RNA–Protein interactions for RNA: ENST00000635885.1

SYNGAP1-209, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-209ENST00000635885 CERKQ8TCT0 537 aa12.54□□□□□ -0.4
SYNGAP1-209ENST00000635885 SIL1Q9H173 461 aa12.54□□□□□ -0.4
SYNGAP1-209ENST00000635885 TCHHQ07283 1943 aa12.54□□□□□ -0.4
SYNGAP1-209ENST00000635885 GOLGA6L3A6NEY3 463 aa12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 ATP5J2-PTCD1G3V325 749 aa12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 GOLGA6L22H0YM25 854 aa12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 H7C1W4 665 aa12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 PTCD1O75127 700 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 PIP4K2BP78356 416 aa12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 UBE3BQ7Z3V4 1068 aa12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 KLHDC4Q8TBB5 520 aa12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 DDX54Q8TDD1 881 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 KCNB2Q92953 911 aa12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 INTS4Q96HW7 963 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 STRN4Q9NRL3 753 aa12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 ZDHHC9Q9Y397 364 aa12.53□□□□□ -0.4
SYNGAP1-209ENST00000635885 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.52□□□□□ -0.41
SYNGAP1-209ENST00000635885 A0A087WZG4 1122 aa12.52□□□□□ -0.41
SYNGAP1-209ENST00000635885 HIP1O00291 1037 aa12.52□□□□□ -0.41
SYNGAP1-209ENST00000635885 A1BGP04217 495 aa12.52□□□□□ -0.41
SYNGAP1-209ENST00000635885 PTH1RQ03431 593 aa12.52□□□□□ -0.41
SYNGAP1-209ENST00000635885 PTPN12Q05209 780 aaKnown RBP12.52□□□□□ -0.41
SYNGAP1-209ENST00000635885 TTLL7Q6ZT98 887 aa12.52□□□□□ -0.41
SYNGAP1-209ENST00000635885 TLR7Q9NYK1 1049 aaKnown RBP12.52□□□□□ -0.41
SYNGAP1-209ENST00000635885 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.41
SYNGAP1-209ENST00000635885 FOXO4P98177 505 aa12.51□□□□□ -0.41
SYNGAP1-209ENST00000635885 NMIQ13287 307 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-209ENST00000635885 PKP1Q13835 747 aa12.51□□□□□ -0.41
SYNGAP1-209ENST00000635885 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
SYNGAP1-209ENST00000635885 TTC14Q96N46 770 aa12.51□□□□□ -0.41
SYNGAP1-209ENST00000635885 UPF3BQ9BZI7 483 aaKnown RBP12.51□□□□□ -0.41
SYNGAP1-209ENST00000635885 TFCP2Q12800 502 aa12.5□□□□□ -0.41
SYNGAP1-209ENST00000635885 MCTP1Q6DN14 999 aa12.5□□□□□ -0.41
SYNGAP1-209ENST00000635885 NOL8Q76FK4 1167 aaKnown RBP12.5□□□□□ -0.41
SYNGAP1-209ENST00000635885 BOLA2Q9H3K6 86 aa12.5□□□□□ -0.41
SYNGAP1-209ENST00000635885 SNRKQ9NRH2 765 aa12.5□□□□□ -0.41
SYNGAP1-209ENST00000635885 LMBRD1Q9NUN5 540 aa12.5□□□□□ -0.41
SYNGAP1-209ENST00000635885 CWC25Q9NXE8 425 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-209ENST00000635885 COL22A1Q8NFW1 1626 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-209ENST00000635885 PLCH1Q4KWH8 1693 aa12.5□□□□□ -0.41
SYNGAP1-209ENST00000635885 ANKRD36CQ5JPF3 1778 aa12.5□□□□□ -0.41
SYNGAP1-209ENST00000635885 CCDC171Q6TFL3 1326 aa12.49□□□□□ -0.41
SYNGAP1-209ENST00000635885 XRCC6P12956 609 aaKnown RBP eCLIP12.49□□□□□ -0.41
SYNGAP1-209ENST00000635885 ATP5JP18859 108 aa12.49□□□□□ -0.41
SYNGAP1-209ENST00000635885 TNNI3KQ59H18 835 aa12.49□□□□□ -0.41
SYNGAP1-209ENST00000635885 LMBR1LQ6UX01 489 aa12.49□□□□□ -0.41
SYNGAP1-209ENST00000635885 ISY1Q9ULR0 285 aaKnown RBP12.49□□□□□ -0.41
SYNGAP1-209ENST00000635885 FPGT-TNNI3KV9GXZ4 949 aa12.49□□□□□ -0.41
SYNGAP1-209ENST00000635885 MYH3P11055 1940 aa12.49□□□□□ -0.41
SYNGAP1-209ENST00000635885 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 COL16A1Q07092 1604 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 BRD1O95696 1058 aa12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 KLHL40Q2TBA0 621 aa12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 PRPF40BQ6NWY9 871 aaKnown RBP12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 CCDC191Q8NCU4 936 aa12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 FAM227BQ96M60 508 aa12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 FSD1Q9BTV5 496 aa12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 TM6SF1Q9BZW5 370 aa12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 TMOD3Q9NYL9 352 aa12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 NUP98P52948 1817 aa12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 LRP6O75581 1613 aa12.48□□□□□ -0.41
SYNGAP1-209ENST00000635885 DISP2A7MBM2 1401 aa12.47□□□□□ -0.41
SYNGAP1-209ENST00000635885 JCADQ9P266 1359 aa12.47□□□□□ -0.41
SYNGAP1-209ENST00000635885 MRE11P49959 708 aa12.47□□□□□ -0.41
SYNGAP1-209ENST00000635885 AK2P54819 239 aa12.47□□□□□ -0.41
SYNGAP1-209ENST00000635885 NECTIN1Q15223 517 aa12.47□□□□□ -0.41
SYNGAP1-209ENST00000635885 RUFY3Q7L099 469 aa12.47□□□□□ -0.41
SYNGAP1-209ENST00000635885 ISCA1Q9BUE6 129 aa12.47□□□□□ -0.41
SYNGAP1-209ENST00000635885 DBNLQ9UJU6 430 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-209ENST00000635885 RBM8AQ9Y5S9 174 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-209ENST00000635885 DDX49Q9Y6V7 483 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-209ENST00000635885 RFX7Q2KHR2 1363 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 MED23Q9ULK4 1368 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 PHLPP1O60346 1717 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 A0A0D9SFI3 127 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 CREB3L3Q68CJ9 461 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 MAP4K1Q92918 833 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 JAKMIP1Q96N16 626 aaKnown RBP12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 DBNDD2Q9BQY9 259 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 TEX13AQ9BXU3 409 aaPredicted RBP12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 ZBTB3Q9H5J0 574 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 ZSWIM6Q9HCJ5 1215 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 GPR108Q9NPR9 543 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 PDRG1Q9NUG6 133 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 BTG4Q9NY30 223 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 LIMCH1Q9UPQ0 1083 aa12.46□□□□□ -0.41
SYNGAP1-209ENST00000635885 MYH7P12883 1935 aa12.46□□□□□ -0.42
SYNGAP1-209ENST00000635885 SPEF2Q9C093 1822 aa12.46□□□□□ -0.42
SYNGAP1-209ENST00000635885 SLC27A2O14975 620 aa12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 CASTP20810 708 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 TCIRG1Q13488 830 aa12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 VPS53Q5VIR6 699 aa12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 FOXD4L5Q5VV16 416 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 ATG9AQ7Z3C6 839 aa12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 GAS2L3Q86XJ1 694 aa12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 DNAJC10Q8IXB1 793 aa12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 VSIG10Q8N0Z9 540 aa12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 FOXD4L4Q8WXT5 416 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 PIGBQ92521 554 aa12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 CDCA7Q9BWT1 371 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms