636257 CSRNP1Q96S65 589 aa17.09■□□□□ 0.33
SPTAN1-230ENST00000636257 TEX13AQ9BXU3 409 aaPredicted RBP17.09■□□□□ 0.33
SPTAN1-230ENST00000636257 CDHR2Q9BYE9 1310 aa17.09■□□□□ 0.33
SPTAN1-230ENST00000636257 HTTP42858 3142 aa17.08■□□□□ 0.33
SPTAN1-230ENST00000636257 HEG1Q9ULI3 1381 aa17.08■□□□□ 0.32
SPTAN1-230ENST00000636257 HIRAP54198 1017 aaPredicted RBP17.08■□□□□ 0.32
SPTAN1-230ENST00000636257 CLEC4GQ6UXB4 293 aa17.08■□□□□ 0.32
SPTAN1-230ENST00000636257 TPTE2Q6XPS3 522 aa17.08■□□□□ 0.32
SPTAN1-230ENST00000636257 NPM2Q86SE8 214 aaKnown RBP17.08■□□□□ 0.32
SPTAN1-230ENST00000636257 DZIP3Q86Y13 1208 aaKnown RBP17.08■□□□□ 0.32
SPTAN1-230ENST00000636257 TRIOBPQ9H2D6 2365 aa17.08■□□□□ 0.32
SPTAN1-230ENST00000636257 NPC1L1Q9UHC9 1359 aa17.07■□□□□ 0.32
SPTAN1-230ENST00000636257 ZNF157P51786 506 aaPredicted RBP17.07■□□□□ 0.32
SPTAN1-230ENST00000636257 TTC5Q8N0Z6 440 aa17.07■□□□□ 0.32
SPTAN1-230ENST00000636257 HDAC9Q9UKV0 1011 aa17.07■□□□□ 0.32
SPTAN1-230ENST00000636257 SLC10A3P09131 477 aa17.06■□□□□ 0.32
SPTAN1-230ENST00000636257 GMPSP49915 693 aaPredicted RBP17.06■□□□□ 0.32
SPTAN1-230ENST00000636257 FBXO46Q6PJ61 603 aaPredicted RBP17.06■□□□□ 0.32
SPTAN1-230ENST00000636257 REM2Q8IYK8 340 aaPredicted RBP17.06■□□□□ 0.32
SPTAN1-230ENST00000636257 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
SPTAN1-230ENST00000636257 GBA2Q9HCG7 927 aaPredicted RBP17.06■□□□□ 0.32
SPTAN1-230ENST00000636257 SIPA1L3O60292 1781 aaPredicted RBP17.06■□□□□ 0.32
SPTAN1-230ENST00000636257 PAPPA2Q9BXP8 1791 aa17.05■□□□□ 0.32
SPTAN1-230ENST00000636257 CRY2Q49AN0 593 aa17.05■□□□□ 0.32
SPTAN1-230ENST00000636257 USP48Q86UV5 1035 aa17.05■□□□□ 0.32
SPTAN1-230ENST00000636257 C2orf69Q8N8R5 385 aa17.05■□□□□ 0.32
SPTAN1-230ENST00000636257 SLC17A8Q8NDX2 589 aa17.05■□□□□ 0.32
SPTAN1-230ENST00000636257 CENPFP49454 3210 aa17.04■□□□□ 0.32
SPTAN1-230ENST00000636257 COL6A3P12111 3177 aa17.04■□□□□ 0.32
SPTAN1-230ENST00000636257 CEP290O15078 2479 aa17.04■□□□□ 0.32
SPTAN1-230ENST00000636257 A1BGP04217 495 aa17.04■□□□□ 0.32
SPTAN1-230ENST00000636257 CXCL9Q07325 125 aa17.04■□□□□ 0.32
SPTAN1-230ENST00000636257 TRPM4Q8TD43 1214 aa17.04■□□□□ 0.32
SPTAN1-230ENST00000636257 ZNF296Q8WUU4 475 aaPredicted RBP17.04■□□□□ 0.32
SPTAN1-230ENST00000636257 COLQQ9Y215 455 aaPredicted RBP17.04■□□□□ 0.32
SPTAN1-230ENST00000636257 ZNF652Q9Y2D9 606 aa17.04■□□□□ 0.32
SPTAN1-230ENST00000636257 PPIP5K2O43314 1243 aa17.03■□□□□ 0.32
SPTAN1-230ENST00000636257 DLK2Q6UY11 383 aa17.03■□□□□ 0.32
SPTAN1-230ENST00000636257 VPS33BQ9H267 617 aa17.02■□□□□ 0.32
SPTAN1-230ENST00000636257 ZNRF3Q9ULT6 936 aa17.02■□□□□ 0.32
SPTAN1-230ENST00000636257 BRCA2P51587 3418 aa17.02■□□□□ 0.32
SPTAN1-230ENST00000636257 KIAA0100Q14667 2235 aaKnown RBP17.01■□□□□ 0.31
SPTAN1-230ENST00000636257 AOC3Q16853 763 aa17.01■□□□□ 0.31
SPTAN1-230ENST00000636257 ZNF790Q6PG37 636 aa17.01■□□□□ 0.31
SPTAN1-230ENST00000636257 NIP7Q9Y221 180 aaKnown RBP eCLIP17.01■□□□□ 0.31
SPTAN1-230ENST00000636257 RIC1Q4ADV7 1423 aa17.01■□□□□ 0.31
SPTAN1-230ENST00000636257 RGL2O15211 777 aa17■□□□□ 0.31
SPTAN1-230ENST00000636257 HOXA10P31260 410 aaPredicted RBP17■□□□□ 0.31
SPTAN1-230ENST00000636257 NOM1Q5C9Z4 860 aaKnown RBP17■□□□□ 0.31
SPTAN1-230ENST00000636257 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
SPTAN1-230ENST00000636257 KRT26Q7Z3Y9 468 aa16.99■□□□□ 0.31
SPTAN1-230ENST00000636257 SLC51AQ86UW1 340 aa16.99■□□□□ 0.31
SPTAN1-230ENST00000636257 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
SPTAN1-230ENST00000636257 POTEFA5A3E0 1075 aa16.98■□□□□ 0.31
SPTAN1-230ENST00000636257 FAM177BA6PVY3 158 aa16.98■□□□□ 0.31
SPTAN1-230ENST00000636257 CNOT7Q9UIV1 285 aaKnown RBP16.98■□□□□ 0.31
SPTAN1-230ENST00000636257 ABCC12Q96J65 1359 aa16.98■□□□□ 0.31
SPTAN1-230ENST00000636257 TBC1D8O95759 1140 aa16.97■□□□□ 0.31
SPTAN1-230ENST00000636257 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
SPTAN1-230ENST00000636257 IL13P35225 146 aa16.97■□□□□ 0.31
SPTAN1-230ENST00000636257 TNIP1Q15025 636 aa16.97■□□□□ 0.31
SPTAN1-230ENST00000636257 INTS3Q68E01 1043 aaKnown RBP16.97■□□□□ 0.31
SPTAN1-230ENST00000636257 RASAL3Q86YV0 1011 aa16.97■□□□□ 0.31
SPTAN1-230ENST00000636257 RPGRQ92834 1020 aaKnown RBP16.97■□□□□ 0.31
SPTAN1-230ENST00000636257 SHTN1A0MZ66 631 aa16.96■□□□□ 0.31
SPTAN1-230ENST00000636257 H7C1D1 291 aa16.96■□□□□ 0.31
SPTAN1-230ENST00000636257 PPEF1O14829 653 aaPredicted RBP16.96■□□□□ 0.31
SPTAN1-230ENST00000636257 FMNL2Q96PY5 1086 aa16.96■□□□□ 0.31
SPTAN1-230ENST00000636257 RANBP2P49792 3224 aaKnown RBP16.96■□□□□ 0.31
SPTAN1-230ENST00000636257 GPR25O00155 361 aa16.95■□□□□ 0.3
SPTAN1-230ENST00000636257 MTHFSDQ2M296 383 aaKnown RBP16.95■□□□□ 0.3
SPTAN1-230ENST00000636257 CRAMP1Q96RY5 1269 aa16.95■□□□□ 0.3
SPTAN1-230ENST00000636257 NUP98P52948 1817 aa16.94■□□□□ 0.3
SPTAN1-230ENST00000636257 ADM5C9JUS6 153 aa16.94■□□□□ 0.3
SPTAN1-230ENST00000636257 RAD17O75943 681 aa16.94■□□□□ 0.3
SPTAN1-230ENST00000636257 PIP4K2AP48426 406 aaPredicted RBP16.94■□□□□ 0.3
SPTAN1-230ENST00000636257 MICALL2Q8IY33 904 aa16.94■□□□□ 0.3
SPTAN1-230ENST00000636257 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
SPTAN1-230ENST00000636257 SUPT20HQ8NEM7 779 aa16.93■□□□□ 0.3
SPTAN1-230ENST00000636257 NYXQ9GZU5 481 aa16.93■□□□□ 0.3
SPTAN1-230ENST00000636257 TCERG1O14776 1098 aaKnown RBP16.92■□□□□ 0.3
SPTAN1-230ENST00000636257 TEFQ10587 303 aa16.92■□□□□ 0.3
SPTAN1-230ENST00000636257 DCPSQ96C86 337 aaKnown RBP16.92■□□□□ 0.3
SPTAN1-230ENST00000636257 FKTNO75072 461 aa16.91■□□□□ 0.3
SPTAN1-230ENST00000636257 KIAA2012Q0VF49 1180 aa16.91■□□□□ 0.3
SPTAN1-230ENST00000636257 SAMD7Q7Z3H4 446 aa16.91■□□□□ 0.3
SPTAN1-230ENST00000636257 NUTM1Q86Y26 1132 aa16.91■□□□□ 0.3
SPTAN1-230ENST00000636257 DPF2Q92785 391 aa16.91■□□□□ 0.3
SPTAN1-230ENST00000636257 OTUD5Q96G74 571 aa16.91■□□□□ 0.3
SPTAN1-230ENST00000636257 RBM17Q96I25 401 aaKnown RBP16.91■□□□□ 0.3
SPTAN1-230ENST00000636257 USP16Q9Y5T5 823 aa16.91■□□□□ 0.3
SPTAN1-230ENST00000636257 MNX1P50219 401 aaPredicted RBP16.9■□□□□ 0.3
SPTAN1-230ENST00000636257 CFHR5Q9BXR6 569 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms