RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 HLTFQ14527 1009 aaKnown RBP eCLIP11.13□□□□□ -0.63
GABRB3-217ENST00000635832 KRT28Q7Z3Y7 464 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 FERMT3Q86UX7 667 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 EHBP1Q8NDI1 1231 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 PRPHP41219 470 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 NDC80O14777 642 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 PRPF4BQ13523 1007 aaKnown RBP11.13□□□□□ -0.63
GABRB3-217ENST00000635832 CAMK4Q16566 473 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 ZBTB3Q9H5J0 574 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 EXOC1Q9NV70 894 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 BCCIPQ9P287 314 aaKnown RBP eCLIP11.13□□□□□ -0.63
GABRB3-217ENST00000635832 TTC21BQ7Z4L5 1316 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 MSANTD4Q8NCY6 345 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 NCOA7Q8NI08 942 aa11.13□□□□□ -0.63
GABRB3-217ENST00000635832 CCDC8Q9H0W5 538 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-217ENST00000635832 TMEM57Q8N5G2 664 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 FAM107BQ9H098 131 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 DDX19AQ9NUU7 478 aaKnown RBP11.12□□□□□ -0.63
GABRB3-217ENST00000635832 FOXO3O43524 673 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 TSPY3P0CV98 308 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 TSPY8P0CW00 308 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 DNA2P51530 1060 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 KIAA0753Q2KHM9 967 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 TRMT1LQ7Z2T5 733 aaKnown RBP11.12□□□□□ -0.63
GABRB3-217ENST00000635832 TMTC2Q8N394 836 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 IL27Q8NEV9 243 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 LMOD1P29536 600 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-217ENST00000635832 ARL1P40616 181 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-217ENST00000635832 GSDMDP57764 484 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 KIAA1524Q8TCG1 905 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 JDP2Q8WYK2 163 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 SETDB2Q96T68 719 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 KRT23Q9C075 422 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 MIS18AQ9NYP9 233 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 LIMCH1Q9UPQ0 1083 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 PTPRCP08575 1304 aa11.12□□□□□ -0.63
GABRB3-217ENST00000635832 URI1O94763 535 aaPredicted RBP11.11□□□□□ -0.63
GABRB3-217ENST00000635832 DHX37Q8IY37 1157 aaKnown RBP11.11□□□□□ -0.63
GABRB3-217ENST00000635832 AMOTL2Q9Y2J4 779 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 USP16Q9Y5T5 823 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 METAP2P50579 478 aaKnown RBP eCLIP11.11□□□□□ -0.63
GABRB3-217ENST00000635832 ZNF804AQ7Z570 1209 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 OTUD6BQ8N6M0 293 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 IQCGQ9H095 443 aaKnown RBP11.11□□□□□ -0.63
GABRB3-217ENST00000635832 TROQ12816 1431 aaPredicted RBP11.11□□□□□ -0.63
GABRB3-217ENST00000635832 HMG20BQ9P0W2 317 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.11□□□□□ -0.63
GABRB3-217ENST00000635832 MRC2Q9UBG0 1479 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 CFAP57Q96MR6 1250 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 NYXQ9GZU5 481 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 C6orf50Q9HD87 102 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 ERICH3Q5RHP9 1530 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 USHBP1Q8N6Y0 703 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 FSIP1Q8NA03 581 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 SMARCC2Q8TAQ2 1214 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 NLRP3Q96P20 1036 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 EHBP1L1Q8N3D4 1523 aa11.11□□□□□ -0.63
GABRB3-217ENST00000635832 SNRPA1P09661 255 aaKnown RBP11.1□□□□□ -0.63
GABRB3-217ENST00000635832 ZFYP08048 801 aaPredicted RBP11.1□□□□□ -0.63
GABRB3-217ENST00000635832 CKAP4Q07065 602 aaKnown RBP11.1□□□□□ -0.63
GABRB3-217ENST00000635832 CNNM2Q9H8M5 875 aa11.1□□□□□ -0.63
GABRB3-217ENST00000635832 UQCRHLA0A096LP55 91 aa11.1□□□□□ -0.63
GABRB3-217ENST00000635832 UQCRHP07919 91 aa11.1□□□□□ -0.63
GABRB3-217ENST00000635832 GUCY1B3Q02153 619 aa11.1□□□□□ -0.63
GABRB3-217ENST00000635832 TCHPQ9BT92 498 aa11.1□□□□□ -0.63
GABRB3-217ENST00000635832 PLCG2P16885 1265 aa11.1□□□□□ -0.63
GABRB3-217ENST00000635832 CEP112Q8N8E3 955 aa11.1□□□□□ -0.63
GABRB3-217ENST00000635832 BIN2Q9UBW5 565 aaPredicted RBP11.1□□□□□ -0.63
GABRB3-217ENST00000635832 STX8Q9UNK0 236 aa11.1□□□□□ -0.63
GABRB3-217ENST00000635832 SPAG5Q96R06 1193 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 EYA3Q99504 573 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 CLIP2Q9UDT6 1046 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 MSH6P52701 1360 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 RFX1P22670 979 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 CPLX3Q8WVH0 158 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 ESR2Q92731 530 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 CCDC77Q9BR77 488 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 RASAL2Q9UJF2 1139 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 PARP3Q9Y6F1 533 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 ATP2A1O14983 1001 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 TNNI2P48788 182 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 WTAPQ15007 396 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 STX1AQ16623 288 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 CCDC14Q49A88 953 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 CCDC102BQ68D86 513 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 TRIM47Q96LD4 638 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 RBM27Q9P2N5 1060 aaKnown RBP11.09□□□□□ -0.63
GABRB3-217ENST00000635832 MPNDQ8N594 471 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 GTPBP4Q9BZE4 634 aaKnown RBP11.09□□□□□ -0.63
GABRB3-217ENST00000635832 ORC3Q9UBD5 711 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-217ENST00000635832 NAIPQ13075 1403 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.09□□□□□ -0.63
GABRB3-217ENST00000635832 MAP3K2Q9Y2U5 619 aa11.09□□□□□ -0.63
GABRB3-217ENST00000635832 V9GYY5 206 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-217ENST00000635832 CCDC141Q6ZP82 1450 aa11.08□□□□□ -0.64
GABRB3-217ENST00000635832 UBAP1LF5GYI3 381 aa11.08□□□□□ -0.64
GABRB3-217ENST00000635832 SLC26A6Q9BXS9 759 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms