RNA–Protein interactions for RNA: ENST00000629930.1

SRP68-213, Transcript of signal recognition particle 68, human

TSL 5 BASIC

Gene SRP68, Length 165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRP68-213	ENST00000629930	HDGFL1	Q5TGJ6	251 aa		32.74	■■■□□ 2.83
SRP68-213	ENST00000629930	SNED1	Q8TER0	1413 aa		32.73	■■■□□ 2.83
SRP68-213	ENST00000629930	CALD1	Q05682	793 aa	Known RBP	32.72	■■■□□ 2.83
SRP68-213	ENST00000629930	AIMP1	Q12904	312 aa	Known RBP	32.72	■■■□□ 2.83
SRP68-213	ENST00000629930	DUSP27	Q5VZP5	1158 aa		32.72	■■■□□ 2.83
SRP68-213	ENST00000629930	OLFM4	Q6UX06	510 aa		32.72	■■■□□ 2.83
SRP68-213	ENST00000629930	WDR90	Q96KV7	1748 aa		32.71	■■■□□ 2.83
SRP68-213	ENST00000629930	GNAI1	P63096	354 aa		32.71	■■■□□ 2.83
SRP68-213	ENST00000629930	HSP90AB3P	Q58FF7	597 aa		32.71	■■■□□ 2.83
SRP68-213	ENST00000629930	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.71	■■■□□ 2.83
SRP68-213	ENST00000629930	RNF123	Q5XPI4	1314 aa		32.71	■■■□□ 2.83
SRP68-213	ENST00000629930	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.7	■■■□□ 2.83
SRP68-213	ENST00000629930	SLC10A5	Q5PT55	438 aa		32.7	■■■□□ 2.83
SRP68-213	ENST00000629930	C3orf67	Q6ZVT6	689 aa		32.7	■■■□□ 2.83
SRP68-213	ENST00000629930	RTKN2	Q8IZC4	609 aa		32.7	■■■□□ 2.83
SRP68-213	ENST00000629930	UTP14A	Q9BVJ6	771 aa	Known RBP	32.7	■■■□□ 2.83
SRP68-213	ENST00000629930	DBF4	Q9UBU7	674 aa	Predicted RBP	32.7	■■■□□ 2.83
SRP68-213	ENST00000629930	TCIRG1	Q13488	830 aa		32.69	■■■□□ 2.82
SRP68-213	ENST00000629930	NLRP10	Q86W26	655 aa		32.69	■■■□□ 2.82
SRP68-213	ENST00000629930	VEGFA	P15692	232 aa	Predicted RBP	32.68	■■■□□ 2.82
SRP68-213	ENST00000629930	FSTL1	Q12841	308 aa		32.68	■■■□□ 2.82
SRP68-213	ENST00000629930	DPY19L2	Q6NUT2	758 aa		32.68	■■■□□ 2.82
SRP68-213	ENST00000629930	RPGR	Q92834	1020 aa	Known RBP	32.68	■■■□□ 2.82
SRP68-213	ENST00000629930	POTEC	B2RU33	542 aa		32.67	■■■□□ 2.82
SRP68-213	ENST00000629930	CRAMP1	Q96RY5	1269 aa		32.67	■■■□□ 2.82
SRP68-213	ENST00000629930	PLBD2	Q8NHP8	589 aa		32.66	■■■□□ 2.82
SRP68-213	ENST00000629930	HYPK	Q9NX55	129 aa		32.65	■■■□□ 2.82
SRP68-213	ENST00000629930	APLP1	P51693	650 aa		32.64	■■■□□ 2.82
SRP68-213	ENST00000629930	CC2D2B	Q6DHV5	1058 aa		32.64	■■■□□ 2.82
SRP68-213	ENST00000629930	RBM17	Q96I25	401 aa	Known RBP	32.64	■■■□□ 2.82
SRP68-213	ENST00000629930	ANKRD13D	Q6ZTN6	518 aa		32.63	■■■□□ 2.81
SRP68-213	ENST00000629930	NLRP3	Q96P20	1036 aa		32.63	■■■□□ 2.81
SRP68-213	ENST00000629930	PSMD1	Q99460	953 aa		32.63	■■■□□ 2.81
SRP68-213	ENST00000629930	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.63	■■■□□ 2.81
SRP68-213	ENST00000629930	CCDC27	Q2M243	656 aa		32.62	■■■□□ 2.81
SRP68-213	ENST00000629930	LAMB2	P55268	1798 aa		32.62	■■■□□ 2.81
SRP68-213	ENST00000629930	SMC1B	Q8NDV3	1235 aa		32.6	■■■□□ 2.81
SRP68-213	ENST00000629930	ANP32C	O43423	234 aa		32.59	■■■□□ 2.81
SRP68-213	ENST00000629930	GRIPAP1	Q4V328	841 aa		32.59	■■■□□ 2.81
SRP68-213	ENST00000629930	SYNE4	Q8N205	404 aa		32.59	■■■□□ 2.81
SRP68-213	ENST00000629930	C8orf58	Q8NAV2	365 aa		32.59	■■■□□ 2.81
SRP68-213	ENST00000629930	ISCA1	Q9BUE6	129 aa		32.59	■■■□□ 2.81
SRP68-213	ENST00000629930	TRMT112	Q9UI30	125 aa	Known RBP	32.59	■■■□□ 2.81
SRP68-213	ENST00000629930	SH3TC1	Q8TE82	1336 aa		32.58	■■■□□ 2.81
SRP68-213	ENST00000629930	DDN	O94850	711 aa	Predicted RBP	32.58	■■■□□ 2.81
SRP68-213	ENST00000629930	IARS	P41252	1262 aa	Known RBP	32.58	■■■□□ 2.81
SRP68-213	ENST00000629930	NCBP3	Q53F19	620 aa	Known RBP	32.58	■■■□□ 2.81
SRP68-213	ENST00000629930	MRS2	Q9HD23	443 aa		32.58	■■■□□ 2.81
SRP68-213	ENST00000629930	ELL2	O00472	640 aa	Predicted RBP	32.57	■■■□□ 2.8
SRP68-213	ENST00000629930	PPEF1	O14829	653 aa	Predicted RBP	32.57	■■■□□ 2.8
SRP68-213	ENST00000629930	HCLS1	P14317	486 aa	Predicted RBP	32.56	■■■□□ 2.8
SRP68-213	ENST00000629930	SLC51A	Q86UW1	340 aa		32.56	■■■□□ 2.8
SRP68-213	ENST00000629930	WWC1	Q8IX03	1113 aa		32.56	■■■□□ 2.8
SRP68-213	ENST00000629930	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.56	■■■□□ 2.8
SRP68-213	ENST00000629930	ABCC4	O15439	1325 aa		32.54	■■■□□ 2.8
SRP68-213	ENST00000629930	TRIM28	Q13263	835 aa	Known RBP	32.54	■■■□□ 2.8
SRP68-213	ENST00000629930	DDX60	Q8IY21	1712 aa	Known RBP	32.54	■■■□□ 2.8
SRP68-213	ENST00000629930	ZNF541	Q9H0D2	1346 aa		32.53	■■■□□ 2.8
SRP68-213	ENST00000629930	COL4A5	P29400	1685 aa		32.53	■■■□□ 2.8
SRP68-213	ENST00000629930	FZD9	O00144	591 aa		32.53	■■■□□ 2.8
SRP68-213	ENST00000629930	PHAX	Q9H814	394 aa	Known RBP	32.53	■■■□□ 2.8
SRP68-213	ENST00000629930	DNAJC5G	Q8N7S2	189 aa		32.52	■■■□□ 2.8
SRP68-213	ENST00000629930	ATP6V0A2	Q9Y487	856 aa		32.52	■■■□□ 2.8
SRP68-213	ENST00000629930	SCN4A	P35499	1836 aa		32.51	■■■□□ 2.8
SRP68-213	ENST00000629930	ATP5J2-PTCD1	G3V325	749 aa		32.51	■■■□□ 2.79
SRP68-213	ENST00000629930	TSPYL6	Q8N831	410 aa		32.51	■■■□□ 2.79
SRP68-213	ENST00000629930	TSR2	Q969E8	191 aa	Known RBP	32.5	■■■□□ 2.79
SRP68-213	ENST00000629930	CHMP4A	Q9BY43	222 aa		32.5	■■■□□ 2.79
SRP68-213	ENST00000629930	IL16	Q14005	1332 aa		32.5	■■■□□ 2.79
SRP68-213	ENST00000629930	GOLGA2	Q08379	1002 aa		32.49	■■■□□ 2.79
SRP68-213	ENST00000629930	CCDC30	Q5VVM6	783 aa		32.49	■■■□□ 2.79
SRP68-213	ENST00000629930	TCERG1	O14776	1098 aa	Known RBP	32.48	■■■□□ 2.79
SRP68-213	ENST00000629930	BBOX1	O75936	387 aa		32.48	■■■□□ 2.79
SRP68-213	ENST00000629930	ZNF428	Q96B54	188 aa		32.48	■■■□□ 2.79
SRP68-213	ENST00000629930	FAM89A	Q96GI7	184 aa		32.48	■■■□□ 2.79
SRP68-213	ENST00000629930	RIC3	Q7Z5B4	369 aa		32.47	■■■□□ 2.79
SRP68-213	ENST00000629930	JDP2	Q8WYK2	163 aa		32.47	■■■□□ 2.79
SRP68-213	ENST00000629930	IQCA1L	A6NCM1	817 aa		32.46	■■■□□ 2.79
SRP68-213	ENST00000629930	DDX46	Q7L014	1031 aa	Known RBP	32.46	■■■□□ 2.79
SRP68-213	ENST00000629930	TAF1	P21675	1872 aa		32.46	■■■□□ 2.79
SRP68-213	ENST00000629930	GRAP	Q13588	217 aa		32.45	■■■□□ 2.79
SRP68-213	ENST00000629930	SF3B3	Q15393	1217 aa	Known RBP	32.45	■■■□□ 2.79
SRP68-213	ENST00000629930	SP8	Q8IXZ3	490 aa		32.45	■■■□□ 2.79
SRP68-213	ENST00000629930	GRAPL	Q8TC17	118 aa	Predicted RBP	32.45	■■■□□ 2.79
SRP68-213	ENST00000629930	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.45	■■■□□ 2.79
SRP68-213	ENST00000629930	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.44	■■■□□ 2.78
SRP68-213	ENST00000629930	POTEI	P0CG38	1075 aa		32.43	■■■□□ 2.78
SRP68-213	ENST00000629930	POTEJ	P0CG39	1038 aa		32.43	■■■□□ 2.78
SRP68-213	ENST00000629930	HTRA3	P83110	453 aa		32.43	■■■□□ 2.78
SRP68-213	ENST00000629930	GPC2	Q8N158	579 aa		32.43	■■■□□ 2.78
SRP68-213	ENST00000629930	TMX4	Q9H1E5	349 aa	Predicted RBP	32.43	■■■□□ 2.78
SRP68-213	ENST00000629930	VPS33B	Q9H267	617 aa		32.43	■■■□□ 2.78
SRP68-213	ENST00000629930	LRRC37A	A6NMS7	1700 aa		32.43	■■■□□ 2.78
SRP68-213	ENST00000629930	LARGE2	Q8N3Y3	721 aa		32.42	■■■□□ 2.78
SRP68-213	ENST00000629930	CHADL	Q6NUI6	762 aa		32.41	■■■□□ 2.78
SRP68-213	ENST00000629930	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.41	■■■□□ 2.78
SRP68-213	ENST00000629930	TMC4	Q7Z404	712 aa		32.4	■■■□□ 2.78
SRP68-213	ENST00000629930	CCDC191	Q8NCU4	936 aa		32.4	■■■□□ 2.78
SRP68-213	ENST00000629930	MYD88	Q99836	296 aa		32.4	■■■□□ 2.78
SRP68-213	ENST00000629930	IRS4	O14654	1257 aa	Predicted RBP	32.39	■■■□□ 2.78

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