RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 FOXJ1Q92949 421 aa10□□□□□ -0.81
SMARCA2-243ENST00000635590 SPOCK3Q9BQ16 436 aa10□□□□□ -0.81
SMARCA2-243ENST00000635590 MRVI1Q9Y6F6 885 aa10□□□□□ -0.81
SMARCA2-243ENST00000635590 RAB15P59190 212 aa10□□□□□ -0.81
SMARCA2-243ENST00000635590 RAB33AQ14088 237 aa10□□□□□ -0.81
SMARCA2-243ENST00000635590 POTEHQ6S545 545 aa10□□□□□ -0.81
SMARCA2-243ENST00000635590 SH3TC2Q8TF17 1288 aa10□□□□□ -0.81
SMARCA2-243ENST00000635590 TYW1Q9NV66 732 aaKnown RBP10□□□□□ -0.81
SMARCA2-243ENST00000635590 DNMBPQ6XZF7 1577 aa9.99□□□□□ -0.81
SMARCA2-243ENST00000635590 NASPP49321 788 aaPredicted RBP9.99□□□□□ -0.81
SMARCA2-243ENST00000635590 ST13P50502 369 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-243ENST00000635590 ETFBKMTQ8IXQ9 262 aa9.99□□□□□ -0.81
SMARCA2-243ENST00000635590 DNAJC25Q9H1X3 360 aa9.99□□□□□ -0.81
SMARCA2-243ENST00000635590 TMX1Q9H3N1 280 aa9.99□□□□□ -0.81
SMARCA2-243ENST00000635590 TARBP1Q13395 1621 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-243ENST00000635590 INHAP05111 366 aa9.98□□□□□ -0.81
SMARCA2-243ENST00000635590 FOXK2Q01167 660 aa9.98□□□□□ -0.81
SMARCA2-243ENST00000635590 ODR4Q5SWX8 454 aa9.98□□□□□ -0.81
SMARCA2-243ENST00000635590 PI16Q6UXB8 463 aa9.98□□□□□ -0.81
SMARCA2-243ENST00000635590 APBB1IPQ7Z5R6 666 aaPredicted RBP9.98□□□□□ -0.81
SMARCA2-243ENST00000635590 PCDHB3Q9Y5E6 796 aa9.98□□□□□ -0.81
SMARCA2-243ENST00000635590 SLC9A9Q8IVB4 645 aa9.98□□□□□ -0.81
SMARCA2-243ENST00000635590 IER2Q9BTL4 223 aa9.98□□□□□ -0.81
SMARCA2-243ENST00000635590 SPON2Q9BUD6 331 aa9.98□□□□□ -0.81
SMARCA2-243ENST00000635590 GABBR2O75899 941 aa9.97□□□□□ -0.81
SMARCA2-243ENST00000635590 APLP1P51693 650 aa9.97□□□□□ -0.81
SMARCA2-243ENST00000635590 GYS2P54840 703 aa9.97□□□□□ -0.81
SMARCA2-243ENST00000635590 HNRNPLLQ8WVV9 542 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-243ENST00000635590 LRCH3Q96II8 777 aa9.97□□□□□ -0.81
SMARCA2-243ENST00000635590 KBTBD4Q9NVX7 518 aa9.97□□□□□ -0.81
SMARCA2-243ENST00000635590 TTF2Q9UNY4 1162 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-243ENST00000635590 CREB3O43889 395 aa9.96□□□□□ -0.81
SMARCA2-243ENST00000635590 ZAP70P43403 619 aa9.96□□□□□ -0.81
SMARCA2-243ENST00000635590 DMRTA1Q5VZB9 504 aa9.96□□□□□ -0.81
SMARCA2-243ENST00000635590 BAP1Q92560 729 aa9.96□□□□□ -0.81
SMARCA2-243ENST00000635590 APPBP2Q92624 585 aa9.96□□□□□ -0.81
SMARCA2-243ENST00000635590 SLC4A9Q96Q91 983 aa9.96□□□□□ -0.81
SMARCA2-243ENST00000635590 SPSB2Q99619 263 aa9.96□□□□□ -0.81
SMARCA2-243ENST00000635590 C1QTNF2Q9BXJ5 285 aa9.96□□□□□ -0.81
SMARCA2-243ENST00000635590 ETNK1Q9HBU6 452 aa9.96□□□□□ -0.81
SMARCA2-243ENST00000635590 SCHIP1Q9P0W5 487 aaPredicted RBP9.96□□□□□ -0.81
SMARCA2-243ENST00000635590 CCDC85CA6NKD9 419 aa9.96□□□□□ -0.82
SMARCA2-243ENST00000635590 ARSHQ5FYA8 562 aa9.96□□□□□ -0.82
SMARCA2-243ENST00000635590 KIAA0907Q7Z7F0 614 aaPredicted RBP9.96□□□□□ -0.82
SMARCA2-243ENST00000635590 CCDC24Q8N4L8 307 aa9.96□□□□□ -0.82
SMARCA2-243ENST00000635590 OSBPL3Q9H4L5 887 aa9.96□□□□□ -0.82
SMARCA2-243ENST00000635590 VPS9D1Q9Y2B5 631 aa9.96□□□□□ -0.82
SMARCA2-243ENST00000635590 ESYT3A0FGR9 886 aa9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 GIPC1O14908 333 aa9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 PRC1O43663 620 aa9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 CPNE3O75131 537 aaKnown RBP9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 RHBDL3P58872 404 aa9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 LRP10Q7Z4F1 713 aa9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 KIAA0825Q8IV33 1275 aa9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 LILRB2Q8N423 598 aa9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 EVI5LQ96CN4 794 aa9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 SGSM3Q96HU1 749 aa9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 NBPF3Q9H094 633 aa9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 EFR3BQ9Y2G0 817 aa9.95□□□□□ -0.82
SMARCA2-243ENST00000635590 USP17L7P0C7H9 530 aa9.94□□□□□ -0.82
SMARCA2-243ENST00000635590 ERVK-9P63128 1117 aa9.94□□□□□ -0.82
SMARCA2-243ENST00000635590 LINC01559Q495D7 138 aa9.94□□□□□ -0.82
SMARCA2-243ENST00000635590 FERMT3Q86UX7 667 aa9.94□□□□□ -0.82
SMARCA2-243ENST00000635590 PRPF38AQ8NAV1 312 aaKnown RBP9.94□□□□□ -0.82
SMARCA2-243ENST00000635590 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.94□□□□□ -0.82
SMARCA2-243ENST00000635590 FAM8A1Q9UBU6 413 aa9.94□□□□□ -0.82
SMARCA2-243ENST00000635590 CDV3Q9UKY7 258 aaKnown RBP9.94□□□□□ -0.82
SMARCA2-243ENST00000635590 POLA1P09884 1462 aaPredicted RBP9.94□□□□□ -0.82
SMARCA2-243ENST00000635590 A6NHS1 94 aa9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 NEFLP07196 543 aa9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 IRS1P35568 1242 aa9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 PSMA6P60900 246 aaKnown RBP9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 EPS8L3Q8TE67 593 aaKnown RBP9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 GGNBP2Q9H3C7 697 aa9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 ADAMTS1Q9UHI8 967 aa9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 ERVH48-1M5A8F1 160 aa9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 ARHGAP33O14559 1287 aa9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 CCDC136Q96JN2 1154 aa9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 ESF1Q9H501 851 aaKnown RBP9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 GINM1Q9NU53 330 aa9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 THRAP3Q9Y2W1 955 aaKnown RBP9.93□□□□□ -0.82
SMARCA2-243ENST00000635590 TDRD9Q8NDG6 1382 aaKnown RBP9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 CLASP1Q7Z460 1538 aa9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 NOS2P35228 1153 aa9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 MASP1P48740 699 aa9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 RALBP1Q15311 655 aa9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 C8orf34Q49A92 452 aa9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 POTEEQ6S8J3 1075 aa9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 HOMER1Q86YM7 354 aa9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 TRMT44Q8IYL2 757 aaKnown RBP9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 ZNF511Q8NB15 262 aa9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 NUDT16Q96DE0 195 aaKnown RBP9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 NGLY1Q96IV0 654 aa9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 KCTD15Q96SI1 283 aaPredicted RBP9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 SOGA1O94964 1423 aa9.92□□□□□ -0.82
SMARCA2-243ENST00000635590 BIRC2Q13490 618 aa9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 USPL1Q5W0Q7 1092 aa9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 TRPM4Q8TD43 1214 aa9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 DNAJC7Q99615 494 aa9.91□□□□□ -0.82
SMARCA2-243ENST00000635590 GEMIN8Q9NWZ8 242 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms