RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 FBLN7Q53RD9 439 aa3.23□□□□□ -1.89
SPTAN1-216ENST00000629047 ZNF648Q5T619 568 aaPredicted RBP3.23□□□□□ -1.89
SPTAN1-216ENST00000629047 DTX1Q86Y01 620 aa3.23□□□□□ -1.89
SPTAN1-216ENST00000629047 L3MBTL2Q969R5 705 aa3.23□□□□□ -1.89
SPTAN1-216ENST00000629047 SLC4A9Q96Q91 983 aa3.23□□□□□ -1.89
SPTAN1-216ENST00000629047 LPIN3Q9BQK8 851 aa3.23□□□□□ -1.89
SPTAN1-216ENST00000629047 KRTAP9-3Q9BYQ3 159 aa3.23□□□□□ -1.89
SPTAN1-216ENST00000629047 AKTIPQ9H8T0 292 aa3.23□□□□□ -1.89
SPTAN1-216ENST00000629047 SFI1A8K8P3 1242 aa3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 F8W735 103 aaPredicted RBP3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 DLL1O00548 723 aa3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 HOXA10P31260 410 aaPredicted RBP3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 MLLT1Q03111 559 aaPredicted RBP3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 COL19A1Q14993 1142 aa3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 NFXL1Q6ZNB6 911 aa3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 POU5F2Q8N7G0 328 aa3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 RHPN1Q8TCX5 695 aa3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 UBL7Q96S82 380 aaPredicted RBP3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 KCNH4Q9UQ05 1017 aa3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 RAXQ9Y2V3 346 aa3.22□□□□□ -1.89
SPTAN1-216ENST00000629047 CENPBP07199 599 aaPredicted RBP3.21□□□□□ -1.9
SPTAN1-216ENST00000629047 ZNF865P0CJ78 1059 aaPredicted RBP3.21□□□□□ -1.9
SPTAN1-216ENST00000629047 NOS2P35228 1153 aa3.21□□□□□ -1.9
SPTAN1-216ENST00000629047 BRPF1P55201 1214 aaPredicted RBP3.21□□□□□ -1.9
SPTAN1-216ENST00000629047 PERM1Q5SV97 790 aa3.21□□□□□ -1.9
SPTAN1-216ENST00000629047 IGF2-ASQ6U949 168 aa3.21□□□□□ -1.9
SPTAN1-216ENST00000629047 SLC9A9Q8IVB4 645 aa3.21□□□□□ -1.9
SPTAN1-216ENST00000629047 ARMC10Q8N2F6 343 aa3.21□□□□□ -1.9
SPTAN1-216ENST00000629047 MTMR14Q8NCE2 650 aa3.21□□□□□ -1.9
SPTAN1-216ENST00000629047 COL26A1Q96A83 441 aa3.21□□□□□ -1.9
SPTAN1-216ENST00000629047 HMX2A2RU54 273 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 ZBTB42B2RXF5 422 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 PTCD1O75127 700 aaKnown RBP3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 WISP1O95388 367 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 WNT11O96014 354 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 GLB1P16278 677 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 NFKB1P19838 968 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 GRNP28799 593 aaKnown RBP3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 ZEB1P37275 1124 aaPredicted RBP3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 EPHA4P54764 986 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 KCNQ4P56696 695 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 NEUROD1Q13562 356 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 Q6ZS46 218 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 FAM35AQ86V20 835 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 WFDC8Q8IUA0 241 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 TRIM42Q8IWZ5 723 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 DTWD1Q8N5C7 304 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 KDM4CQ9H3R0 1056 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 C7orf69Q9H7B7 122 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 SCHIP1Q9P0W5 487 aaPredicted RBP3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 CHIC2Q9UKJ5 165 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 ZNF232Q9UNY5 417 aa3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 ZNF330Q9Y3S2 320 aaPredicted RBP3.2□□□□□ -1.9
SPTAN1-216ENST00000629047 NFIAQ12857 509 aa3.19□□□□□ -1.9
SPTAN1-216ENST00000629047 TEAD4Q15561 434 aa3.19□□□□□ -1.9
SPTAN1-216ENST00000629047 SLFNL1Q499Z3 407 aa3.19□□□□□ -1.9
SPTAN1-216ENST00000629047 TNS4Q8IZW8 715 aa3.19□□□□□ -1.9
SPTAN1-216ENST00000629047 NEUROD4Q9HD90 331 aa3.19□□□□□ -1.9
SPTAN1-216ENST00000629047 ZNF358Q9NW07 568 aa3.19□□□□□ -1.9
SPTAN1-216ENST00000629047 STOML1Q9UBI4 398 aa3.19□□□□□ -1.9
SPTAN1-216ENST00000629047 HCN4Q9Y3Q4 1203 aa3.19□□□□□ -1.9
SPTAN1-216ENST00000629047 PCDHGA11Q9Y5H2 935 aa3.19□□□□□ -1.9
SPTAN1-216ENST00000629047 HFE2Q6ZVN8 426 aa3.18□□□□□ -1.9
SPTAN1-216ENST00000629047 CBLL1Q75N03 491 aa3.18□□□□□ -1.9
SPTAN1-216ENST00000629047 SHKBP1Q8TBC3 707 aa3.18□□□□□ -1.9
SPTAN1-216ENST00000629047 SUSD3Q96L08 255 aa3.18□□□□□ -1.9
SPTAN1-216ENST00000629047 PHACTR1Q9C0D0 580 aa3.18□□□□□ -1.9
SPTAN1-216ENST00000629047 ZFATQ9P243 1243 aa3.18□□□□□ -1.9
SPTAN1-216ENST00000629047 PIK3CDO00329 1044 aa3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 ITGB5P18084 799 aa3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 TMEM259Q4ZIN3 620 aa3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 KRT25Q7Z3Z0 450 aa3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 SLC51AQ86UW1 340 aa3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 SHISA5Q8N114 240 aa3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 PLPP7Q8NBV4 271 aa3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 GSX2Q9BZM3 304 aa3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 SMG9Q9H0W8 520 aaKnown RBP3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 SNRKQ9NRH2 765 aa3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 NDUFB9Q9Y6M9 179 aa3.17□□□□□ -1.9
SPTAN1-216ENST00000629047 SERTM1A2A2V5 107 aa3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 GSC2O15499 205 aa3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 GRIK1P39086 918 aa3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 BUD31P41223 144 aaPredicted RBP3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 IRF5Q13568 498 aa3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 INTS5Q6P9B9 1019 aaKnown RBP3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 ELMSAN1Q6PJG2 1045 aa3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 BTLAQ7Z6A9 289 aa3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 ZNF592Q92610 1267 aa3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 MRPL18Q9H0U6 180 aaKnown RBP3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 KCNK4Q9NYG8 393 aa3.16□□□□□ -1.9
SPTAN1-216ENST00000629047 SETDB1Q15047 1291 aa3.15□□□□□ -1.91
SPTAN1-216ENST00000629047 RNF43Q68DV7 783 aa3.15□□□□□ -1.91
SPTAN1-216ENST00000629047 TMEM130Q8N3G9 435 aa3.15□□□□□ -1.91
SPTAN1-216ENST00000629047 GALNT11Q8NCW6 608 aa3.15□□□□□ -1.91
SPTAN1-216ENST00000629047 DDRGK1Q96HY6 314 aa3.15□□□□□ -1.91
SPTAN1-216ENST00000629047 DBNDD2Q9BQY9 259 aa3.15□□□□□ -1.91
SPTAN1-216ENST00000629047 TSPAN10Q9H1Z9 355 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms