RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 ATP5J2-PTCD1G3V325 749 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 DPEP1P16444 411 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 NEXNQ0ZGT2 675 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 SSH1Q8WYL5 1049 aa19.76■□□□□ 0.75
CLN6-211ENST00000635754 METTL22Q9BUU2 404 aaPredicted RBP19.76■□□□□ 0.75
CLN6-211ENST00000635754 COL11A2P13942 1736 aaPredicted RBP19.75■□□□□ 0.75
CLN6-211ENST00000635754 NUTM1Q86Y26 1132 aa19.75■□□□□ 0.75
CLN6-211ENST00000635754 SMC4Q9NTJ3 1288 aa19.75■□□□□ 0.75
CLN6-211ENST00000635754 PDZRN3Q9UPQ7 1066 aa19.75■□□□□ 0.75
CLN6-211ENST00000635754 H0YIN7 160 aa19.74■□□□□ 0.75
CLN6-211ENST00000635754 CHRNA5P30532 468 aa19.74■□□□□ 0.75
CLN6-211ENST00000635754 TRIM28Q13263 835 aaKnown RBP19.74■□□□□ 0.75
CLN6-211ENST00000635754 ERFEQ4G0M1 354 aa19.74■□□□□ 0.75
CLN6-211ENST00000635754 PELP1Q8IZL8 1130 aaKnown RBP19.74■□□□□ 0.75
CLN6-211ENST00000635754 MRPL50Q8N5N7 158 aaKnown RBP19.74■□□□□ 0.75
CLN6-211ENST00000635754 BCL2L13Q9BXK5 485 aa19.74■□□□□ 0.75
CLN6-211ENST00000635754 TRMT112Q9UI30 125 aaKnown RBP19.74■□□□□ 0.75
CLN6-211ENST00000635754 TNRC6CQ9HCJ0 1690 aaKnown RBP19.74■□□□□ 0.75
CLN6-211ENST00000635754 RIC1Q4ADV7 1423 aa19.73■□□□□ 0.75
CLN6-211ENST00000635754 ABCC12Q96J65 1359 aa19.73■□□□□ 0.75
CLN6-211ENST00000635754 C2CD5Q86YS7 1000 aa19.73■□□□□ 0.75
CLN6-211ENST00000635754 DNAAF4Q8WXU2 420 aa19.73■□□□□ 0.75
CLN6-211ENST00000635754 GPR162Q16538 588 aa19.72■□□□□ 0.75
CLN6-211ENST00000635754 CCDC191Q8NCU4 936 aa19.72■□□□□ 0.75
CLN6-211ENST00000635754 PTPRCP08575 1304 aa19.72■□□□□ 0.75
CLN6-211ENST00000635754 SH3TC1Q8TE82 1336 aa19.72■□□□□ 0.75
CLN6-211ENST00000635754 KCNA3P22001 575 aa19.71■□□□□ 0.75
CLN6-211ENST00000635754 PIM2Q9P1W9 311 aa19.71■□□□□ 0.75
CLN6-211ENST00000635754 WWC3Q9ULE0 1092 aa19.71■□□□□ 0.75
CLN6-211ENST00000635754 LAMB2P55268 1798 aa19.71■□□□□ 0.75
CLN6-211ENST00000635754 RARSP54136 660 aaKnown RBP19.7■□□□□ 0.74
CLN6-211ENST00000635754 CWC25Q9NXE8 425 aaPredicted RBP19.7■□□□□ 0.74
CLN6-211ENST00000635754 CACNA1SQ13698 1873 aa19.69■□□□□ 0.74
CLN6-211ENST00000635754 DDX60Q8IY21 1712 aaKnown RBP19.69■□□□□ 0.74
CLN6-211ENST00000635754 F6X3S4 739 aa19.69■□□□□ 0.74
CLN6-211ENST00000635754 ARFGEF1Q9Y6D6 1849 aa19.69■□□□□ 0.74
CLN6-211ENST00000635754 KLRG2A4D1S0 409 aaPredicted RBP19.68■□□□□ 0.74
CLN6-211ENST00000635754 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
CLN6-211ENST00000635754 ZBTB38Q8NAP3 1195 aaPredicted RBP19.68■□□□□ 0.74
CLN6-211ENST00000635754 LINS1Q8NG48 757 aa19.68■□□□□ 0.74
CLN6-211ENST00000635754 YTHDC1Q96MU7 727 aaKnown RBP19.68■□□□□ 0.74
CLN6-211ENST00000635754 BCS1LQ9Y276 419 aa19.68■□□□□ 0.74
CLN6-211ENST00000635754 NEURL1BA8MQ27 555 aa19.68■□□□□ 0.74
CLN6-211ENST00000635754 SRGNP10124 158 aa19.68■□□□□ 0.74
CLN6-211ENST00000635754 BRPF1P55201 1214 aaPredicted RBP19.68■□□□□ 0.74
CLN6-211ENST00000635754 CWF19L2Q2TBE0 894 aaKnown RBP19.68■□□□□ 0.74
CLN6-211ENST00000635754 DALRD3Q5D0E6 543 aaKnown RBP19.68■□□□□ 0.74
CLN6-211ENST00000635754 SLC10A5Q5PT55 438 aa19.68■□□□□ 0.74
CLN6-211ENST00000635754 ZNF622Q969S3 477 aaKnown RBP eCLIP19.68■□□□□ 0.74
CLN6-211ENST00000635754 FAM89AQ96GI7 184 aa19.68■□□□□ 0.74
CLN6-211ENST00000635754 MASTLQ96GX5 879 aa19.68■□□□□ 0.74
CLN6-211ENST00000635754 KIF16BQ96L93 1317 aa19.67■□□□□ 0.74
CLN6-211ENST00000635754 GOLGB1Q14789 3259 aaKnown RBP19.67■□□□□ 0.74
CLN6-211ENST00000635754 YBX3P16989 372 aaKnown RBP eCLIP19.67■□□□□ 0.74
CLN6-211ENST00000635754 STYK1Q6J9G0 422 aa19.67■□□□□ 0.74
CLN6-211ENST00000635754 SYNE4Q8N205 404 aa19.67■□□□□ 0.74
CLN6-211ENST00000635754 TTLL6Q8N841 843 aa19.67■□□□□ 0.74
CLN6-211ENST00000635754 NLRP3Q96P20 1036 aa19.67■□□□□ 0.74
CLN6-211ENST00000635754 PCCAP05165 728 aaPredicted RBP19.66■□□□□ 0.74
CLN6-211ENST00000635754 HCLS1P14317 486 aaPredicted RBP19.66■□□□□ 0.74
CLN6-211ENST00000635754 NPR1P16066 1061 aa19.66■□□□□ 0.74
CLN6-211ENST00000635754 RTL5Q5HYW3 569 aaPredicted RBP19.66■□□□□ 0.74
CLN6-211ENST00000635754 SLC4A10Q6U841 1118 aa19.66■□□□□ 0.74
CLN6-211ENST00000635754 GRIN3BO60391 1043 aa19.65■□□□□ 0.74
CLN6-211ENST00000635754 HSP90B1P14625 803 aaKnown RBP19.65■□□□□ 0.74
CLN6-211ENST00000635754 CRY2Q49AN0 593 aa19.65■□□□□ 0.74
CLN6-211ENST00000635754 BEND3Q5T5X7 828 aa19.65■□□□□ 0.74
CLN6-211ENST00000635754 RPGRQ92834 1020 aaKnown RBP19.65■□□□□ 0.74
CLN6-211ENST00000635754 CNKSR1Q969H4 720 aa19.65■□□□□ 0.74
CLN6-211ENST00000635754 IRS4O14654 1257 aaPredicted RBP19.64■□□□□ 0.73
CLN6-211ENST00000635754 GCKRQ14397 625 aa19.64■□□□□ 0.73
CLN6-211ENST00000635754 NOB1Q9ULX3 412 aaKnown RBP19.64■□□□□ 0.73
CLN6-211ENST00000635754 SRCIN1Q9C0H9 1055 aa19.63■□□□□ 0.73
CLN6-211ENST00000635754 MYH3P11055 1940 aa19.63■□□□□ 0.73
CLN6-211ENST00000635754 BCAR3O75815 825 aa19.62■□□□□ 0.73
CLN6-211ENST00000635754 ALDH1L1O75891 902 aa19.62■□□□□ 0.73
CLN6-211ENST00000635754 C3orf67Q6ZVT6 689 aa19.62■□□□□ 0.73
CLN6-211ENST00000635754 SLX4Q8IY92 1834 aa19.62■□□□□ 0.73
CLN6-211ENST00000635754 CDHR2Q9BYE9 1310 aa19.62■□□□□ 0.73
CLN6-211ENST00000635754 API5Q9BZZ5 524 aaKnown RBP19.62■□□□□ 0.73
CLN6-211ENST00000635754 ALDH1B1P30837 517 aa19.61■□□□□ 0.73
CLN6-211ENST00000635754 PRPF40BQ6NWY9 871 aaKnown RBP19.61■□□□□ 0.73
CLN6-211ENST00000635754 UBE3BQ7Z3V4 1068 aa19.61■□□□□ 0.73
CLN6-211ENST00000635754 JARID2Q92833 1246 aaPredicted RBP19.61■□□□□ 0.73
CLN6-211ENST00000635754 RBM17Q96I25 401 aaKnown RBP19.61■□□□□ 0.73
CLN6-211ENST00000635754 IPO8O15397 1037 aaKnown RBP19.6■□□□□ 0.73
CLN6-211ENST00000635754 HOXA10P31260 410 aaPredicted RBP19.6■□□□□ 0.73
CLN6-211ENST00000635754 ARHGAP45Q92619 1136 aa19.6■□□□□ 0.73
CLN6-211ENST00000635754 CHD4Q14839 1912 aa19.6■□□□□ 0.73
CLN6-211ENST00000635754 H7C1W4 665 aa19.59■□□□□ 0.73
CLN6-211ENST00000635754 KCNA4P22459 653 aa19.59■□□□□ 0.73
CLN6-211ENST00000635754 FRAT1Q92837 279 aaPredicted RBP19.59■□□□□ 0.73
CLN6-211ENST00000635754 PDE8AO60658 829 aa19.59■□□□□ 0.73
CLN6-211ENST00000635754 NPM3O75607 178 aaKnown RBP19.59■□□□□ 0.73
CLN6-211ENST00000635754 CRAMP1Q96RY5 1269 aa19.59■□□□□ 0.73
CLN6-211ENST00000635754 SF3B3Q15393 1217 aaKnown RBP19.58■□□□□ 0.72
CLN6-211ENST00000635754 DDX46Q7L014 1031 aaKnown RBP19.58■□□□□ 0.72
CLN6-211ENST00000635754 C9orf78Q9NZ63 289 aaPredicted RBP19.58■□□□□ 0.72
CLN6-211ENST00000635754 GRM8O00222 908 aa19.57■□□□□ 0.72
CLN6-211ENST00000635754 ZNF219Q9P2Y4 722 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms