RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 ZNF771Q7L3S4 317 aaPredicted RBP7.53□□□□□ -1.2
PDE4D-228ENST00000636120 LINS1Q8NG48 757 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 RAB34Q9BZG1 259 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 RAD50Q92878 1312 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 MINDY4BA8MYZ0 360 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 SDSP20132 328 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 PDE4BQ07343 736 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 SPC24Q8NBT2 197 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 TNPO1Q92973 898 aaKnown RBP7.53□□□□□ -1.2
PDE4D-228ENST00000636120 KRT23Q9C075 422 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 DCTPP1Q9H773 170 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 CNNM2Q9H8M5 875 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 SPATA31E1Q6ZUB1 1445 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 KIF2AO00139 706 aaPredicted RBP7.53□□□□□ -1.2
PDE4D-228ENST00000636120 GJB2P29033 226 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 ZNF76P36508 570 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 EYA1Q99502 592 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 ESYT1Q9BSJ8 1104 aa7.53□□□□□ -1.2
PDE4D-228ENST00000636120 AOX1Q06278 1338 aa7.52□□□□□ -1.2
PDE4D-228ENST00000636120 IFIT3O14879 490 aaKnown RBP7.52□□□□□ -1.2
PDE4D-228ENST00000636120 STX6O43752 255 aa7.52□□□□□ -1.2
PDE4D-228ENST00000636120 BRPF1P55201 1214 aaPredicted RBP7.52□□□□□ -1.2
PDE4D-228ENST00000636120 CHRNA2Q15822 529 aa7.52□□□□□ -1.2
PDE4D-228ENST00000636120 TMEM132AQ24JP5 1023 aa7.52□□□□□ -1.2
PDE4D-228ENST00000636120 CEP85Q6P2H3 762 aa7.52□□□□□ -1.2
PDE4D-228ENST00000636120 CRACR2BQ8N4Y2 399 aaPredicted RBP7.52□□□□□ -1.2
PDE4D-228ENST00000636120 PCDHB15Q9Y5E8 787 aa7.52□□□□□ -1.2
PDE4D-228ENST00000636120 MPHOSPH10O00566 681 aaKnown RBP7.52□□□□□ -1.21
PDE4D-228ENST00000636120 CAVIN2O95810 425 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 GCP02774 474 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 KCNA6P17658 529 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 ZBTB40Q9NUA8 1239 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 RTL1A6NKG5 1358 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 FGFR1OPO95684 399 aaKnown RBP7.52□□□□□ -1.21
PDE4D-228ENST00000636120 TMTC2Q8N394 836 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 DEF6Q9H4E7 631 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 ATP5J2-PTCD1G3V325 749 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 GPTP24298 496 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 MCM5P33992 734 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 TMEM266Q2M3C6 531 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 MCMDC2Q4G0Z9 681 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 MFSD6Q6ZSS7 791 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 COPS6Q7L5N1 327 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 ZNF397Q8NF99 534 aaPredicted RBP7.52□□□□□ -1.21
PDE4D-228ENST00000636120 CRNKL1Q9BZJ0 848 aaKnown RBP7.52□□□□□ -1.21
PDE4D-228ENST00000636120 ZRANB1Q9UGI0 708 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 SYCE3A1L190 88 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 RFC4P35249 363 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 MAP3K19Q56UN5 1328 aa7.52□□□□□ -1.21
PDE4D-228ENST00000636120 KANK3Q6NY19 840 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 TSG101Q99816 390 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 NCKAP5LQ9HCH0 1330 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 PLEKHG1Q9ULL1 1385 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 ERLIN2O94905 339 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 GNAT2P19087 354 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 UVSSAQ2YD98 709 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 CUL5Q93034 780 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 UTP14AQ9BVJ6 771 aaKnown RBP7.51□□□□□ -1.21
PDE4D-228ENST00000636120 TANGO6Q9C0B7 1094 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 SPHKAPQ2M3C7 1700 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 KIAA0232Q92628 1395 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 RANBP6O60518 1105 aaKnown RBP7.51□□□□□ -1.21
PDE4D-228ENST00000636120 SSFA2P28290 1259 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 ANKRD18AQ8IVF6 992 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 KIF20AO95235 890 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 FBLN1P23142 703 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 TMEM67Q5HYA8 995 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 SMC5Q8IY18 1101 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 PRM3Q9NNZ6 103 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 PLEKHG3A1L390 1219 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 NEMFO60524 1076 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 ATP6V1AP38606 617 aa7.51□□□□□ -1.21
PDE4D-228ENST00000636120 PPP1R12BO60237 982 aaPredicted RBP7.5□□□□□ -1.21
PDE4D-228ENST00000636120 METAP2P50579 478 aaKnown RBP eCLIP7.5□□□□□ -1.21
PDE4D-228ENST00000636120 UBE2HP62256 183 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 CCDC112Q8NEF3 446 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 LRRC59Q96AG4 307 aaKnown RBP7.5□□□□□ -1.21
PDE4D-228ENST00000636120 BMP15O95972 392 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 IARSP41252 1262 aaKnown RBP7.5□□□□□ -1.21
PDE4D-228ENST00000636120 STX1AQ16623 288 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 ATP2B3Q16720 1220 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 NLRP1Q9C000 1473 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 LRRC27Q9C0I9 530 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 KAT14Q9H8E8 782 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 ERLIN1O75477 346 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 NLRP5P59047 1200 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 DDB1Q16531 1140 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 C8orf34Q49A92 452 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 NOM1Q5C9Z4 860 aaKnown RBP7.5□□□□□ -1.21
PDE4D-228ENST00000636120 ZSCAN12O43309 604 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 BAG4O95429 457 aaKnown RBP7.5□□□□□ -1.21
PDE4D-228ENST00000636120 HLA-DOAP06340 250 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 ZSCAN22P10073 491 aaPredicted RBP7.5□□□□□ -1.21
PDE4D-228ENST00000636120 NBPF6Q5VWK0 638 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 NBPF5PQ86XG9 351 aaPredicted RBP7.5□□□□□ -1.21
PDE4D-228ENST00000636120 NBPF4Q96M43 638 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 SETDB2Q96T68 719 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 ZHX3Q9H4I2 956 aa7.5□□□□□ -1.21
PDE4D-228ENST00000636120 AATKQ6ZMQ8 1374 aa7.49□□□□□ -1.21
PDE4D-228ENST00000636120 CCDC194A0A1B0GVG4 234 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms