RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 ASXL1Q8IXJ9 1541 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 ABCA10Q8WWZ4 1543 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 KIAA0586Q9BVV6 1533 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 CTAGE15A4D2H0 777 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 FAM83GA6ND36 823 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 CTAGE8P0CG41 777 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 CTAGE6Q86UF2 777 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 CTAGE4Q8IX94 777 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 ORC3Q9UBD5 711 aaPredicted RBP13.42□□□□□ -0.26
COL11A1-211ENST00000635193 UBASH3AP57075 661 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 CEP57Q86XR8 500 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 ANKRD44Q8N8A2 993 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 DNAJC25Q9H1X3 360 aa13.42□□□□□ -0.26
COL11A1-211ENST00000635193 DBF4Q9UBU7 674 aaPredicted RBP13.42□□□□□ -0.26
COL11A1-211ENST00000635193 MINDY4BA8MYZ0 360 aa13.41□□□□□ -0.26
COL11A1-211ENST00000635193 DNM1Q05193 864 aaKnown RBP13.41□□□□□ -0.26
COL11A1-211ENST00000635193 ABCF2Q9UG63 623 aa13.41□□□□□ -0.26
COL11A1-211ENST00000635193 MEIS3Q99687 375 aa13.41□□□□□ -0.26
COL11A1-211ENST00000635193 GBP6Q6ZN66 633 aa13.41□□□□□ -0.26
COL11A1-211ENST00000635193 VPS18Q9P253 973 aa13.41□□□□□ -0.26
COL11A1-211ENST00000635193 TNNQ9UQP3 1299 aa13.41□□□□□ -0.26
COL11A1-211ENST00000635193 FGFR1OPO95684 399 aaKnown RBP13.41□□□□□ -0.26
COL11A1-211ENST00000635193 TERF1P54274 439 aa13.41□□□□□ -0.26
COL11A1-211ENST00000635193 TDRD12Q587J7 1177 aaKnown RBP13.41□□□□□ -0.26
COL11A1-211ENST00000635193 NBPF11Q86T75 865 aa13.41□□□□□ -0.26
COL11A1-211ENST00000635193 PROSER2Q86WR7 435 aaPredicted RBP13.41□□□□□ -0.26
COL11A1-211ENST00000635193 RHPN1Q8TCX5 695 aa13.41□□□□□ -0.26
COL11A1-211ENST00000635193 IFIT3O14879 490 aaKnown RBP13.41□□□□□ -0.26
COL11A1-211ENST00000635193 GABPB1Q06547 395 aaPredicted RBP13.41□□□□□ -0.26
COL11A1-211ENST00000635193 VPS36Q86VN1 386 aa13.41□□□□□ -0.26
COL11A1-211ENST00000635193 ANKRD36BQ8N2N9 1353 aa13.4□□□□□ -0.26
COL11A1-211ENST00000635193 PPFIA3O75145 1194 aa13.4□□□□□ -0.26
COL11A1-211ENST00000635193 IGHMBP2P38935 993 aaKnown RBP13.4□□□□□ -0.26
COL11A1-211ENST00000635193 HYPKQ9NX55 129 aa13.4□□□□□ -0.26
COL11A1-211ENST00000635193 PPP1R12BO60237 982 aaPredicted RBP13.4□□□□□ -0.26
COL11A1-211ENST00000635193 RLBP1P12271 317 aa13.4□□□□□ -0.26
COL11A1-211ENST00000635193 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
COL11A1-211ENST00000635193 CKAP4Q07065 602 aaKnown RBP13.4□□□□□ -0.26
COL11A1-211ENST00000635193 UBE4AQ14139 1066 aa13.4□□□□□ -0.26
COL11A1-211ENST00000635193 MSL1Q68DK7 614 aa13.4□□□□□ -0.26
COL11A1-211ENST00000635193 KANK3Q6NY19 840 aa13.4□□□□□ -0.26
COL11A1-211ENST00000635193 CTCFLQ8NI51 663 aaPredicted RBP13.4□□□□□ -0.26
COL11A1-211ENST00000635193 GOLGA1Q92805 767 aa13.4□□□□□ -0.26
COL11A1-211ENST00000635193 TYRO3Q06418 890 aa13.4□□□□□ -0.26
COL11A1-211ENST00000635193 ZGPATQ8N5A5 531 aaKnown RBP13.4□□□□□ -0.26
COL11A1-211ENST00000635193 JADE2Q9NQC1 790 aa13.4□□□□□ -0.26
COL11A1-211ENST00000635193 GSTTP1A0A1W2PQM5 241 aa13.4□□□□□ -0.27
COL11A1-211ENST00000635193 USP5P45974 858 aa13.4□□□□□ -0.27
COL11A1-211ENST00000635193 C16orf71Q8IYS4 520 aaPredicted RBP13.4□□□□□ -0.27
COL11A1-211ENST00000635193 THEMISQ8N1K5 641 aaPredicted RBP13.4□□□□□ -0.27
COL11A1-211ENST00000635193 OTUD6BQ8N6M0 293 aa13.4□□□□□ -0.27
COL11A1-211ENST00000635193 EHBP1Q8NDI1 1231 aa13.4□□□□□ -0.27
COL11A1-211ENST00000635193 ATRIPQ8WXE1 791 aa13.4□□□□□ -0.27
COL11A1-211ENST00000635193 RNF216Q9NWF9 866 aaPredicted RBP13.4□□□□□ -0.27
COL11A1-211ENST00000635193 KIF14Q15058 1648 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 PIK3R4Q99570 1358 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 VGLL3A8MV65 326 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 SYKP43405 635 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
COL11A1-211ENST00000635193 USHBP1Q8N6Y0 703 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 BRF1Q92994 677 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 GOLIM4O00461 696 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 MTIF2P46199 727 aaKnown RBP13.39□□□□□ -0.27
COL11A1-211ENST00000635193 KRBA2Q6ZNG9 492 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 AOPEPQ8N6M6 819 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 CUL7Q14999 1698 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 KCNH5Q8NCM2 988 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 ZNF608Q9ULD9 1512 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-211ENST00000635193 OPA1O60313 960 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 PTGS1P23219 599 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 MATR3P43243 847 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL11A1-211ENST00000635193 MRPS27Q92552 414 aaKnown RBP13.39□□□□□ -0.27
COL11A1-211ENST00000635193 GTF3C6Q969F1 213 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 CEP63Q96MT8 703 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 MAP3K2Q9Y2U5 619 aa13.39□□□□□ -0.27
COL11A1-211ENST00000635193 MAP3K12Q12852 859 aa13.38□□□□□ -0.27
COL11A1-211ENST00000635193 SPATA24Q86W54 205 aa13.38□□□□□ -0.27
COL11A1-211ENST00000635193 RAPGEF3O95398 923 aa13.38□□□□□ -0.27
COL11A1-211ENST00000635193 AMOTQ4VCS5 1084 aa13.38□□□□□ -0.27
COL11A1-211ENST00000635193 SEC63Q9UGP8 760 aaKnown RBP13.38□□□□□ -0.27
COL11A1-211ENST00000635193 CCDC121Q6ZUS5 278 aa13.38□□□□□ -0.27
COL11A1-211ENST00000635193 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL11A1-211ENST00000635193 ZNF76P36508 570 aa13.38□□□□□ -0.27
COL11A1-211ENST00000635193 SSR1P43307 286 aaKnown RBP13.38□□□□□ -0.27
COL11A1-211ENST00000635193 KCNG4Q8TDN1 519 aa13.38□□□□□ -0.27
COL11A1-211ENST00000635193 RNF41Q9H4P4 317 aaPredicted RBP13.38□□□□□ -0.27
COL11A1-211ENST00000635193 METAP2P50579 478 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL11A1-211ENST00000635193 IQCA1Q86XH1 822 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 RBM8AQ9Y5S9 174 aaKnown RBP13.37□□□□□ -0.27
COL11A1-211ENST00000635193 SYT1P21579 422 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 NLRP5P59047 1200 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 CCDC144CPQ8IYA2 1237 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 TCEANC2Q96MN5 208 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 N4BP3O15049 544 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 MPRIPQ6WCQ1 1025 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 TAOK3Q9H2K8 898 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 NOS1P29475 1434 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 PTPRKQ15262 1439 aa13.37□□□□□ -0.27
COL11A1-211ENST00000635193 A0A087WZG4 1122 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms