RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 NYXQ9GZU5 481 aa23.86■■□□□ 1.41
PNKP-224ENST00000631020 CCDC88AQ3V6T2 1871 aa23.86■■□□□ 1.41
PNKP-224ENST00000631020 SLX4Q8IY92 1834 aa23.85■■□□□ 1.41
PNKP-224ENST00000631020 KIF3CO14782 793 aa23.85■■□□□ 1.41
PNKP-224ENST00000631020 COPS6Q7L5N1 327 aa23.85■■□□□ 1.41
PNKP-224ENST00000631020 XAGE3Q8WTP9 111 aa23.85■■□□□ 1.41
PNKP-224ENST00000631020 BCL2L13Q9BXK5 485 aa23.85■■□□□ 1.41
PNKP-224ENST00000631020 CACNA1SQ13698 1873 aa23.85■■□□□ 1.41
PNKP-224ENST00000631020 ALDH1L2Q3SY69 923 aa23.84■■□□□ 1.41
PNKP-224ENST00000631020 MRPL50Q8N5N7 158 aaKnown RBP23.84■■□□□ 1.41
PNKP-224ENST00000631020 RIC1Q4ADV7 1423 aa23.84■■□□□ 1.41
PNKP-224ENST00000631020 AIMP1Q12904 312 aaKnown RBP23.84■■□□□ 1.41
PNKP-224ENST00000631020 SOGA3Q5TF21 947 aa23.84■■□□□ 1.41
PNKP-224ENST00000631020 GIGYF2Q6Y7W6 1299 aaKnown RBP23.84■■□□□ 1.41
PNKP-224ENST00000631020 KDM2BQ8NHM5 1336 aa23.83■■□□□ 1.41
PNKP-224ENST00000631020 DICER1Q9UPY3 1922 aaKnown RBP23.83■■□□□ 1.41
PNKP-224ENST00000631020 NFKBIEO00221 500 aa23.83■■□□□ 1.41
PNKP-224ENST00000631020 NPR1P16066 1061 aa23.83■■□□□ 1.41
PNKP-224ENST00000631020 RASSF7Q02833 373 aa23.83■■□□□ 1.41
PNKP-224ENST00000631020 LTBP3Q9NS15 1303 aa23.82■■□□□ 1.4
PNKP-224ENST00000631020 TNRC6CQ9HCJ0 1690 aaKnown RBP23.82■■□□□ 1.4
PNKP-224ENST00000631020 PRPF40BQ6NWY9 871 aaKnown RBP23.82■■□□□ 1.4
PNKP-224ENST00000631020 ZNF34Q8IZ26 560 aa23.82■■□□□ 1.4
PNKP-224ENST00000631020 ZBTB3Q9H5J0 574 aa23.82■■□□□ 1.4
PNKP-224ENST00000631020 TIAM2Q8IVF5 1701 aa23.82■■□□□ 1.4
PNKP-224ENST00000631020 C21orf2O43822 256 aa23.81■■□□□ 1.4
PNKP-224ENST00000631020 BCAR3O75815 825 aa23.81■■□□□ 1.4
PNKP-224ENST00000631020 SMC4Q9NTJ3 1288 aa23.81■■□□□ 1.4
PNKP-224ENST00000631020 GTF2E1P29083 439 aaPredicted RBP23.8■■□□□ 1.4
PNKP-224ENST00000631020 ANKRD36CQ5JPF3 1778 aa23.8■■□□□ 1.4
PNKP-224ENST00000631020 PRELPP51888 382 aa23.79■■□□□ 1.4
PNKP-224ENST00000631020 FLIIQ13045 1269 aa23.79■■□□□ 1.4
PNKP-224ENST00000631020 CACNA1FO60840 1977 aa23.79■■□□□ 1.4
PNKP-224ENST00000631020 UBN2Q6ZU65 1347 aa23.79■■□□□ 1.4
PNKP-224ENST00000631020 BRPF1P55201 1214 aaPredicted RBP23.79■■□□□ 1.4
PNKP-224ENST00000631020 CRY2Q49AN0 593 aa23.79■■□□□ 1.4
PNKP-224ENST00000631020 PARP10Q53GL7 1025 aa23.79■■□□□ 1.4
PNKP-224ENST00000631020 FAM177BA6PVY3 158 aa23.78■■□□□ 1.4
PNKP-224ENST00000631020 TOMM70O94826 608 aa23.78■■□□□ 1.4
PNKP-224ENST00000631020 ANKRD13DQ6ZTN6 518 aa23.78■■□□□ 1.4
PNKP-224ENST00000631020 C7orf43Q8WVR3 580 aa23.78■■□□□ 1.4
PNKP-224ENST00000631020 RCAN3Q9UKA8 241 aa23.78■■□□□ 1.4
PNKP-224ENST00000631020 ALDH1B1P30837 517 aa23.77■■□□□ 1.4
PNKP-224ENST00000631020 TAOK3Q9H2K8 898 aa23.77■■□□□ 1.4
PNKP-224ENST00000631020 NMRK2Q9NPI5 230 aa23.77■■□□□ 1.4
PNKP-224ENST00000631020 ABCC12Q96J65 1359 aa23.76■■□□□ 1.39
PNKP-224ENST00000631020 HSP90AB3PQ58FF7 597 aa23.76■■□□□ 1.39
PNKP-224ENST00000631020 PPP1R42Q7Z4L9 355 aa23.76■■□□□ 1.39
PNKP-224ENST00000631020 PLBD2Q8NHP8 589 aa23.76■■□□□ 1.39
PNKP-224ENST00000631020 RNF123Q5XPI4 1314 aa23.76■■□□□ 1.39
PNKP-224ENST00000631020 GPTP24298 496 aa23.75■■□□□ 1.39
PNKP-224ENST00000631020 SUSD4Q5VX71 490 aa23.75■■□□□ 1.39
PNKP-224ENST00000631020 NTSR2O95665 410 aa23.74■■□□□ 1.39
PNKP-224ENST00000631020 ERFEQ4G0M1 354 aa23.74■■□□□ 1.39
PNKP-224ENST00000631020 NUTM1Q86Y26 1132 aa23.74■■□□□ 1.39
PNKP-224ENST00000631020 ZNF219Q9P2Y4 722 aaPredicted RBP23.74■■□□□ 1.39
PNKP-224ENST00000631020 NOB1Q9ULX3 412 aaKnown RBP23.74■■□□□ 1.39
PNKP-224ENST00000631020 PI4KAP2A4QPH2 592 aa23.74■■□□□ 1.39
PNKP-224ENST00000631020 GLTPD2A6NH11 291 aa23.74■■□□□ 1.39
PNKP-224ENST00000631020 FKBP5Q13451 457 aaPredicted RBP23.74■■□□□ 1.39
PNKP-224ENST00000631020 CCDC93Q567U6 631 aa23.74■■□□□ 1.39
PNKP-224ENST00000631020 KSR2Q6VAB6 950 aa23.74■■□□□ 1.39
PNKP-224ENST00000631020 PI4KAP1Q8N8J0 262 aa23.74■■□□□ 1.39
PNKP-224ENST00000631020 HSPA6P17066 643 aa23.73■■□□□ 1.39
PNKP-224ENST00000631020 HOXA10P31260 410 aaPredicted RBP23.73■■□□□ 1.39
PNKP-224ENST00000631020 RIC3Q7Z5B4 369 aa23.73■■□□□ 1.39
PNKP-224ENST00000631020 DDX58O95786 925 aaKnown RBP23.72■■□□□ 1.39
PNKP-224ENST00000631020 RBM46Q8TBY0 533 aaKnown RBP23.72■■□□□ 1.39
PNKP-224ENST00000631020 MAP3K2Q9Y2U5 619 aa23.72■■□□□ 1.39
PNKP-224ENST00000631020 CEP350Q5VT06 3117 aa23.71■■□□□ 1.39
PNKP-224ENST00000631020 F6X3S4 739 aa23.71■■□□□ 1.39
PNKP-224ENST00000631020 SLC10A5Q5PT55 438 aa23.7■■□□□ 1.38
PNKP-224ENST00000631020 RTKN2Q8IZC4 609 aa23.7■■□□□ 1.38
PNKP-224ENST00000631020 UTP14AQ9BVJ6 771 aaKnown RBP23.7■■□□□ 1.38
PNKP-224ENST00000631020 PTPRCP08575 1304 aa23.7■■□□□ 1.38
PNKP-224ENST00000631020 TCIRG1Q13488 830 aa23.69■■□□□ 1.38
PNKP-224ENST00000631020 CC2D2BQ6DHV5 1058 aa23.69■■□□□ 1.38
PNKP-224ENST00000631020 DPY19L2Q6NUT2 758 aa23.69■■□□□ 1.38
PNKP-224ENST00000631020 C16orf71Q8IYS4 520 aaPredicted RBP23.69■■□□□ 1.38
PNKP-224ENST00000631020 WDR90Q96KV7 1748 aa23.69■■□□□ 1.38
PNKP-224ENST00000631020 RPGRQ92834 1020 aaKnown RBP23.69■■□□□ 1.38
PNKP-224ENST00000631020 FRAT1Q92837 279 aaPredicted RBP23.69■■□□□ 1.38
PNKP-224ENST00000631020 CRAMP1Q96RY5 1269 aa23.69■■□□□ 1.38
PNKP-224ENST00000631020 RRAGCQ9HB90 399 aa23.69■■□□□ 1.38
PNKP-224ENST00000631020 KIF16BQ96L93 1317 aa23.68■■□□□ 1.38
PNKP-224ENST00000631020 FKBP4Q02790 459 aaKnown RBP eCLIP23.68■■□□□ 1.38
PNKP-224ENST00000631020 GRIPAP1Q4V328 841 aa23.68■■□□□ 1.38
PNKP-224ENST00000631020 NLRP10Q86W26 655 aa23.68■■□□□ 1.38
PNKP-224ENST00000631020 METTL22Q9BUU2 404 aaPredicted RBP23.68■■□□□ 1.38
PNKP-224ENST00000631020 TNNQ9UQP3 1299 aa23.68■■□□□ 1.38
PNKP-224ENST00000631020 VEGFAP15692 232 aaPredicted RBP23.67■■□□□ 1.38
PNKP-224ENST00000631020 DNAAF4Q8WXU2 420 aa23.67■■□□□ 1.38
PNKP-224ENST00000631020 ARHGAP45Q92619 1136 aa23.67■■□□□ 1.38
PNKP-224ENST00000631020 NLRP3Q96P20 1036 aa23.67■■□□□ 1.38
PNKP-224ENST00000631020 SNED1Q8TER0 1413 aa23.67■■□□□ 1.38
PNKP-224ENST00000631020 FSTL1Q12841 308 aa23.66■■□□□ 1.38
PNKP-224ENST00000631020 RBM17Q96I25 401 aaKnown RBP23.66■■□□□ 1.38
PNKP-224ENST00000631020 MYD88Q99836 296 aa23.66■■□□□ 1.38
PNKP-224ENST00000631020 ATP5J2-PTCD1G3V325 749 aa23.65■■□□□ 1.38
PNKP-224ENST00000631020 ISCA1Q9BUE6 129 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms